RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 SEC61BP60468 96 aaKnown RBP10.18□□□□□ -0.78
GMDS-208ENST00000530927 ATP5EP2Q5VTU8 51 aa10.18□□□□□ -0.78
GMDS-208ENST00000530927 FAT4Q6V0I7 4981 aa10.17□□□□□ -0.78
GMDS-208ENST00000530927 SS18L2Q9UHA2 77 aa10.16□□□□□ -0.78
GMDS-208ENST00000530927 A0A087WSZ3 146 aa10.15□□□□□ -0.79
GMDS-208ENST00000530927 A0A1B0GW54 56 aa10.15□□□□□ -0.79
GMDS-208ENST00000530927 LINC00846Q9NV44 126 aa10.15□□□□□ -0.79
GMDS-208ENST00000530927 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
GMDS-208ENST00000530927 A0A0U1RQV1 116 aa10.11□□□□□ -0.79
GMDS-208ENST00000530927 UBL5Q9BZL1 73 aa10.09□□□□□ -0.79
GMDS-208ENST00000530927 HIST1H4AP62805 103 aaKnown RBP10.08□□□□□ -0.8
GMDS-208ENST00000530927 FAM236AA0A1B0GUQ0 79 aa10.07□□□□□ -0.8
GMDS-208ENST00000530927 FAM236BA0A1B0GV22 79 aa10.07□□□□□ -0.8
GMDS-208ENST00000530927 KRTAP3-3Q9BYR6 98 aa10.06□□□□□ -0.8
GMDS-208ENST00000530927 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
GMDS-208ENST00000530927 LCE2AQ5TA79 106 aaPredicted RBP10.05□□□□□ -0.8
GMDS-208ENST00000530927 ATOX1O00244 68 aa10.04□□□□□ -0.8
GMDS-208ENST00000530927 Q96NJ1 140 aa10.04□□□□□ -0.8
GMDS-208ENST00000530927 RPL37P61927 97 aaKnown RBP10.02□□□□□ -0.81
GMDS-208ENST00000530927 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
GMDS-208ENST00000530927 CXCL6P80162 114 aa9.99□□□□□ -0.81
GMDS-208ENST00000530927 NREPQ16612 68 aa9.99□□□□□ -0.81
GMDS-208ENST00000530927 LINC00472Q9H8W2 130 aa9.99□□□□□ -0.81
GMDS-208ENST00000530927 UQCRQO14949 82 aa9.98□□□□□ -0.81
GMDS-208ENST00000530927 Q6ZVQ6 151 aa9.95□□□□□ -0.82
GMDS-208ENST00000530927 CCDC179H3BU77 68 aa9.94□□□□□ -0.82
GMDS-208ENST00000530927 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
GMDS-208ENST00000530927 DEFB116Q30KQ4 102 aa9.94□□□□□ -0.82
GMDS-208ENST00000530927 J3KT08 172 aa9.93□□□□□ -0.82
GMDS-208ENST00000530927 COX7CP15954 63 aa9.93□□□□□ -0.82
GMDS-208ENST00000530927 KRTAP19-2Q3LHN2 52 aa9.92□□□□□ -0.82
GMDS-208ENST00000530927 DSCR10P59022 87 aa9.91□□□□□ -0.82
GMDS-208ENST00000530927 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
GMDS-208ENST00000530927 SERP2Q8N6R1 65 aa9.9□□□□□ -0.83
GMDS-208ENST00000530927 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
GMDS-208ENST00000530927 Q75L30 129 aa9.88□□□□□ -0.83
GMDS-208ENST00000530927 A0A087WVE0 104 aa9.85□□□□□ -0.83
GMDS-208ENST00000530927 BPY2O14599 106 aa9.85□□□□□ -0.83
GMDS-208ENST00000530927 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
GMDS-208ENST00000530927 NDUFB1O75438 58 aa9.83□□□□□ -0.84
GMDS-208ENST00000530927 A8MWP4 228 aa9.82□□□□□ -0.84
GMDS-208ENST00000530927 C20orf166-AS1Q96NR2 134 aa9.82□□□□□ -0.84
GMDS-208ENST00000530927 A0A1B0GVX0 72 aa9.81□□□□□ -0.84
GMDS-208ENST00000530927 A8MUU9 505 aa9.81□□□□□ -0.84
GMDS-208ENST00000530927 ATP11AUNQ6ZP68 121 aa9.81□□□□□ -0.84
GMDS-208ENST00000530927 IGHV6-1A0A0B4J1U7 121 aa9.79□□□□□ -0.84
GMDS-208ENST00000530927 KRTAP16-1A8MUX0 517 aa9.79□□□□□ -0.84
GMDS-208ENST00000530927 LINC00313P59037 77 aa9.78□□□□□ -0.84
GMDS-208ENST00000530927 TRAV7A0A075B6U4 112 aa9.77□□□□□ -0.85
GMDS-208ENST00000530927 PRR15Q8IV56 129 aa9.76□□□□□ -0.85
GMDS-208ENST00000530927 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
GMDS-208ENST00000530927 MT1HP80294 61 aa9.75□□□□□ -0.85
GMDS-208ENST00000530927 K7EQZ3 153 aa9.73□□□□□ -0.85
GMDS-208ENST00000530927 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
GMDS-208ENST00000530927 TMEM258P61165 79 aa9.69□□□□□ -0.86
GMDS-208ENST00000530927 Q8N9L7 120 aa9.69□□□□□ -0.86
GMDS-208ENST00000530927 FLGP20930 4061 aaPredicted RBP9.68□□□□□ -0.86
GMDS-208ENST00000530927 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
GMDS-208ENST00000530927 KRTAP9-2Q9BYQ4 174 aa9.66□□□□□ -0.86
GMDS-208ENST00000530927 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
GMDS-208ENST00000530927 KLKP1Q107X0 134 aa9.64□□□□□ -0.87
GMDS-208ENST00000530927 NDUFC1O43677 76 aa9.61□□□□□ -0.87
GMDS-208ENST00000530927 RPS28P62857 69 aaKnown RBP9.61□□□□□ -0.87
GMDS-208ENST00000530927 hDV103S1A0JD37 113 aa9.6□□□□□ -0.87
GMDS-208ENST00000530927 TMEM254Q8TBM7 123 aa9.6□□□□□ -0.87
GMDS-208ENST00000530927 CASC2Q6XLA1 102 aa9.58□□□□□ -0.88
GMDS-208ENST00000530927 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
GMDS-208ENST00000530927 C20orf197Q8N268 126 aa9.57□□□□□ -0.88
GMDS-208ENST00000530927 MRPL34Q9BQ48 92 aaKnown RBP9.57□□□□□ -0.88
GMDS-208ENST00000530927 WFDC13Q8IUB5 93 aa9.56□□□□□ -0.88
GMDS-208ENST00000530927 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
GMDS-208ENST00000530927 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
GMDS-208ENST00000530927 M0R2T5 61 aa9.54□□□□□ -0.88
GMDS-208ENST00000530927 CYSTM1Q9H1C7 97 aa9.54□□□□□ -0.88
GMDS-208ENST00000530927 KRTAP10-6P60371 365 aaPredicted RBP9.53□□□□□ -0.88
GMDS-208ENST00000530927 LORP23490 312 aaPredicted RBP9.51□□□□□ -0.89
GMDS-208ENST00000530927 ATP5EP56381 51 aaPredicted RBP9.5□□□□□ -0.89
GMDS-208ENST00000530927 H7BZZ5 65 aa9.49□□□□□ -0.89
GMDS-208ENST00000530927 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
GMDS-208ENST00000530927 NDUFS5O43920 106 aa9.48□□□□□ -0.89
GMDS-208ENST00000530927 HRES1P13985 223 aa9.48□□□□□ -0.89
GMDS-208ENST00000530927 FAM236DA0A1B0GTK5 79 aa9.46□□□□□ -0.9
GMDS-208ENST00000530927 FAM236CP0DP71 79 aa9.46□□□□□ -0.9
GMDS-208ENST00000530927 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
GMDS-208ENST00000530927 MPLKIPQ8TAP9 179 aa9.43□□□□□ -0.9
GMDS-208ENST00000530927 SNURFQ9Y675 71 aa9.4□□□□□ -0.9
GMDS-208ENST00000530927 SPINK7P58062 85 aa9.39□□□□□ -0.91
GMDS-208ENST00000530927 TP53AIP1Q9HCN2 124 aa9.39□□□□□ -0.91
GMDS-208ENST00000530927 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
GMDS-208ENST00000530927 H3BPC8 53 aa9.35□□□□□ -0.91
GMDS-208ENST00000530927 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
GMDS-208ENST00000530927 Q5W150 140 aa9.31□□□□□ -0.92
GMDS-208ENST00000530927 MP68P56378 58 aa9.31□□□□□ -0.92
GMDS-208ENST00000530927 KRTAP9-6A0A140TA67 174 aa9.27□□□□□ -0.93
GMDS-208ENST00000530927 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
GMDS-208ENST00000530927 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
GMDS-208ENST00000530927 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.93
GMDS-208ENST00000530927 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
GMDS-208ENST00000530927 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
GMDS-208ENST00000530927 H0Y9P7 68 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms