RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 J3KT08 172 aa13.03□□□□□ -0.32
LAPTM4B-203ENST00000521545 KRTAP9-8Q9BYQ0 159 aa13.03□□□□□ -0.32
LAPTM4B-203ENST00000521545 HRES1P13985 223 aa13.01□□□□□ -0.33
LAPTM4B-203ENST00000521545 MPLKIPQ8TAP9 179 aa12.99□□□□□ -0.33
LAPTM4B-203ENST00000521545 Q6ZQT0 140 aa12.97□□□□□ -0.33
LAPTM4B-203ENST00000521545 NDUFB1O75438 58 aa12.95□□□□□ -0.34
LAPTM4B-203ENST00000521545 ATXN8Q156A1 80 aa12.95□□□□□ -0.34
LAPTM4B-203ENST00000521545 M0R143 59 aa12.94□□□□□ -0.34
LAPTM4B-203ENST00000521545 JMJD7-PLA2G4BH0Y9G9 81 aa12.93□□□□□ -0.34
LAPTM4B-203ENST00000521545 ZCCHC13Q8WW36 166 aaKnown RBP12.92□□□□□ -0.34
LAPTM4B-203ENST00000521545 MTURNQ8N3F0 131 aa12.9□□□□□ -0.34
LAPTM4B-203ENST00000521545 NAA38Q9BRA0 125 aaKnown RBP12.89□□□□□ -0.35
LAPTM4B-203ENST00000521545 A0A1B0GW54 56 aa12.88□□□□□ -0.35
LAPTM4B-203ENST00000521545 PDE6GP18545 87 aa12.86□□□□□ -0.35
LAPTM4B-203ENST00000521545 LOC110117498A0A087WWA1 95 aa12.85□□□□□ -0.35
LAPTM4B-203ENST00000521545 MT2AP02795 61 aa12.84□□□□□ -0.35
LAPTM4B-203ENST00000521545 SPINK7P58062 85 aa12.83□□□□□ -0.36
LAPTM4B-203ENST00000521545 Q8N9P0 234 aaPredicted RBP12.83□□□□□ -0.36
LAPTM4B-203ENST00000521545 A8MWP4 228 aa12.82□□□□□ -0.36
LAPTM4B-203ENST00000521545 LYRM7Q5U5X0 104 aa12.81□□□□□ -0.36
LAPTM4B-203ENST00000521545 C8orf17Q9NRJ1 99 aa12.81□□□□□ -0.36
LAPTM4B-203ENST00000521545 C14orf132Q9NPU4 83 aa12.78□□□□□ -0.36
LAPTM4B-203ENST00000521545 IGKV3D-7A0A0C4DH55 119 aa12.76□□□□□ -0.37
LAPTM4B-203ENST00000521545 KRTAP10-10P60014 251 aa12.75□□□□□ -0.37
LAPTM4B-203ENST00000521545 MT1FP04733 61 aa12.73□□□□□ -0.37
LAPTM4B-203ENST00000521545 NREPQ16612 68 aa12.73□□□□□ -0.37
LAPTM4B-203ENST00000521545 SMIM6P0DI80 62 aa12.71□□□□□ -0.37
LAPTM4B-203ENST00000521545 Q6ZVQ6 151 aa12.71□□□□□ -0.37
LAPTM4B-203ENST00000521545 PRR15Q8IV56 129 aa12.69□□□□□ -0.38
LAPTM4B-203ENST00000521545 USH2AO75445 5202 aa12.68□□□□□ -0.38
LAPTM4B-203ENST00000521545 WFDC13Q8IUB5 93 aa12.66□□□□□ -0.38
LAPTM4B-203ENST00000521545 BATFQ16520 125 aa12.65□□□□□ -0.38
LAPTM4B-203ENST00000521545 KRTAP9-3Q9BYQ3 159 aa12.64□□□□□ -0.39
LAPTM4B-203ENST00000521545 TSTD3H0UI37 97 aa12.63□□□□□ -0.39
LAPTM4B-203ENST00000521545 LCE2BO14633 110 aa12.6□□□□□ -0.39
LAPTM4B-203ENST00000521545 TMEM254Q8TBM7 123 aa12.6□□□□□ -0.39
LAPTM4B-203ENST00000521545 MRPL34Q9BQ48 92 aaKnown RBP12.6□□□□□ -0.39
LAPTM4B-203ENST00000521545 SSPOA2VEC9 5147 aa12.59□□□□□ -0.39
LAPTM4B-203ENST00000521545 MMP24-AS1A0A0U1RRL7 71 aa12.57□□□□□ -0.4
LAPTM4B-203ENST00000521545 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.56□□□□□ -0.4
LAPTM4B-203ENST00000521545 H3BT86 120 aa12.55□□□□□ -0.4
LAPTM4B-203ENST00000521545 hDV103S1A0JD37 113 aa12.54□□□□□ -0.4
LAPTM4B-203ENST00000521545 C9orf118A6NHY6 69 aa12.53□□□□□ -0.4
LAPTM4B-203ENST00000521545 NDUFS5O43920 106 aa12.53□□□□□ -0.4
LAPTM4B-203ENST00000521545 K7EQZ3 153 aa12.51□□□□□ -0.41
LAPTM4B-203ENST00000521545 KRTAP9-7A8MTY7 169 aa12.48□□□□□ -0.41
LAPTM4B-203ENST00000521545 A0A1W2PPM0 123 aa12.47□□□□□ -0.41
LAPTM4B-203ENST00000521545 KRTAP19-1Q8IUB9 90 aa12.47□□□□□ -0.41
LAPTM4B-203ENST00000521545 BPY2O14599 106 aa12.46□□□□□ -0.41
LAPTM4B-203ENST00000521545 TAX1BP3O14907 124 aa12.44□□□□□ -0.42
LAPTM4B-203ENST00000521545 H1FX-AS1Q4G0G2 97 aa12.41□□□□□ -0.42
LAPTM4B-203ENST00000521545 IGKV2D-30A0A075B6S6 120 aa12.37□□□□□ -0.43
LAPTM4B-203ENST00000521545 IGKV2-30P06310 120 aa12.37□□□□□ -0.43
LAPTM4B-203ENST00000521545 FCGBPQ9Y6R7 5405 aaPredicted RBP12.36□□□□□ -0.43
LAPTM4B-203ENST00000521545 C7orf65Q6ZTY9 151 aa12.34□□□□□ -0.43
LAPTM4B-203ENST00000521545 LINC00846Q9NV44 126 aa12.34□□□□□ -0.43
LAPTM4B-203ENST00000521545 Q5W150 140 aa12.32□□□□□ -0.44
LAPTM4B-203ENST00000521545 CASC2Q6XLA1 102 aa12.32□□□□□ -0.44
LAPTM4B-203ENST00000521545 Q8N9L7 120 aa12.3□□□□□ -0.44
LAPTM4B-203ENST00000521545 SPCS1Q9Y6A9 102 aa12.3□□□□□ -0.44
LAPTM4B-203ENST00000521545 LOC105371267A0A1B0GV96 52 aa12.27□□□□□ -0.45
LAPTM4B-203ENST00000521545 HCG22E2RYF7 251 aa12.27□□□□□ -0.45
LAPTM4B-203ENST00000521545 KRTAP19-6Q3LI70 58 aa12.21□□□□□ -0.45
LAPTM4B-203ENST00000521545 CXCL6P80162 114 aa12.2□□□□□ -0.46
LAPTM4B-203ENST00000521545 SMCPP49901 116 aaPredicted RBP12.19□□□□□ -0.46
LAPTM4B-203ENST00000521545 UBL5Q9BZL1 73 aa12.18□□□□□ -0.46
LAPTM4B-203ENST00000521545 C4orf26Q17RF5 130 aa12.16□□□□□ -0.46
LAPTM4B-203ENST00000521545 COL5A1-AS1Q5SY13 56 aa12.11□□□□□ -0.47
LAPTM4B-203ENST00000521545 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
LAPTM4B-203ENST00000521545 K7EP34 96 aa12.03□□□□□ -0.48
LAPTM4B-203ENST00000521545 MACF1Q9UPN3 7388 aaKnown RBP11.99□□□□□ -0.49
LAPTM4B-203ENST00000521545 C5orf47Q569G3 176 aa11.99□□□□□ -0.49
LAPTM4B-203ENST00000521545 TP53AIP1Q9HCN2 124 aa11.94□□□□□ -0.5
LAPTM4B-203ENST00000521545 S4R3F8 94 aa11.94□□□□□ -0.5
LAPTM4B-203ENST00000521545 FAM236AA0A1B0GUQ0 79 aa11.93□□□□□ -0.5
LAPTM4B-203ENST00000521545 FAM236BA0A1B0GV22 79 aa11.93□□□□□ -0.5
LAPTM4B-203ENST00000521545 C1orf64Q8NEQ6 169 aa11.93□□□□□ -0.5
LAPTM4B-203ENST00000521545 KRTAP3-1Q9BYR8 98 aa11.92□□□□□ -0.5
LAPTM4B-203ENST00000521545 GTF2H5Q6ZYL4 71 aa11.9□□□□□ -0.5
LAPTM4B-203ENST00000521545 CSAG1Q6PB30 78 aa11.89□□□□□ -0.51
LAPTM4B-203ENST00000521545 F8W1H4 67 aa11.84□□□□□ -0.51
LAPTM4B-203ENST00000521545 SYNE2Q8WXH0 6885 aaKnown RBP11.82□□□□□ -0.52
LAPTM4B-203ENST00000521545 LCA10Q71F78 164 aa11.82□□□□□ -0.52
LAPTM4B-203ENST00000521545 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
LAPTM4B-203ENST00000521545 KRTAP6-3Q3LI67 103 aa11.72□□□□□ -0.53
LAPTM4B-203ENST00000521545 Q5VV11 94 aa11.7□□□□□ -0.54
LAPTM4B-203ENST00000521545 CYP4F30PQ9H0H9 118 aa11.7□□□□□ -0.54
LAPTM4B-203ENST00000521545 SPRR2GQ9BYE4 73 aa11.67□□□□□ -0.54
LAPTM4B-203ENST00000521545 PCP4L1A6NKN8 68 aa11.64□□□□□ -0.55
LAPTM4B-203ENST00000521545 A6NN06 94 aa11.64□□□□□ -0.55
LAPTM4B-203ENST00000521545 MT1BP07438 61 aa11.64□□□□□ -0.55
LAPTM4B-203ENST00000521545 TRAV22A0A0B4J277 110 aa11.63□□□□□ -0.55
LAPTM4B-203ENST00000521545 KLKP1Q107X0 134 aa11.62□□□□□ -0.55
LAPTM4B-203ENST00000521545 KRTAP19-8Q3LI54 63 aa11.62□□□□□ -0.55
LAPTM4B-203ENST00000521545 LOC101927531A0A1B0GV80 90 aa11.61□□□□□ -0.55
LAPTM4B-203ENST00000521545 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
LAPTM4B-203ENST00000521545 ACYP1P07311 99 aa11.59□□□□□ -0.55
LAPTM4B-203ENST00000521545 ATP5EP2Q5VTU8 51 aa11.51□□□□□ -0.57
LAPTM4B-203ENST00000521545 A0A087WVE0 104 aa11.5□□□□□ -0.57
LAPTM4B-203ENST00000521545 HIST1H4AP62805 103 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms