RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 A0A1W2PPM0 123 aa9.05□□□□□ -0.96
USP35-202ENST00000528910 PDE6GP18545 87 aa9.05□□□□□ -0.96
USP35-202ENST00000528910 MT1HP80294 61 aa9.05□□□□□ -0.96
USP35-202ENST00000528910 GTF2H5Q6ZYL4 71 aa9.04□□□□□ -0.96
USP35-202ENST00000528910 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
USP35-202ENST00000528910 C14orf132Q9NPU4 83 aa9.03□□□□□ -0.96
USP35-202ENST00000528910 A0A1B0GVX0 72 aa9.02□□□□□ -0.97
USP35-202ENST00000528910 H3BT86 120 aa9.02□□□□□ -0.97
USP35-202ENST00000528910 J3KT08 172 aa9.02□□□□□ -0.97
USP35-202ENST00000528910 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
USP35-202ENST00000528910 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
USP35-202ENST00000528910 SPCS1Q9Y6A9 102 aa8.98□□□□□ -0.97
USP35-202ENST00000528910 COX6B2Q6YFQ2 88 aa8.96□□□□□ -0.98
USP35-202ENST00000528910 MTURNQ8N3F0 131 aa8.96□□□□□ -0.98
USP35-202ENST00000528910 A0A1B0GV90 55 aa8.95□□□□□ -0.98
USP35-202ENST00000528910 K7EP34 96 aa8.95□□□□□ -0.98
USP35-202ENST00000528910 A8MWP4 228 aa8.92□□□□□ -0.98
USP35-202ENST00000528910 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
USP35-202ENST00000528910 NDUFB1O75438 58 aa8.91□□□□□ -0.98
USP35-202ENST00000528910 F8W1H4 67 aa8.9□□□□□ -0.98
USP35-202ENST00000528910 IGKV3D-7A0A0C4DH55 119 aa8.88□□□□□ -0.99
USP35-202ENST00000528910 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
USP35-202ENST00000528910 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
USP35-202ENST00000528910 NREPQ16612 68 aa8.86□□□□□ -0.99
USP35-202ENST00000528910 Q8N9P0 234 aaPredicted RBP8.86□□□□□ -0.99
USP35-202ENST00000528910 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
USP35-202ENST00000528910 KRTAP10-6P60371 365 aaPredicted RBP8.85□□□□□ -0.99
USP35-202ENST00000528910 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
USP35-202ENST00000528910 PRO0461Q9UI25 63 aa8.83□□□□□ -1
USP35-202ENST00000528910 LCE2DQ5TA82 110 aaPredicted RBP8.82□□□□□ -1
USP35-202ENST00000528910 ZCCHC13Q8WW36 166 aaKnown RBP8.82□□□□□ -1
USP35-202ENST00000528910 KRTAP9-6A0A140TA67 174 aa8.81□□□□□ -1
USP35-202ENST00000528910 M0R2T5 61 aa8.81□□□□□ -1
USP35-202ENST00000528910 HRES1P13985 223 aa8.8□□□□□ -1
USP35-202ENST00000528910 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
USP35-202ENST00000528910 MMP24-AS1A0A0U1RRL7 71 aa8.78□□□□□ -1
USP35-202ENST00000528910 Q6ZVQ6 151 aa8.78□□□□□ -1
USP35-202ENST00000528910 K7EQZ3 153 aa8.76□□□□□ -1.01
USP35-202ENST00000528910 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
USP35-202ENST00000528910 BPY2O14599 106 aa8.73□□□□□ -1.01
USP35-202ENST00000528910 MRPL34Q9BQ48 92 aaKnown RBP8.72□□□□□ -1.01
USP35-202ENST00000528910 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
USP35-202ENST00000528910 SPINK7P58062 85 aa8.7□□□□□ -1.02
USP35-202ENST00000528910 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
USP35-202ENST00000528910 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
USP35-202ENST00000528910 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
USP35-202ENST00000528910 J3QR89 54 aa8.68□□□□□ -1.02
USP35-202ENST00000528910 ETDBQ3ZM63 59 aa8.67□□□□□ -1.02
USP35-202ENST00000528910 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
USP35-202ENST00000528910 FSIP2Q5CZC0 6907 aa8.66□□□□□ -1.02
USP35-202ENST00000528910 Q8N9L7 120 aa8.63□□□□□ -1.03
USP35-202ENST00000528910 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
USP35-202ENST00000528910 CRCT1Q9UGL9 99 aa8.61□□□□□ -1.03
USP35-202ENST00000528910 K7ERU9 68 aa8.6□□□□□ -1.03
USP35-202ENST00000528910 NDUFS5O43920 106 aa8.59□□□□□ -1.03
USP35-202ENST00000528910 WFDC13Q8IUB5 93 aa8.59□□□□□ -1.03
USP35-202ENST00000528910 ACYP1P07311 99 aa8.58□□□□□ -1.04
USP35-202ENST00000528910 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
USP35-202ENST00000528910 KRTAP9-8Q9BYQ0 159 aa8.58□□□□□ -1.04
USP35-202ENST00000528910 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
USP35-202ENST00000528910 Q5W150 140 aa8.53□□□□□ -1.04
USP35-202ENST00000528910 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
USP35-202ENST00000528910 CXCL6P80162 114 aa8.49□□□□□ -1.05
USP35-202ENST00000528910 C7orf65Q6ZTY9 151 aa8.49□□□□□ -1.05
USP35-202ENST00000528910 MT2AP02795 61 aa8.47□□□□□ -1.05
USP35-202ENST00000528910 IGKV2D-30A0A075B6S6 120 aa8.45□□□□□ -1.06
USP35-202ENST00000528910 IGKV2-30P06310 120 aa8.45□□□□□ -1.06
USP35-202ENST00000528910 MT1FP04733 61 aa8.41□□□□□ -1.06
USP35-202ENST00000528910 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
USP35-202ENST00000528910 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
USP35-202ENST00000528910 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
USP35-202ENST00000528910 ATP5EP2Q5VTU8 51 aa8.34□□□□□ -1.07
USP35-202ENST00000528910 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
USP35-202ENST00000528910 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
USP35-202ENST00000528910 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
USP35-202ENST00000528910 USH2AO75445 5202 aa8.29□□□□□ -1.08
USP35-202ENST00000528910 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
USP35-202ENST00000528910 LCE2BO14633 110 aa8.24□□□□□ -1.09
USP35-202ENST00000528910 SSPOA2VEC9 5147 aa8.21□□□□□ -1.09
USP35-202ENST00000528910 KRTAP3-1Q9BYR8 98 aa8.21□□□□□ -1.1
USP35-202ENST00000528910 TRAV22A0A0B4J277 110 aa8.2□□□□□ -1.1
USP35-202ENST00000528910 HIST1H4AP62805 103 aaKnown RBP8.2□□□□□ -1.1
USP35-202ENST00000528910 C1orf64Q8NEQ6 169 aa8.17□□□□□ -1.1
USP35-202ENST00000528910 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
USP35-202ENST00000528910 LOC101927531A0A1B0GV80 90 aa8.14□□□□□ -1.11
USP35-202ENST00000528910 A0A087WVE0 104 aa8.13□□□□□ -1.11
USP35-202ENST00000528910 UQCRQO14949 82 aa8.13□□□□□ -1.11
USP35-202ENST00000528910 MT-ATP8P03928 68 aa8.12□□□□□ -1.11
USP35-202ENST00000528910 S4R3F8 94 aa8.12□□□□□ -1.11
USP35-202ENST00000528910 ATOX1O00244 68 aa8.08□□□□□ -1.12
USP35-202ENST00000528910 C5orf47Q569G3 176 aa8.08□□□□□ -1.12
USP35-202ENST00000528910 H0Y9P7 68 aa8.07□□□□□ -1.12
USP35-202ENST00000528910 LCA10Q71F78 164 aa8.07□□□□□ -1.12
USP35-202ENST00000528910 SCGB1A1P11684 91 aa8.06□□□□□ -1.12
USP35-202ENST00000528910 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
USP35-202ENST00000528910 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
USP35-202ENST00000528910 CSAG1Q6PB30 78 aa8.03□□□□□ -1.12
USP35-202ENST00000528910 FCGBPQ9Y6R7 5405 aaPredicted RBP8.03□□□□□ -1.12
USP35-202ENST00000528910 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
USP35-202ENST00000528910 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms