RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 IGLV5-52A0A0A0MRZ9 124 aa4.58□□□□□ -1.68
CLIP1-205ENST00000514271 SPRR1BP22528 89 aa4.58□□□□□ -1.68
CLIP1-205ENST00000514271 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
CLIP1-205ENST00000514271 A8MU10 97 aa4.57□□□□□ -1.68
CLIP1-205ENST00000514271 ST20-AS1Q8NBB2 130 aa4.56□□□□□ -1.68
CLIP1-205ENST00000514271 Q96NJ1 140 aa4.56□□□□□ -1.68
CLIP1-205ENST00000514271 SPTSSBQ8NFR3 76 aa4.55□□□□□ -1.68
CLIP1-205ENST00000514271 K7EQZ3 153 aa4.55□□□□□ -1.68
CLIP1-205ENST00000514271 Q8N9P0 234 aaPredicted RBP4.55□□□□□ -1.68
CLIP1-205ENST00000514271 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
CLIP1-205ENST00000514271 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
CLIP1-205ENST00000514271 HAMPP81172 84 aa4.54□□□□□ -1.68
CLIP1-205ENST00000514271 KRTAP13-1Q8IUC0 172 aa4.54□□□□□ -1.68
CLIP1-205ENST00000514271 DNAH5Q8TE73 4624 aa4.54□□□□□ -1.68
CLIP1-205ENST00000514271 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
CLIP1-205ENST00000514271 Q6ZSA8 131 aa4.53□□□□□ -1.68
CLIP1-205ENST00000514271 KRTAP16-1A8MUX0 517 aa4.53□□□□□ -1.68
CLIP1-205ENST00000514271 IGKV3OR2-268A0A0C4DH90 116 aa4.53□□□□□ -1.68
CLIP1-205ENST00000514271 ETDCA0A1B0GVM5 59 aa4.53□□□□□ -1.68
CLIP1-205ENST00000514271 H3BPC8 53 aa4.53□□□□□ -1.68
CLIP1-205ENST00000514271 CAMK2N2Q96S95 79 aa4.53□□□□□ -1.68
CLIP1-205ENST00000514271 A0A087X002 238 aa4.52□□□□□ -1.69
CLIP1-205ENST00000514271 HCG22E2RYF7 251 aa4.52□□□□□ -1.69
CLIP1-205ENST00000514271 DHRS4-AS1Q9P1J3 65 aa4.52□□□□□ -1.69
CLIP1-205ENST00000514271 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
CLIP1-205ENST00000514271 RETNLBQ9BQ08 111 aa4.51□□□□□ -1.69
CLIP1-205ENST00000514271 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
CLIP1-205ENST00000514271 XAGE1AQ9HD64 81 aa4.51□□□□□ -1.69
CLIP1-205ENST00000514271 FAT2Q9NYQ8 4349 aa4.51□□□□□ -1.69
CLIP1-205ENST00000514271 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
CLIP1-205ENST00000514271 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
CLIP1-205ENST00000514271 IGFL1Q6UW32 110 aa4.49□□□□□ -1.69
CLIP1-205ENST00000514271 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
CLIP1-205ENST00000514271 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
CLIP1-205ENST00000514271 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
CLIP1-205ENST00000514271 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
CLIP1-205ENST00000514271 KRTAP11-1Q8IUC1 163 aa4.48□□□□□ -1.69
CLIP1-205ENST00000514271 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
CLIP1-205ENST00000514271 HIGD2BQ4VC39 106 aa4.48□□□□□ -1.69
CLIP1-205ENST00000514271 C1orf137Q5JT78 98 aa4.47□□□□□ -1.69
CLIP1-205ENST00000514271 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
CLIP1-205ENST00000514271 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
CLIP1-205ENST00000514271 FAM168BA1KXE4 195 aa4.47□□□□□ -1.69
CLIP1-205ENST00000514271 KRTAP10-1P60331 282 aa4.47□□□□□ -1.69
CLIP1-205ENST00000514271 LIMD2Q9BT23 127 aa4.47□□□□□ -1.69
CLIP1-205ENST00000514271 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
CLIP1-205ENST00000514271 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
CLIP1-205ENST00000514271 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
CLIP1-205ENST00000514271 MOBPQ13875 183 aa4.45□□□□□ -1.7
CLIP1-205ENST00000514271 HYDINQ4G0P3 5121 aa4.45□□□□□ -1.7
CLIP1-205ENST00000514271 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
CLIP1-205ENST00000514271 Q8N1X5 172 aa4.44□□□□□ -1.7
CLIP1-205ENST00000514271 NDUFB1O75438 58 aa4.44□□□□□ -1.7
CLIP1-205ENST00000514271 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
CLIP1-205ENST00000514271 SRRM2Q9UQ35 2752 aaKnown RBP4.44□□□□□ -1.7
CLIP1-205ENST00000514271 LINC00483Q53H64 154 aa4.43□□□□□ -1.7
CLIP1-205ENST00000514271 TNXBP22105 4242 aa4.43□□□□□ -1.7
CLIP1-205ENST00000514271 A0A096LNI7 61 aa4.42□□□□□ -1.7
CLIP1-205ENST00000514271 RYR3Q15413 4870 aa4.42□□□□□ -1.7
CLIP1-205ENST00000514271 A8MWP4 228 aa4.41□□□□□ -1.7
CLIP1-205ENST00000514271 C8orf17Q9NRJ1 99 aa4.41□□□□□ -1.7
CLIP1-205ENST00000514271 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.7
CLIP1-205ENST00000514271 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.71
CLIP1-205ENST00000514271 HSPG2P98160 4391 aa4.4□□□□□ -1.71
CLIP1-205ENST00000514271 A6NED7 52 aa4.39□□□□□ -1.71
CLIP1-205ENST00000514271 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
CLIP1-205ENST00000514271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-205ENST00000514271 ROMO1P60602 79 aa4.39□□□□□ -1.71
CLIP1-205ENST00000514271 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
CLIP1-205ENST00000514271 IGKV2-24A0A0C4DH68 120 aa4.37□□□□□ -1.71
CLIP1-205ENST00000514271 SPINK6Q6UWN8 80 aa4.37□□□□□ -1.71
CLIP1-205ENST00000514271 Q5VSD8 79 aa4.36□□□□□ -1.71
CLIP1-205ENST00000514271 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
CLIP1-205ENST00000514271 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
CLIP1-205ENST00000514271 A0A1W2PNN7 141 aa4.36□□□□□ -1.71
CLIP1-205ENST00000514271 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
CLIP1-205ENST00000514271 COA5Q86WW8 74 aa4.34□□□□□ -1.71
CLIP1-205ENST00000514271 APOBP04114 4563 aaKnown RBP4.34□□□□□ -1.71
CLIP1-205ENST00000514271 HRES1P13985 223 aa4.34□□□□□ -1.72
CLIP1-205ENST00000514271 PRR15LQ9BU68 103 aa4.34□□□□□ -1.72
CLIP1-205ENST00000514271 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
CLIP1-205ENST00000514271 H0Y9P7 68 aa4.32□□□□□ -1.72
CLIP1-205ENST00000514271 PANO1I0J062 215 aa4.32□□□□□ -1.72
CLIP1-205ENST00000514271 PRR4Q16378 134 aa4.32□□□□□ -1.72
CLIP1-205ENST00000514271 IGLV7-43P04211 117 aa4.31□□□□□ -1.72
CLIP1-205ENST00000514271 KRTAP10-4P60372 401 aaPredicted RBP4.31□□□□□ -1.72
CLIP1-205ENST00000514271 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
CLIP1-205ENST00000514271 PSORS1C2Q9UIG4 136 aa4.3□□□□□ -1.72
CLIP1-205ENST00000514271 ZNF861PO60384 105 aa4.3□□□□□ -1.72
CLIP1-205ENST00000514271 TP53AIP1Q9HCN2 124 aa4.29□□□□□ -1.72
CLIP1-205ENST00000514271 RYR1P21817 5038 aa4.29□□□□□ -1.72
CLIP1-205ENST00000514271 SPINK7P58062 85 aa4.29□□□□□ -1.72
CLIP1-205ENST00000514271 DEFB105AQ8NG35 78 aa4.28□□□□□ -1.72
CLIP1-205ENST00000514271 A0A087WSZ3 146 aa4.28□□□□□ -1.72
CLIP1-205ENST00000514271 HERC2O95714 4834 aa4.27□□□□□ -1.73
CLIP1-205ENST00000514271 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
CLIP1-205ENST00000514271 P0C880 135 aa4.27□□□□□ -1.73
CLIP1-205ENST00000514271 DMAC1Q96GE9 116 aa4.26□□□□□ -1.73
CLIP1-205ENST00000514271 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
CLIP1-205ENST00000514271 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms