RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 RAB37Q96AX2 223 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 HIST1H2BLQ99880 126 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 SNHG12Q9BXW3 62 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 PRO1933Q9H354 126 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 A0A0G2JQZ4 141 aa1.96□□□□□ -2.1
HTT-210ENST00000512909 C9orf92A6NGG3 77 aa1.96□□□□□ -2.1
HTT-210ENST00000512909 SMIM11BQ8TCY0 68 aa1.96□□□□□ -2.1
HTT-210ENST00000512909 C14orf144Q96I85 54 aa1.96□□□□□ -2.1
HTT-210ENST00000512909 NHP2Q9NX24 153 aaKnown RBP1.96□□□□□ -2.1
HTT-210ENST00000512909 hADV29S1A0JD25 119 aa1.95□□□□□ -2.1
HTT-210ENST00000512909 ELOF1P60002 83 aaKnown RBP1.95□□□□□ -2.1
HTT-210ENST00000512909 SPATA45Q537H7 98 aa1.95□□□□□ -2.1
HTT-210ENST00000512909 C20orf166-AS1Q96NR2 134 aa1.95□□□□□ -2.1
HTT-210ENST00000512909 LIMD2Q9BT23 127 aa1.95□□□□□ -2.1
HTT-210ENST00000512909 VAMP8Q9BV40 100 aa1.95□□□□□ -2.1
HTT-210ENST00000512909 TRBV7-6A0A0J9YX20 115 aa1.94□□□□□ -2.1
HTT-210ENST00000512909 A0A1W2PNM2 257 aa1.94□□□□□ -2.1
HTT-210ENST00000512909 COX8AP10176 69 aa1.94□□□□□ -2.1
HTT-210ENST00000512909 FABP2P12104 132 aa1.94□□□□□ -2.1
HTT-210ENST00000512909 CTAG1AP78358 180 aa1.94□□□□□ -2.1
HTT-210ENST00000512909 LINC00575Q6W349 94 aa1.94□□□□□ -2.1
HTT-210ENST00000512909 FP248Q71RG6 208 aaPredicted RBP1.94□□□□□ -2.1
HTT-210ENST00000512909 TCL1BO95988 128 aa1.93□□□□□ -2.1
HTT-210ENST00000512909 TPRXLQ17RH7 258 aa1.93□□□□□ -2.1
HTT-210ENST00000512909 OCIAD2Q56VL3 154 aa1.93□□□□□ -2.1
HTT-210ENST00000512909 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
HTT-210ENST00000512909 Q6ZQY7 126 aa1.93□□□□□ -2.1
HTT-210ENST00000512909 A0A1B0GV72 72 aa1.92□□□□□ -2.1
HTT-210ENST00000512909 SPRR1BP22528 89 aa1.92□□□□□ -2.1
HTT-210ENST00000512909 MYCBP2O75592 4640 aa1.92□□□□□ -2.1
HTT-210ENST00000512909 DNAH8Q96JB1 4490 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 C8orf87E5RJ46 101 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 H0YGX0 51 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 H3BUT2 72 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 RPS29P62273 56 aaKnown RBP1.91□□□□□ -2.1
HTT-210ENST00000512909 PCOTHQ58A44 107 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.91□□□□□ -2.1
HTT-210ENST00000512909 PRO1854Q9UHT4 67 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 FAT1Q14517 4588 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 HERC1Q15751 4861 aa1.91□□□□□ -2.1
HTT-210ENST00000512909 IGLV5-48A0A075B6I7 105 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 H3BMG7 143 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 LST1O00453 97 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 DLEU1O43261 78 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 DNAL4O96015 105 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 COX6CP09669 75 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 C1orf195Q5TG92 126 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 Q6JHZ5 121 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 Q6Q795 121 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.11
HTT-210ENST00000512909 LRP1Q07954 4544 aaKnown RBP1.89□□□□□ -2.11
HTT-210ENST00000512909 ASB16-AS1Q495Z4 193 aa1.89□□□□□ -2.11
HTT-210ENST00000512909 ANKRD29Q8N6D5 301 aa1.89□□□□□ -2.11
HTT-210ENST00000512909 ZCCHC13Q8WW36 166 aaKnown RBP1.89□□□□□ -2.11
HTT-210ENST00000512909 CLEC2BQ92478 149 aa1.89□□□□□ -2.11
HTT-210ENST00000512909 Q96NJ1 140 aa1.89□□□□□ -2.11
HTT-210ENST00000512909 VPS25Q9BRG1 176 aa1.89□□□□□ -2.11
HTT-210ENST00000512909 HIGD1BQ9P298 99 aa1.89□□□□□ -2.11
HTT-210ENST00000512909 TRBV7-7A0A0K0K1E9 115 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 K7ERJ3 54 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 M0R2T5 61 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 FXYD2P54710 66 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 HSD52Q0P140 79 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 COX6B2Q6YFQ2 88 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 ATP11AUNQ6ZP68 121 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 C2orf91Q6ZV80 131 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 OBSCN-AS1Q96MR7 158 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 ORMDL1Q9P0S3 153 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 UQCR10Q9UDW1 63 aa1.88□□□□□ -2.11
HTT-210ENST00000512909 A0A087WSZ3 146 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 BATFQ16520 125 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 PYY3Q5JQD4 70 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 TEN1Q86WV5 123 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 PPDPFLQ8WWR9 84 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 SS18L2Q9UHA2 77 aa1.87□□□□□ -2.11
HTT-210ENST00000512909 A0A1B0GX51 115 aa1.86□□□□□ -2.11
HTT-210ENST00000512909 TMEM256-PLSCR3K7ERE1 68 aa1.86□□□□□ -2.11
HTT-210ENST00000512909 BAALC-AS2P0C853 105 aa1.86□□□□□ -2.11
HTT-210ENST00000512909 SIGMAR1Q99720 223 aa1.86□□□□□ -2.11
HTT-210ENST00000512909 NAA38Q9BRA0 125 aaKnown RBP1.86□□□□□ -2.11
HTT-210ENST00000512909 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
HTT-210ENST00000512909 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
HTT-210ENST00000512909 TRACP01848 142 aa1.85□□□□□ -2.11
HTT-210ENST00000512909 CCKP06307 115 aa1.85□□□□□ -2.11
HTT-210ENST00000512909 LINC00313P59037 77 aa1.85□□□□□ -2.11
HTT-210ENST00000512909 RPL37P61927 97 aaKnown RBP1.85□□□□□ -2.11
HTT-210ENST00000512909 RBM3P98179 157 aaKnown RBP1.85□□□□□ -2.11
HTT-210ENST00000512909 LYRM7Q5U5X0 104 aa1.85□□□□□ -2.11
HTT-210ENST00000512909 Q5XG85 94 aa1.85□□□□□ -2.11
HTT-210ENST00000512909 DSCR8Q96T75 97 aa1.85□□□□□ -2.11
HTT-210ENST00000512909 TRBV20-1A0A075B6N2 111 aa1.84□□□□□ -2.11
HTT-210ENST00000512909 C9JAW5 83 aa1.84□□□□□ -2.11
HTT-210ENST00000512909 ATXN8Q156A1 80 aa1.84□□□□□ -2.11
HTT-210ENST00000512909 FAM236DA0A1B0GTK5 79 aa1.83□□□□□ -2.12
HTT-210ENST00000512909 M0R143 59 aa1.83□□□□□ -2.12
HTT-210ENST00000512909 FAM236CP0DP71 79 aa1.83□□□□□ -2.12
HTT-210ENST00000512909 HMCN2Q8NDA2 5059 aa1.82□□□□□ -2.12
HTT-210ENST00000512909 UBR4Q5T4S7 5183 aa1.82□□□□□ -2.12
HTT-210ENST00000512909 TRBV7-4A0A0J9YYF1 115 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms