RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 PYY3Q5JQD4 70 aa9.71□□□□□ -0.86
PABPC1-215ENST00000520804 VPS25Q9BRG1 176 aa9.7□□□□□ -0.86
PABPC1-215ENST00000520804 LCE2BO14633 110 aa9.69□□□□□ -0.86
PABPC1-215ENST00000520804 KRTAP10-10P60014 251 aa9.68□□□□□ -0.86
PABPC1-215ENST00000520804 RBM3P98179 157 aaKnown RBP9.68□□□□□ -0.86
PABPC1-215ENST00000520804 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
PABPC1-215ENST00000520804 DSCR8Q96T75 97 aa9.67□□□□□ -0.86
PABPC1-215ENST00000520804 ZCCHC13Q8WW36 166 aaKnown RBP9.65□□□□□ -0.86
PABPC1-215ENST00000520804 FCGBPQ9Y6R7 5405 aaPredicted RBP9.64□□□□□ -0.87
PABPC1-215ENST00000520804 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
PABPC1-215ENST00000520804 J3KT08 172 aa9.63□□□□□ -0.87
PABPC1-215ENST00000520804 SCGB1C2P0DMR2 95 aa9.63□□□□□ -0.87
PABPC1-215ENST00000520804 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
PABPC1-215ENST00000520804 KRTAP19-1Q8IUB9 90 aa9.62□□□□□ -0.87
PABPC1-215ENST00000520804 SPINK7P58062 85 aa9.61□□□□□ -0.87
PABPC1-215ENST00000520804 C21orf62-AS1Q17RA5 79 aa9.61□□□□□ -0.87
PABPC1-215ENST00000520804 C9JAW5 83 aa9.6□□□□□ -0.87
PABPC1-215ENST00000520804 Q6ZQT0 140 aa9.59□□□□□ -0.87
PABPC1-215ENST00000520804 BAALC-AS2P0C853 105 aa9.58□□□□□ -0.88
PABPC1-215ENST00000520804 Q8N9P0 234 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-215ENST00000520804 NDUFB1O75438 58 aa9.55□□□□□ -0.88
PABPC1-215ENST00000520804 A8MWP4 228 aa9.5□□□□□ -0.89
PABPC1-215ENST00000520804 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
PABPC1-215ENST00000520804 WFDC13Q8IUB5 93 aa9.48□□□□□ -0.89
PABPC1-215ENST00000520804 MACF1Q9UPN3 7388 aaKnown RBP9.48□□□□□ -0.89
PABPC1-215ENST00000520804 A0A1B0GW54 56 aa9.47□□□□□ -0.89
PABPC1-215ENST00000520804 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
PABPC1-215ENST00000520804 LYRM7Q5U5X0 104 aa9.47□□□□□ -0.89
PABPC1-215ENST00000520804 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.9
PABPC1-215ENST00000520804 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
PABPC1-215ENST00000520804 ATXN8Q156A1 80 aa9.44□□□□□ -0.9
PABPC1-215ENST00000520804 PDE6GP18545 87 aa9.42□□□□□ -0.9
PABPC1-215ENST00000520804 Q6ZVQ6 151 aa9.42□□□□□ -0.9
PABPC1-215ENST00000520804 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
PABPC1-215ENST00000520804 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
PABPC1-215ENST00000520804 LINC00846Q9NV44 126 aa9.4□□□□□ -0.9
PABPC1-215ENST00000520804 SYNE2Q8WXH0 6885 aaKnown RBP9.4□□□□□ -0.9
PABPC1-215ENST00000520804 KRTAP19-6Q3LI70 58 aa9.39□□□□□ -0.91
PABPC1-215ENST00000520804 PRR15Q8IV56 129 aa9.39□□□□□ -0.91
PABPC1-215ENST00000520804 M0R143 59 aa9.37□□□□□ -0.91
PABPC1-215ENST00000520804 C14orf132Q9NPU4 83 aa9.37□□□□□ -0.91
PABPC1-215ENST00000520804 NREPQ16612 68 aa9.34□□□□□ -0.91
PABPC1-215ENST00000520804 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
PABPC1-215ENST00000520804 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
PABPC1-215ENST00000520804 TMEM254Q8TBM7 123 aa9.33□□□□□ -0.92
PABPC1-215ENST00000520804 H1FX-AS1Q4G0G2 97 aa9.3□□□□□ -0.92
PABPC1-215ENST00000520804 hDV103S1A0JD37 113 aa9.26□□□□□ -0.93
PABPC1-215ENST00000520804 K7EQZ3 153 aa9.25□□□□□ -0.93
PABPC1-215ENST00000520804 NDUFS5O43920 106 aa9.25□□□□□ -0.93
PABPC1-215ENST00000520804 IGKV2D-30A0A075B6S6 120 aa9.19□□□□□ -0.94
PABPC1-215ENST00000520804 IGKV2-30P06310 120 aa9.19□□□□□ -0.94
PABPC1-215ENST00000520804 Q5W150 140 aa9.17□□□□□ -0.94
PABPC1-215ENST00000520804 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
PABPC1-215ENST00000520804 H3BT86 120 aa9.15□□□□□ -0.94
PABPC1-215ENST00000520804 BPY2O14599 106 aa9.15□□□□□ -0.94
PABPC1-215ENST00000520804 BATFQ16520 125 aa9.12□□□□□ -0.95
PABPC1-215ENST00000520804 SMIM6P0DI80 62 aa9.11□□□□□ -0.95
PABPC1-215ENST00000520804 KRTAP6-3Q3LI67 103 aa9.09□□□□□ -0.95
PABPC1-215ENST00000520804 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
PABPC1-215ENST00000520804 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
PABPC1-215ENST00000520804 CASC2Q6XLA1 102 aa9.07□□□□□ -0.96
PABPC1-215ENST00000520804 Q8N9L7 120 aa9.07□□□□□ -0.96
PABPC1-215ENST00000520804 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
PABPC1-215ENST00000520804 TSTD3H0UI37 97 aa9.05□□□□□ -0.96
PABPC1-215ENST00000520804 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
PABPC1-215ENST00000520804 TAX1BP3O14907 124 aa9.02□□□□□ -0.97
PABPC1-215ENST00000520804 CXCL6P80162 114 aa9.01□□□□□ -0.97
PABPC1-215ENST00000520804 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
PABPC1-215ENST00000520804 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
PABPC1-215ENST00000520804 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
PABPC1-215ENST00000520804 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
PABPC1-215ENST00000520804 SMCPP49901 116 aaPredicted RBP8.89□□□□□ -0.99
PABPC1-215ENST00000520804 SPCS1Q9Y6A9 102 aa8.89□□□□□ -0.99
PABPC1-215ENST00000520804 S4R3F8 94 aa8.89□□□□□ -0.99
PABPC1-215ENST00000520804 MT1BP07438 61 aa8.88□□□□□ -0.99
PABPC1-215ENST00000520804 A6NN06 94 aa8.87□□□□□ -0.99
PABPC1-215ENST00000520804 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
PABPC1-215ENST00000520804 UBL5Q9BZL1 73 aa8.87□□□□□ -0.99
PABPC1-215ENST00000520804 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
PABPC1-215ENST00000520804 Q5VV11 94 aa8.85□□□□□ -0.99
PABPC1-215ENST00000520804 LCA10Q71F78 164 aa8.84□□□□□ -0.99
PABPC1-215ENST00000520804 SPRR2GQ9BYE4 73 aa8.84□□□□□ -0.99
PABPC1-215ENST00000520804 NEBP20929 6669 aa8.84□□□□□ -0.99
PABPC1-215ENST00000520804 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
PABPC1-215ENST00000520804 PRO0461Q9UI25 63 aa8.78□□□□□ -1
PABPC1-215ENST00000520804 TP53AIP1Q9HCN2 124 aa8.77□□□□□ -1.01
PABPC1-215ENST00000520804 LOC105371267A0A1B0GV96 52 aa8.75□□□□□ -1.01
PABPC1-215ENST00000520804 MUC12Q9UKN1 5478 aa8.75□□□□□ -1.01
PABPC1-215ENST00000520804 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
PABPC1-215ENST00000520804 KRTAP10-5P60370 271 aa8.73□□□□□ -1.01
PABPC1-215ENST00000520804 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
PABPC1-215ENST00000520804 K7EP34 96 aa8.69□□□□□ -1.02
PABPC1-215ENST00000520804 COL5A1-AS1Q5SY13 56 aa8.67□□□□□ -1.02
PABPC1-215ENST00000520804 CYP4F30PQ9H0H9 118 aa8.64□□□□□ -1.03
PABPC1-215ENST00000520804 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
PABPC1-215ENST00000520804 A0A087WVE0 104 aa8.59□□□□□ -1.03
PABPC1-215ENST00000520804 KRTAP5-9P26371 169 aa8.57□□□□□ -1.04
PABPC1-215ENST00000520804 TRAV22A0A0B4J277 110 aa8.54□□□□□ -1.04
PABPC1-215ENST00000520804 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
PABPC1-215ENST00000520804 F8W1H4 67 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms