RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ESRGQ1W209 222 aa2.57□□□□□ -2
SKP1-213ENST00000524288 KCNQ1DNQ9H478 68 aa2.57□□□□□ -2
SKP1-213ENST00000524288 PSORS1C2Q9UIG4 136 aa2.57□□□□□ -2
SKP1-213ENST00000524288 SPART-AS1P0CW21 52 aa2.56□□□□□ -2
SKP1-213ENST00000524288 SPRR1AP35321 89 aa2.56□□□□□ -2
SKP1-213ENST00000524288 SPRR4Q96PI1 79 aa2.56□□□□□ -2
SKP1-213ENST00000524288 CYP4F30PQ9H0H9 118 aa2.56□□□□□ -2
SKP1-213ENST00000524288 ABCA12Q86UK0 2595 aa2.56□□□□□ -2
SKP1-213ENST00000524288 ITPR2Q14571 2701 aa2.55□□□□□ -2
SKP1-213ENST00000524288 hDV103S1A0JD37 113 aa2.55□□□□□ -2
SKP1-213ENST00000524288 A8MUN3 132 aa2.55□□□□□ -2
SKP1-213ENST00000524288 F8P00451 2351 aa2.55□□□□□ -2
SKP1-213ENST00000524288 HIVEP1P15822 2718 aa2.55□□□□□ -2
SKP1-213ENST00000524288 CENPEQ02224 2701 aa2.55□□□□□ -2
SKP1-213ENST00000524288 Q1T7F1 81 aa2.55□□□□□ -2
SKP1-213ENST00000524288 DEFB135Q30KP9 77 aa2.55□□□□□ -2
SKP1-213ENST00000524288 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
SKP1-213ENST00000524288 CCDC168Q8NDH2 2452 aa2.55□□□□□ -2
SKP1-213ENST00000524288 XAGE1AQ9HD64 81 aa2.55□□□□□ -2
SKP1-213ENST00000524288 LINC00474Q9P2X8 69 aa2.55□□□□□ -2
SKP1-213ENST00000524288 NF1P21359 2839 aa2.55□□□□□ -2
SKP1-213ENST00000524288 SONP18583 2426 aaKnown RBP2.54□□□□□ -2
SKP1-213ENST00000524288 ZNF469Q96JG9 3925 aaPredicted RBP2.54□□□□□ -2
SKP1-213ENST00000524288 CSMD2Q7Z408 3487 aa2.54□□□□□ -2
SKP1-213ENST00000524288 KRTAP12-3P60328 96 aa2.54□□□□□ -2
SKP1-213ENST00000524288 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
SKP1-213ENST00000524288 Q6ZRX8 168 aa2.54□□□□□ -2
SKP1-213ENST00000524288 ACANP16112 2415 aa2.54□□□□□ -2
SKP1-213ENST00000524288 NIPBLQ6KC79 2804 aaeCLIP2.53□□□□□ -2
SKP1-213ENST00000524288 A0A0G2JQZ4 141 aa2.53□□□□□ -2
SKP1-213ENST00000524288 ETDCA0A1B0GVM5 59 aa2.53□□□□□ -2
SKP1-213ENST00000524288 K7EIL1 84 aa2.53□□□□□ -2
SKP1-213ENST00000524288 PMAIP1Q13794 54 aa2.53□□□□□ -2
SKP1-213ENST00000524288 PRR15Q8IV56 129 aa2.53□□□□□ -2
SKP1-213ENST00000524288 PKIGQ9Y2B9 76 aa2.53□□□□□ -2
SKP1-213ENST00000524288 C1orf137Q5JT78 98 aa2.52□□□□□ -2.01
SKP1-213ENST00000524288 WFDC10BQ8IUB3 73 aa2.52□□□□□ -2.01
SKP1-213ENST00000524288 Q9BRP9 147 aa2.52□□□□□ -2.01
SKP1-213ENST00000524288 FLNBO75369 2602 aaKnown RBP2.52□□□□□ -2.01
SKP1-213ENST00000524288 DEFB4AO15263 64 aa2.51□□□□□ -2.01
SKP1-213ENST00000524288 NDUFB1O75438 58 aa2.51□□□□□ -2.01
SKP1-213ENST00000524288 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
SKP1-213ENST00000524288 HCG22E2RYF7 251 aa2.5□□□□□ -2.01
SKP1-213ENST00000524288 BRK1Q8WUW1 75 aa2.5□□□□□ -2.01
SKP1-213ENST00000524288 SETD2Q9BYW2 2564 aaPredicted RBP2.5□□□□□ -2.01
SKP1-213ENST00000524288 MTORP42345 2549 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 VWFP04275 2813 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 DNAH1Q9P2D7 4330 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 K7EQZ3 153 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 HTN3P15516 51 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 SPRR1BP22528 89 aa2.49□□□□□ -2.01
SKP1-213ENST00000524288 FBN1P35555 2871 aaKnown RBP2.48□□□□□ -2.01
SKP1-213ENST00000524288 NBEAL2Q6ZNJ1 2754 aa2.48□□□□□ -2.01
SKP1-213ENST00000524288 NSD1Q96L73 2696 aaPredicted RBP2.48□□□□□ -2.01
SKP1-213ENST00000524288 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
SKP1-213ENST00000524288 C9orf163Q8N9P6 203 aa2.47□□□□□ -2.01
SKP1-213ENST00000524288 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
SKP1-213ENST00000524288 ASB16-AS1Q495Z4 193 aa2.46□□□□□ -2.02
SKP1-213ENST00000524288 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
SKP1-213ENST00000524288 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
SKP1-213ENST00000524288 CUBNO60494 3623 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 LOC101927531A0A1B0GV80 90 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 CNBPP62633 177 aaKnown RBP2.45□□□□□ -2.02
SKP1-213ENST00000524288 UBE2BP63146 152 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 Q5VV11 94 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 LIMD2Q9BT23 127 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 TENM1Q9UKZ4 2725 aa2.45□□□□□ -2.02
SKP1-213ENST00000524288 CMYA5Q8N3K9 4069 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 TEP1Q99973 2627 aaKnown RBP2.44□□□□□ -2.02
SKP1-213ENST00000524288 TENM3Q9P273 2699 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 DEFB131BA0A096LNP1 70 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 MMP24-AS1A0A0U1RRL7 71 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 H0Y9P7 68 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 LINC00208Q96KT6 92 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 PLAC8Q9NZF1 115 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 ANK2Q01484 3957 aa2.44□□□□□ -2.02
SKP1-213ENST00000524288 A0A087WSZ3 146 aa2.43□□□□□ -2.02
SKP1-213ENST00000524288 CASC2Q6XLA1 102 aa2.43□□□□□ -2.02
SKP1-213ENST00000524288 A0A096LNI7 61 aa2.42□□□□□ -2.02
SKP1-213ENST00000524288 NUPR2A6NF83 97 aa2.42□□□□□ -2.02
SKP1-213ENST00000524288 RPL37AP61513 92 aaKnown RBP2.42□□□□□ -2.02
SKP1-213ENST00000524288 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
SKP1-213ENST00000524288 TP53AIP1Q9HCN2 124 aa2.42□□□□□ -2.02
SKP1-213ENST00000524288 DYNC2H1Q8NCM8 4307 aaKnown RBP2.41□□□□□ -2.02
SKP1-213ENST00000524288 COA5Q86WW8 74 aa2.41□□□□□ -2.02
SKP1-213ENST00000524288 Q96NJ1 140 aa2.41□□□□□ -2.02
SKP1-213ENST00000524288 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
SKP1-213ENST00000524288 PKD1L1Q8TDX9 2849 aa2.41□□□□□ -2.02
SKP1-213ENST00000524288 A6NN06 94 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 ATP11AUNQ6ZP68 121 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 CDC42SE1Q9NRR8 79 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 APLNQ9ULZ1 77 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 ATRQ13535 2644 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 TENM2Q9NT68 2774 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 ALMS1Q8TCU4 4167 aa2.4□□□□□ -2.03
SKP1-213ENST00000524288 TRRAPQ9Y4A5 3859 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms