RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 C9JAW5 83 aa6.32□□□□□ -1.4
TRAPPC4-209ENST00000528230 VPS25Q9BRG1 176 aa6.32□□□□□ -1.4
TRAPPC4-209ENST00000528230 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
TRAPPC4-209ENST00000528230 LYRM7Q5U5X0 104 aa6.31□□□□□ -1.4
TRAPPC4-209ENST00000528230 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
TRAPPC4-209ENST00000528230 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
TRAPPC4-209ENST00000528230 TRBV20-1A0A075B6N2 111 aa6.29□□□□□ -1.4
TRAPPC4-209ENST00000528230 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
TRAPPC4-209ENST00000528230 A0A1B0GW54 56 aa6.29□□□□□ -1.4
TRAPPC4-209ENST00000528230 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
TRAPPC4-209ENST00000528230 DEFB116Q30KQ4 102 aa6.29□□□□□ -1.4
TRAPPC4-209ENST00000528230 PDE6GP18545 87 aa6.28□□□□□ -1.4
TRAPPC4-209ENST00000528230 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
TRAPPC4-209ENST00000528230 J3KT08 172 aa6.27□□□□□ -1.41
TRAPPC4-209ENST00000528230 Q6ZQT0 140 aa6.27□□□□□ -1.41
TRAPPC4-209ENST00000528230 NOTCH2NLQ7Z3S9 236 aa6.27□□□□□ -1.41
TRAPPC4-209ENST00000528230 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
TRAPPC4-209ENST00000528230 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
TRAPPC4-209ENST00000528230 A0A1B0GVX0 72 aa6.25□□□□□ -1.41
TRAPPC4-209ENST00000528230 BATFQ16520 125 aa6.25□□□□□ -1.41
TRAPPC4-209ENST00000528230 C9orf118A6NHY6 69 aa6.23□□□□□ -1.41
TRAPPC4-209ENST00000528230 M0R2T5 61 aa6.22□□□□□ -1.41
TRAPPC4-209ENST00000528230 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC4-209ENST00000528230 NDUFB1O75438 58 aa6.21□□□□□ -1.42
TRAPPC4-209ENST00000528230 C14orf132Q9NPU4 83 aa6.21□□□□□ -1.42
TRAPPC4-209ENST00000528230 TAX1BP3O14907 124 aa6.2□□□□□ -1.42
TRAPPC4-209ENST00000528230 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
TRAPPC4-209ENST00000528230 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
TRAPPC4-209ENST00000528230 H3BT86 120 aa6.19□□□□□ -1.42
TRAPPC4-209ENST00000528230 A8MWP4 228 aa6.17□□□□□ -1.42
TRAPPC4-209ENST00000528230 NREPQ16612 68 aa6.15□□□□□ -1.42
TRAPPC4-209ENST00000528230 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC4-209ENST00000528230 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
TRAPPC4-209ENST00000528230 C8orf17Q9NRJ1 99 aa6.14□□□□□ -1.43
TRAPPC4-209ENST00000528230 IGKV3D-7A0A0C4DH55 119 aa6.13□□□□□ -1.43
TRAPPC4-209ENST00000528230 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
TRAPPC4-209ENST00000528230 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC4-209ENST00000528230 HRES1P13985 223 aa6.12□□□□□ -1.43
TRAPPC4-209ENST00000528230 PRR15Q8IV56 129 aa6.12□□□□□ -1.43
TRAPPC4-209ENST00000528230 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
TRAPPC4-209ENST00000528230 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
TRAPPC4-209ENST00000528230 MTURNQ8N3F0 131 aa6.1□□□□□ -1.43
TRAPPC4-209ENST00000528230 SPCS1Q9Y6A9 102 aa6.1□□□□□ -1.43
TRAPPC4-209ENST00000528230 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
TRAPPC4-209ENST00000528230 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
TRAPPC4-209ENST00000528230 Q6ZVQ6 151 aa6.09□□□□□ -1.43
TRAPPC4-209ENST00000528230 COL5A1-AS1Q5SY13 56 aa6.08□□□□□ -1.44
TRAPPC4-209ENST00000528230 SPINK7P58062 85 aa6.07□□□□□ -1.44
TRAPPC4-209ENST00000528230 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
TRAPPC4-209ENST00000528230 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
TRAPPC4-209ENST00000528230 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
TRAPPC4-209ENST00000528230 BPY2O14599 106 aa6.04□□□□□ -1.44
TRAPPC4-209ENST00000528230 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
TRAPPC4-209ENST00000528230 K7EQZ3 153 aa6.03□□□□□ -1.44
TRAPPC4-209ENST00000528230 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
TRAPPC4-209ENST00000528230 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
TRAPPC4-209ENST00000528230 PRO0461Q9UI25 63 aa6.01□□□□□ -1.45
TRAPPC4-209ENST00000528230 K7EP34 96 aa6□□□□□ -1.45
TRAPPC4-209ENST00000528230 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
TRAPPC4-209ENST00000528230 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
TRAPPC4-209ENST00000528230 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
TRAPPC4-209ENST00000528230 NDUFS5O43920 106 aa5.96□□□□□ -1.46
TRAPPC4-209ENST00000528230 GTF2H5Q6ZYL4 71 aa5.96□□□□□ -1.46
TRAPPC4-209ENST00000528230 WFDC13Q8IUB5 93 aa5.96□□□□□ -1.46
TRAPPC4-209ENST00000528230 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
TRAPPC4-209ENST00000528230 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
TRAPPC4-209ENST00000528230 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
TRAPPC4-209ENST00000528230 F8W1H4 67 aa5.93□□□□□ -1.46
TRAPPC4-209ENST00000528230 Q8N9L7 120 aa5.93□□□□□ -1.46
TRAPPC4-209ENST00000528230 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
TRAPPC4-209ENST00000528230 H3BS24 57 aa5.92□□□□□ -1.46
TRAPPC4-209ENST00000528230 MT2AP02795 61 aa5.92□□□□□ -1.46
TRAPPC4-209ENST00000528230 PCP4L1A6NKN8 68 aa5.91□□□□□ -1.46
TRAPPC4-209ENST00000528230 Q5W150 140 aa5.91□□□□□ -1.46
TRAPPC4-209ENST00000528230 HCG22E2RYF7 251 aa5.89□□□□□ -1.47
TRAPPC4-209ENST00000528230 CXCL6P80162 114 aa5.88□□□□□ -1.47
TRAPPC4-209ENST00000528230 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
TRAPPC4-209ENST00000528230 MT1FP04733 61 aa5.87□□□□□ -1.47
TRAPPC4-209ENST00000528230 ETDBQ3ZM63 59 aa5.87□□□□□ -1.47
TRAPPC4-209ENST00000528230 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
TRAPPC4-209ENST00000528230 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
TRAPPC4-209ENST00000528230 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
TRAPPC4-209ENST00000528230 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
TRAPPC4-209ENST00000528230 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
TRAPPC4-209ENST00000528230 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
TRAPPC4-209ENST00000528230 KRTAP9-7A8MTY7 169 aa5.82□□□□□ -1.48
TRAPPC4-209ENST00000528230 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
TRAPPC4-209ENST00000528230 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
TRAPPC4-209ENST00000528230 ACYP1P07311 99 aa5.78□□□□□ -1.48
TRAPPC4-209ENST00000528230 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
TRAPPC4-209ENST00000528230 FAM240AA0A1B0GVK7 77 aa5.74□□□□□ -1.49
TRAPPC4-209ENST00000528230 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
TRAPPC4-209ENST00000528230 ATP5EP2Q5VTU8 51 aa5.7□□□□□ -1.5
TRAPPC4-209ENST00000528230 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
TRAPPC4-209ENST00000528230 C1orf64Q8NEQ6 169 aa5.68□□□□□ -1.5
TRAPPC4-209ENST00000528230 USH2AO75445 5202 aa5.67□□□□□ -1.5
TRAPPC4-209ENST00000528230 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
TRAPPC4-209ENST00000528230 TRAV22A0A0B4J277 110 aa5.65□□□□□ -1.5
TRAPPC4-209ENST00000528230 HIST1H4AP62805 103 aaKnown RBP5.64□□□□□ -1.51
TRAPPC4-209ENST00000528230 S4R3F8 94 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms