RNA–Protein interactions for RNA: ENST00000527622.5

CTTN-211, Transcript of cortactin, humanhuman

TSL 4

Gene CTTN, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-211ENST00000527622 RBM3P98179 157 aaKnown RBP9.32□□□□□ -0.92
CTTN-211ENST00000527622 VPS25Q9BRG1 176 aa9.31□□□□□ -0.92
CTTN-211ENST00000527622 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
CTTN-211ENST00000527622 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
CTTN-211ENST00000527622 LCE2BO14633 110 aa9.28□□□□□ -0.92
CTTN-211ENST00000527622 DSCR8Q96T75 97 aa9.28□□□□□ -0.92
CTTN-211ENST00000527622 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
CTTN-211ENST00000527622 SCGB1C2P0DMR2 95 aa9.26□□□□□ -0.93
CTTN-211ENST00000527622 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
CTTN-211ENST00000527622 BAALC-AS2P0C853 105 aa9.25□□□□□ -0.93
CTTN-211ENST00000527622 Q6ZQT0 140 aa9.25□□□□□ -0.93
CTTN-211ENST00000527622 J3KT08 172 aa9.23□□□□□ -0.93
CTTN-211ENST00000527622 Q8N9P0 234 aaPredicted RBP9.23□□□□□ -0.93
CTTN-211ENST00000527622 TMA7Q9Y2S6 64 aaKnown RBP9.23□□□□□ -0.93
CTTN-211ENST00000527622 C9JAW5 83 aa9.22□□□□□ -0.93
CTTN-211ENST00000527622 KRTAP9-7A8MTY7 169 aa9.2□□□□□ -0.94
CTTN-211ENST00000527622 SPINK7P58062 85 aa9.2□□□□□ -0.94
CTTN-211ENST00000527622 C21orf62-AS1Q17RA5 79 aa9.2□□□□□ -0.94
CTTN-211ENST00000527622 KRTAP10-10P60014 251 aa9.19□□□□□ -0.94
CTTN-211ENST00000527622 LOC110117498A0A087WWA1 95 aa9.16□□□□□ -0.94
CTTN-211ENST00000527622 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
CTTN-211ENST00000527622 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
CTTN-211ENST00000527622 A8MWP4 228 aa9.15□□□□□ -0.94
CTTN-211ENST00000527622 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.94
CTTN-211ENST00000527622 IGKV3D-7A0A0C4DH55 119 aa9.14□□□□□ -0.95
CTTN-211ENST00000527622 A0A1B0GW54 56 aa9.12□□□□□ -0.95
CTTN-211ENST00000527622 JMJD7-PLA2G4BH0Y9G9 81 aa9.12□□□□□ -0.95
CTTN-211ENST00000527622 NDUFB1O75438 58 aa9.12□□□□□ -0.95
CTTN-211ENST00000527622 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
CTTN-211ENST00000527622 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
CTTN-211ENST00000527622 M0R143 59 aa9.09□□□□□ -0.95
CTTN-211ENST00000527622 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
CTTN-211ENST00000527622 C14orf132Q9NPU4 83 aa9.08□□□□□ -0.96
CTTN-211ENST00000527622 PDE6GP18545 87 aa9.06□□□□□ -0.96
CTTN-211ENST00000527622 Q6ZVQ6 151 aa9.06□□□□□ -0.96
CTTN-211ENST00000527622 PRR15Q8IV56 129 aa9.05□□□□□ -0.96
CTTN-211ENST00000527622 MMP24-AS1A0A0U1RRL7 71 aa9.03□□□□□ -0.96
CTTN-211ENST00000527622 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.97
CTTN-211ENST00000527622 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
CTTN-211ENST00000527622 SYNE2Q8WXH0 6885 aaKnown RBP8.99□□□□□ -0.97
CTTN-211ENST00000527622 LYRM7Q5U5X0 104 aa8.98□□□□□ -0.97
CTTN-211ENST00000527622 NREPQ16612 68 aa8.97□□□□□ -0.97
CTTN-211ENST00000527622 MRPL34Q9BQ48 92 aaKnown RBP8.97□□□□□ -0.97
CTTN-211ENST00000527622 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.98
CTTN-211ENST00000527622 K7EQZ3 153 aa8.95□□□□□ -0.98
CTTN-211ENST00000527622 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
CTTN-211ENST00000527622 hDV103S1A0JD37 113 aa8.91□□□□□ -0.98
CTTN-211ENST00000527622 H3BT86 120 aa8.88□□□□□ -0.99
CTTN-211ENST00000527622 H1FX-AS1Q4G0G2 97 aa8.88□□□□□ -0.99
CTTN-211ENST00000527622 BATFQ16520 125 aa8.86□□□□□ -0.99
CTTN-211ENST00000527622 Q5W150 140 aa8.86□□□□□ -0.99
CTTN-211ENST00000527622 C9orf118A6NHY6 69 aa8.84□□□□□ -0.99
CTTN-211ENST00000527622 TAX1BP3O14907 124 aa8.83□□□□□ -1
CTTN-211ENST00000527622 NDUFS5O43920 106 aa8.83□□□□□ -1
CTTN-211ENST00000527622 TSTD3H0UI37 97 aa8.82□□□□□ -1
CTTN-211ENST00000527622 A0A1W2PPM0 123 aa8.81□□□□□ -1
CTTN-211ENST00000527622 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
CTTN-211ENST00000527622 BPY2O14599 106 aa8.8□□□□□ -1
CTTN-211ENST00000527622 IGKV2-30P06310 120 aa8.8□□□□□ -1
CTTN-211ENST00000527622 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
CTTN-211ENST00000527622 Q8N9L7 120 aa8.79□□□□□ -1
CTTN-211ENST00000527622 LINC00846Q9NV44 126 aa8.78□□□□□ -1
CTTN-211ENST00000527622 CASC2Q6XLA1 102 aa8.73□□□□□ -1.01
CTTN-211ENST00000527622 HCG22E2RYF7 251 aa8.72□□□□□ -1.01
CTTN-211ENST00000527622 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
CTTN-211ENST00000527622 C4orf26Q17RF5 130 aa8.69□□□□□ -1.02
CTTN-211ENST00000527622 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
CTTN-211ENST00000527622 CXCL6P80162 114 aa8.65□□□□□ -1.02
CTTN-211ENST00000527622 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
CTTN-211ENST00000527622 SPCS1Q9Y6A9 102 aa8.65□□□□□ -1.02
CTTN-211ENST00000527622 PRO0461Q9UI25 63 aa8.63□□□□□ -1.03
CTTN-211ENST00000527622 KRTAP6-3Q3LI67 103 aa8.61□□□□□ -1.03
CTTN-211ENST00000527622 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
CTTN-211ENST00000527622 MT1BP07438 61 aa8.55□□□□□ -1.04
CTTN-211ENST00000527622 UBL5Q9BZL1 73 aa8.54□□□□□ -1.04
CTTN-211ENST00000527622 S4R3F8 94 aa8.52□□□□□ -1.05
CTTN-211ENST00000527622 K7EP34 96 aa8.5□□□□□ -1.05
CTTN-211ENST00000527622 LCA10Q71F78 164 aa8.5□□□□□ -1.05
CTTN-211ENST00000527622 KRTAP19-8Q3LI54 63 aa8.49□□□□□ -1.05
CTTN-211ENST00000527622 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
CTTN-211ENST00000527622 SPRR2GQ9BYE4 73 aa8.49□□□□□ -1.05
CTTN-211ENST00000527622 NEBP20929 6669 aa8.49□□□□□ -1.05
CTTN-211ENST00000527622 FAM236AA0A1B0GUQ0 79 aa8.47□□□□□ -1.05
CTTN-211ENST00000527622 FAM236BA0A1B0GV22 79 aa8.47□□□□□ -1.05
CTTN-211ENST00000527622 MUC12Q9UKN1 5478 aa8.46□□□□□ -1.06
CTTN-211ENST00000527622 COL5A1-AS1Q5SY13 56 aa8.46□□□□□ -1.06
CTTN-211ENST00000527622 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
CTTN-211ENST00000527622 KRTAP3-3Q9BYR6 98 aa8.42□□□□□ -1.06
CTTN-211ENST00000527622 TP53AIP1Q9HCN2 124 aa8.42□□□□□ -1.06
CTTN-211ENST00000527622 A6NN06 94 aa8.41□□□□□ -1.06
CTTN-211ENST00000527622 Q5VV11 94 aa8.41□□□□□ -1.06
CTTN-211ENST00000527622 KLKP1Q107X0 134 aa8.36□□□□□ -1.07
CTTN-211ENST00000527622 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
CTTN-211ENST00000527622 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
CTTN-211ENST00000527622 A0A087WVE0 104 aa8.33□□□□□ -1.08
CTTN-211ENST00000527622 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
CTTN-211ENST00000527622 F8W1H4 67 aa8.28□□□□□ -1.08
CTTN-211ENST00000527622 GTF2H5Q6ZYL4 71 aa8.28□□□□□ -1.08
CTTN-211ENST00000527622 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
CTTN-211ENST00000527622 KMT2DO14686 5537 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms