RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 GABARAPH6UMI1 98 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 CORTO00230 105 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 SCGB1A1P11684 91 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 SLC25A4P12235 298 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 ADCYAP1P18509 176 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 RBP2P50120 134 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 LINC00158P58513 81 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 OR13C6PQ8NH95 151 aa-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 RPL39LQ96EH5 51 aaKnown RBP-1.37□□□□□ -2.63
SCARNA1-201ENST00000517138 GNG14A0A1W2PPG7 69 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 J3KT08 172 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 DBIP07108 87 aaKnown RBP-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 COX7BP24311 80 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 COX7B2Q8TF08 81 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 SMIM7Q9BQ49 75 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 TAS2R8Q9NYW2 309 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 ABRACLQ9P1F3 81 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 SPCS1Q9Y6A9 102 aa-1.38□□□□□ -2.63
SCARNA1-201ENST00000517138 SNCAP37840 140 aa-1.39□□□□□ -2.63
SCARNA1-201ENST00000517138 TMEM128Q5BJH2 165 aa-1.39□□□□□ -2.63
SCARNA1-201ENST00000517138 TRGV9Q99603 122 aa-1.39□□□□□ -2.63
SCARNA1-201ENST00000517138 CDKN2A-AS1Q9UH64 79 aa-1.39□□□□□ -2.63
SCARNA1-201ENST00000517138 HIGD1AQ9Y241 93 aa-1.39□□□□□ -2.63
SCARNA1-201ENST00000517138 hADV29S1A0JD25 119 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 APOC1P02654 83 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 SDC2P34741 201 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 RPL39P62891 51 aaKnown RBP-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 S100A7L2Q5SY68 101 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 TMEM35BQ8NCS4 154 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 C1orf54Q8WWF1 131 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 PYDC1Q8WXC3 89 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 LENEPQ9Y5L5 61 aa-1.4□□□□□ -2.63
SCARNA1-201ENST00000517138 A0A0G2JND7 137 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 MIF4GDA9UHW6 222 aaKnown RBP-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 NDUFB1O75438 58 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 FADDQ13158 208 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 COX17Q14061 63 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 SMIM20Q8N5G0 67 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 TMEM191AQ9H0A3 160 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 HIGD1BQ9P298 99 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 IER3IP1Q9Y5U9 82 aa-1.41□□□□□ -2.64
SCARNA1-201ENST00000517138 TRAV22A0A0B4J277 110 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 A0A1B0GX51 115 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 I3L3M4 83 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 PDCD5O14737 125 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 SPINK8P0C7L1 97 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 SNRPFP62306 86 aaKnown RBP-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 LINC00305Q7Z4B0 112 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 SMIM11BQ8TCY0 68 aa-1.42□□□□□ -2.64
SCARNA1-201ENST00000517138 S100A8P05109 93 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 FABP1P07148 127 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 SMIM13P0DJ93 91 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 HIST1H1DP16402 221 aaKnown RBP-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 OTOSQ8NHW6 89 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 AP3S1Q92572 193 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 BANF2Q9H503 90 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 MED31Q9Y3C7 131 aa-1.43□□□□□ -2.64
SCARNA1-201ENST00000517138 ZNF670-ZNF695F2Z2N8 137 aa-1.44□□□□□ -2.64
SCARNA1-201ENST00000517138 S100A11P31949 105 aa-1.44□□□□□ -2.64
SCARNA1-201ENST00000517138 CCDC58Q4VC31 144 aa-1.44□□□□□ -2.64
SCARNA1-201ENST00000517138 PPP1R1CQ8WVI7 109 aa-1.44□□□□□ -2.64
SCARNA1-201ENST00000517138 VPS25Q9BRG1 176 aa-1.44□□□□□ -2.64
SCARNA1-201ENST00000517138 CALML5Q9NZT1 146 aa-1.44□□□□□ -2.64
SCARNA1-201ENST00000517138 IFNGP01579 166 aa-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 POLR2JP52435 117 aaKnown RBP-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 BVES-AS1Q5T3Y7 98 aa-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 SPANXN1Q5VSR9 72 aa-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 TSC22D3Q99576 134 aa-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 NMES1Q9C002 83 aa-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 SPANXA1Q9NS26 97 aa-1.45□□□□□ -2.64
SCARNA1-201ENST00000517138 H3BMG7 143 aa-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 IL5P05113 134 aa-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 MRPS25P82663 173 aaKnown RBP-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 BAGE3Q86Y29 109 aa-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 SNHG12Q9BXW3 62 aa-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 SCP2D1Q9UJQ7 156 aa-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 R4GMQ9 66 aa-1.46□□□□□ -2.64
SCARNA1-201ENST00000517138 A0A1B0GV72 72 aa-1.47□□□□□ -2.64
SCARNA1-201ENST00000517138 FCER1GP30273 86 aa-1.47□□□□□ -2.64
SCARNA1-201ENST00000517138 CKS2P33552 79 aa-1.47□□□□□ -2.64
SCARNA1-201ENST00000517138 UBE2L3P68036 154 aaKnown RBP-1.47□□□□□ -2.64
SCARNA1-201ENST00000517138 CATR1Q13166 79 aa-1.47□□□□□ -2.64
SCARNA1-201ENST00000517138 SMIM27A0A1W2PRY6 76 aa-1.48□□□□□ -2.65
SCARNA1-201ENST00000517138 C10orf113Q5VZT2 155 aa-1.48□□□□□ -2.65
SCARNA1-201ENST00000517138 RPL7L1Q6DKI1 246 aaKnown RBP-1.48□□□□□ -2.65
SCARNA1-201ENST00000517138 FAM167A-AS1Q96KT0 104 aa-1.48□□□□□ -2.65
SCARNA1-201ENST00000517138 HBDP02042 147 aa-1.49□□□□□ -2.65
SCARNA1-201ENST00000517138 S100A6P06703 90 aa-1.49□□□□□ -2.65
SCARNA1-201ENST00000517138 NBEAP1P0C6P0 100 aa-1.49□□□□□ -2.65
SCARNA1-201ENST00000517138 C2orf88Q9BSF0 95 aa-1.49□□□□□ -2.65
SCARNA1-201ENST00000517138 ST20Q9HBF5 79 aa-1.49□□□□□ -2.65
SCARNA1-201ENST00000517138 LAMTOR2Q9Y2Q5 125 aa-1.49□□□□□ -2.65
SCARNA1-201ENST00000517138 CEBPZOSA8MTT3 80 aa-1.5□□□□□ -2.65
SCARNA1-201ENST00000517138 RPL38P63173 70 aaKnown RBP-1.5□□□□□ -2.65
SCARNA1-201ENST00000517138 WHAMMP3Q1A5X7 153 aa-1.5□□□□□ -2.65
SCARNA1-201ENST00000517138 MEIG1Q5JSS6 88 aa-1.5□□□□□ -2.65
SCARNA1-201ENST00000517138 BAGE2Q86Y30 109 aa-1.5□□□□□ -2.65
SCARNA1-201ENST00000517138 PDCD10Q9BUL8 212 aa-1.5□□□□□ -2.65
SCARNA1-201ENST00000517138 SYS1-DBNDD2H3BUS1 97 aa-1.51□□□□□ -2.65
SCARNA1-201ENST00000517138 IFI27P40305 119 aaPredicted RBP-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms