RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 NAA38Q9BRA0 125 aaKnown RBP6.2□□□□□ -1.42
VEGFA-223ENST00000523125 J3KT08 172 aa6.17□□□□□ -1.42
VEGFA-223ENST00000523125 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
VEGFA-223ENST00000523125 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
VEGFA-223ENST00000523125 M0R143 59 aa6.16□□□□□ -1.42
VEGFA-223ENST00000523125 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
VEGFA-223ENST00000523125 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
VEGFA-223ENST00000523125 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
VEGFA-223ENST00000523125 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
VEGFA-223ENST00000523125 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
VEGFA-223ENST00000523125 MT2AP02795 61 aa6.14□□□□□ -1.43
VEGFA-223ENST00000523125 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
VEGFA-223ENST00000523125 Q8N9P0 234 aaPredicted RBP6.13□□□□□ -1.43
VEGFA-223ENST00000523125 A0A1B0GW54 56 aa6.12□□□□□ -1.43
VEGFA-223ENST00000523125 A8MWP4 228 aa6.11□□□□□ -1.43
VEGFA-223ENST00000523125 SMIM6P0DI80 62 aa6.11□□□□□ -1.43
VEGFA-223ENST00000523125 C14orf132Q9NPU4 83 aa6.11□□□□□ -1.43
VEGFA-223ENST00000523125 USH2AO75445 5202 aa6.1□□□□□ -1.43
VEGFA-223ENST00000523125 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
VEGFA-223ENST00000523125 NDUFB1O75438 58 aa6.1□□□□□ -1.43
VEGFA-223ENST00000523125 SPINK7P58062 85 aa6.1□□□□□ -1.43
VEGFA-223ENST00000523125 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
VEGFA-223ENST00000523125 MT1FP04733 61 aa6.09□□□□□ -1.43
VEGFA-223ENST00000523125 PDE6GP18545 87 aa6.09□□□□□ -1.43
VEGFA-223ENST00000523125 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
VEGFA-223ENST00000523125 LYRM7Q5U5X0 104 aa6.05□□□□□ -1.44
VEGFA-223ENST00000523125 Q6ZVQ6 151 aa6.05□□□□□ -1.44
VEGFA-223ENST00000523125 PRR15Q8IV56 129 aa6.05□□□□□ -1.44
VEGFA-223ENST00000523125 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
VEGFA-223ENST00000523125 LCE2BO14633 110 aa6.04□□□□□ -1.44
VEGFA-223ENST00000523125 BATFQ16520 125 aa6.04□□□□□ -1.44
VEGFA-223ENST00000523125 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
VEGFA-223ENST00000523125 LOC105371267A0A1B0GV96 52 aa6.03□□□□□ -1.44
VEGFA-223ENST00000523125 TSTD3H0UI37 97 aa6.03□□□□□ -1.44
VEGFA-223ENST00000523125 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
VEGFA-223ENST00000523125 NREPQ16612 68 aa6.03□□□□□ -1.44
VEGFA-223ENST00000523125 MMP24-AS1A0A0U1RRL7 71 aa6.01□□□□□ -1.45
VEGFA-223ENST00000523125 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
VEGFA-223ENST00000523125 TAX1BP3O14907 124 aa6□□□□□ -1.45
VEGFA-223ENST00000523125 WFDC13Q8IUB5 93 aa6□□□□□ -1.45
VEGFA-223ENST00000523125 H3BT86 120 aa5.99□□□□□ -1.45
VEGFA-223ENST00000523125 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
VEGFA-223ENST00000523125 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
VEGFA-223ENST00000523125 A0A1W2PPM0 123 aa5.98□□□□□ -1.45
VEGFA-223ENST00000523125 K7EQZ3 153 aa5.98□□□□□ -1.45
VEGFA-223ENST00000523125 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
VEGFA-223ENST00000523125 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
VEGFA-223ENST00000523125 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
VEGFA-223ENST00000523125 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
VEGFA-223ENST00000523125 Q5W150 140 aa5.92□□□□□ -1.46
VEGFA-223ENST00000523125 BPY2O14599 106 aa5.91□□□□□ -1.46
VEGFA-223ENST00000523125 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
VEGFA-223ENST00000523125 NDUFS5O43920 106 aa5.9□□□□□ -1.46
VEGFA-223ENST00000523125 SMCPP49901 116 aaPredicted RBP5.9□□□□□ -1.46
VEGFA-223ENST00000523125 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
VEGFA-223ENST00000523125 Q8N9L7 120 aa5.89□□□□□ -1.47
VEGFA-223ENST00000523125 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
VEGFA-223ENST00000523125 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
VEGFA-223ENST00000523125 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
VEGFA-223ENST00000523125 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
VEGFA-223ENST00000523125 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
VEGFA-223ENST00000523125 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
VEGFA-223ENST00000523125 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
VEGFA-223ENST00000523125 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
VEGFA-223ENST00000523125 LINC00846Q9NV44 126 aa5.82□□□□□ -1.48
VEGFA-223ENST00000523125 CXCL6P80162 114 aa5.79□□□□□ -1.48
VEGFA-223ENST00000523125 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
VEGFA-223ENST00000523125 COL5A1-AS1Q5SY13 56 aa5.79□□□□□ -1.48
VEGFA-223ENST00000523125 K7EP34 96 aa5.77□□□□□ -1.49
VEGFA-223ENST00000523125 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
VEGFA-223ENST00000523125 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
VEGFA-223ENST00000523125 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
VEGFA-223ENST00000523125 PCP4L1A6NKN8 68 aa5.69□□□□□ -1.5
VEGFA-223ENST00000523125 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
VEGFA-223ENST00000523125 F8W1H4 67 aa5.66□□□□□ -1.5
VEGFA-223ENST00000523125 ETDBQ3ZM63 59 aa5.66□□□□□ -1.5
VEGFA-223ENST00000523125 GTF2H5Q6ZYL4 71 aa5.66□□□□□ -1.5
VEGFA-223ENST00000523125 C1orf64Q8NEQ6 169 aa5.66□□□□□ -1.5
VEGFA-223ENST00000523125 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
VEGFA-223ENST00000523125 S4R3F8 94 aa5.65□□□□□ -1.5
VEGFA-223ENST00000523125 LCA10Q71F78 164 aa5.64□□□□□ -1.51
VEGFA-223ENST00000523125 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
VEGFA-223ENST00000523125 SYNE2Q8WXH0 6885 aaKnown RBP5.63□□□□□ -1.51
VEGFA-223ENST00000523125 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
VEGFA-223ENST00000523125 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
VEGFA-223ENST00000523125 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
VEGFA-223ENST00000523125 MT1BP07438 61 aa5.59□□□□□ -1.51
VEGFA-223ENST00000523125 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
VEGFA-223ENST00000523125 CYP4F30PQ9H0H9 118 aa5.59□□□□□ -1.51
VEGFA-223ENST00000523125 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
VEGFA-223ENST00000523125 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
VEGFA-223ENST00000523125 A0A087WVE0 104 aa5.55□□□□□ -1.52
VEGFA-223ENST00000523125 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
VEGFA-223ENST00000523125 TRAV22A0A0B4J277 110 aa5.53□□□□□ -1.52
VEGFA-223ENST00000523125 ACYP1P07311 99 aa5.52□□□□□ -1.53
VEGFA-223ENST00000523125 KLKP1Q107X0 134 aa5.52□□□□□ -1.53
VEGFA-223ENST00000523125 Q5VV11 94 aa5.52□□□□□ -1.53
VEGFA-223ENST00000523125 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
VEGFA-223ENST00000523125 FAM240AA0A1B0GVK7 77 aa5.49□□□□□ -1.53
VEGFA-223ENST00000523125 A6NN06 94 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms