RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
SNF8-214ENST00000515174 KRTAP29-1A8MX34 341 aaPredicted RBP5.95□□□□□ -1.46
SNF8-214ENST00000515174 PLA2G1BP04054 148 aaKnown RBP5.95□□□□□ -1.46
SNF8-214ENST00000515174 DEFB116Q30KQ4 102 aa5.95□□□□□ -1.46
SNF8-214ENST00000515174 RPS29P62273 56 aaKnown RBP5.93□□□□□ -1.46
SNF8-214ENST00000515174 HRCT1Q6UXD1 115 aa5.93□□□□□ -1.46
SNF8-214ENST00000515174 SPINK1P00995 79 aa5.91□□□□□ -1.46
SNF8-214ENST00000515174 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
SNF8-214ENST00000515174 SPAG11AQ6PDA7 123 aa5.91□□□□□ -1.46
SNF8-214ENST00000515174 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
SNF8-214ENST00000515174 CASC2Q6XLA1 102 aa5.9□□□□□ -1.46
SNF8-214ENST00000515174 TYMSOSQ8TAI1 123 aa5.9□□□□□ -1.46
SNF8-214ENST00000515174 LIMD2Q9BT23 127 aa5.9□□□□□ -1.46
SNF8-214ENST00000515174 MMP24-AS1A0A0U1RRL7 71 aa5.89□□□□□ -1.47
SNF8-214ENST00000515174 C5orf47Q569G3 176 aa5.89□□□□□ -1.47
SNF8-214ENST00000515174 C4orf48Q5BLP8 95 aa5.88□□□□□ -1.47
SNF8-214ENST00000515174 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
SNF8-214ENST00000515174 NDUFC1O43677 76 aa5.87□□□□□ -1.47
SNF8-214ENST00000515174 hDV103S1A0JD37 113 aa5.86□□□□□ -1.47
SNF8-214ENST00000515174 C8orf87E5RJ46 101 aa5.86□□□□□ -1.47
SNF8-214ENST00000515174 C1orf195Q5TG92 126 aa5.86□□□□□ -1.47
SNF8-214ENST00000515174 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
SNF8-214ENST00000515174 C20orf197Q8N268 126 aa5.86□□□□□ -1.47
SNF8-214ENST00000515174 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
SNF8-214ENST00000515174 OXTP01178 125 aa5.85□□□□□ -1.47
SNF8-214ENST00000515174 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
SNF8-214ENST00000515174 TP53AIP1Q9HCN2 124 aa5.85□□□□□ -1.47
SNF8-214ENST00000515174 A0A0U1RQV1 116 aa5.84□□□□□ -1.47
SNF8-214ENST00000515174 H3BPC8 53 aa5.84□□□□□ -1.47
SNF8-214ENST00000515174 PRR26Q8N8Z3 221 aa5.84□□□□□ -1.47
SNF8-214ENST00000515174 LINC00304Q8N9R0 145 aa5.84□□□□□ -1.47
SNF8-214ENST00000515174 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
SNF8-214ENST00000515174 TMEM258P61165 79 aa5.83□□□□□ -1.48
SNF8-214ENST00000515174 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
SNF8-214ENST00000515174 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
SNF8-214ENST00000515174 H7BZZ5 65 aa5.81□□□□□ -1.48
SNF8-214ENST00000515174 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
SNF8-214ENST00000515174 CYSTM1Q9H1C7 97 aa5.81□□□□□ -1.48
SNF8-214ENST00000515174 MP68P56378 58 aa5.79□□□□□ -1.48
SNF8-214ENST00000515174 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
SNF8-214ENST00000515174 LINC00313P59037 77 aa5.78□□□□□ -1.48
SNF8-214ENST00000515174 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
SNF8-214ENST00000515174 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
SNF8-214ENST00000515174 TNXBP22105 4242 aa5.77□□□□□ -1.49
SNF8-214ENST00000515174 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
SNF8-214ENST00000515174 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
SNF8-214ENST00000515174 ATP5EP56381 51 aaPredicted RBP5.76□□□□□ -1.49
SNF8-214ENST00000515174 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
SNF8-214ENST00000515174 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
SNF8-214ENST00000515174 H0Y9P7 68 aa5.74□□□□□ -1.49
SNF8-214ENST00000515174 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
SNF8-214ENST00000515174 FAM236DA0A1B0GTK5 79 aa5.71□□□□□ -1.5
SNF8-214ENST00000515174 FAM236CP0DP71 79 aa5.71□□□□□ -1.5
SNF8-214ENST00000515174 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
SNF8-214ENST00000515174 LINC00208Q96KT6 92 aa5.71□□□□□ -1.5
SNF8-214ENST00000515174 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
SNF8-214ENST00000515174 NDUFS5O43920 106 aa5.69□□□□□ -1.5
SNF8-214ENST00000515174 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
SNF8-214ENST00000515174 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
SNF8-214ENST00000515174 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
SNF8-214ENST00000515174 LOC101927531A0A1B0GV80 90 aa5.67□□□□□ -1.5
SNF8-214ENST00000515174 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
SNF8-214ENST00000515174 SERP1Q9Y6X1 66 aa5.66□□□□□ -1.5
SNF8-214ENST00000515174 Q5W150 140 aa5.65□□□□□ -1.5
SNF8-214ENST00000515174 FP248Q71RG6 208 aaPredicted RBP5.65□□□□□ -1.5
SNF8-214ENST00000515174 LRP2P98164 4655 aa5.63□□□□□ -1.51
SNF8-214ENST00000515174 IGLV7-46A0A075B6I9 117 aa5.62□□□□□ -1.51
SNF8-214ENST00000515174 A8MUU9 505 aa5.62□□□□□ -1.51
SNF8-214ENST00000515174 C20orf166-AS1Q96NR2 134 aa5.62□□□□□ -1.51
SNF8-214ENST00000515174 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
SNF8-214ENST00000515174 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
SNF8-214ENST00000515174 Q75L30 129 aa5.56□□□□□ -1.52
SNF8-214ENST00000515174 SMIM26A0A096LP01 95 aa5.53□□□□□ -1.52
SNF8-214ENST00000515174 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
SNF8-214ENST00000515174 C9orf92A6NGG3 77 aa5.51□□□□□ -1.53
SNF8-214ENST00000515174 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
SNF8-214ENST00000515174 HRES1P13985 223 aa5.49□□□□□ -1.53
SNF8-214ENST00000515174 C7orf65Q6ZTY9 151 aa5.49□□□□□ -1.53
SNF8-214ENST00000515174 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
SNF8-214ENST00000515174 PRR4Q16378 134 aa5.47□□□□□ -1.53
SNF8-214ENST00000515174 DMAC1Q96GE9 116 aa5.46□□□□□ -1.54
SNF8-214ENST00000515174 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
SNF8-214ENST00000515174 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
SNF8-214ENST00000515174 ACYP2P14621 99 aa5.45□□□□□ -1.54
SNF8-214ENST00000515174 RPL37P61927 97 aaKnown RBP5.45□□□□□ -1.54
SNF8-214ENST00000515174 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
SNF8-214ENST00000515174 XP32Q5T750 250 aa5.43□□□□□ -1.54
SNF8-214ENST00000515174 COA5Q86WW8 74 aa5.43□□□□□ -1.54
SNF8-214ENST00000515174 A8MUN3 132 aa5.42□□□□□ -1.54
SNF8-214ENST00000515174 ATP11AUNQ6ZP68 121 aa5.42□□□□□ -1.54
SNF8-214ENST00000515174 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
SNF8-214ENST00000515174 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
SNF8-214ENST00000515174 Q1T7F1 81 aa5.41□□□□□ -1.54
SNF8-214ENST00000515174 LPAP08519 4548 aa5.4□□□□□ -1.54
SNF8-214ENST00000515174 SPINK7P58062 85 aa5.4□□□□□ -1.54
SNF8-214ENST00000515174 V9GYY9 64 aa5.4□□□□□ -1.54
SNF8-214ENST00000515174 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
SNF8-214ENST00000515174 MUC2Q02817 5179 aa5.32□□□□□ -1.56
SNF8-214ENST00000515174 C4orf26Q17RF5 130 aa5.32□□□□□ -1.56
SNF8-214ENST00000515174 COX6B2Q6YFQ2 88 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms