RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
MATR3-220ENST00000512876 DSCR8Q96T75 97 aa8.32□□□□□ -1.08
MATR3-220ENST00000512876 MT1FP04733 61 aa8.31□□□□□ -1.08
MATR3-220ENST00000512876 SCGB1C2P0DMR2 95 aa8.31□□□□□ -1.08
MATR3-220ENST00000512876 KRTAP9-7A8MTY7 169 aa8.3□□□□□ -1.08
MATR3-220ENST00000512876 C21orf62-AS1Q17RA5 79 aa8.3□□□□□ -1.08
MATR3-220ENST00000512876 J3KT08 172 aa8.29□□□□□ -1.08
MATR3-220ENST00000512876 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
MATR3-220ENST00000512876 C9JAW5 83 aa8.28□□□□□ -1.08
MATR3-220ENST00000512876 BAALC-AS2P0C853 105 aa8.28□□□□□ -1.08
MATR3-220ENST00000512876 Q6ZQT0 140 aa8.28□□□□□ -1.08
MATR3-220ENST00000512876 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
MATR3-220ENST00000512876 Q8N9P0 234 aaPredicted RBP8.25□□□□□ -1.09
MATR3-220ENST00000512876 KRTAP9-3Q9BYQ3 159 aa8.25□□□□□ -1.09
MATR3-220ENST00000512876 LCE2BO14633 110 aa8.24□□□□□ -1.09
MATR3-220ENST00000512876 TMA7Q9Y2S6 64 aaKnown RBP8.24□□□□□ -1.09
MATR3-220ENST00000512876 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
MATR3-220ENST00000512876 SPINK7P58062 85 aa8.23□□□□□ -1.09
MATR3-220ENST00000512876 A0A1B0GW54 56 aa8.21□□□□□ -1.1
MATR3-220ENST00000512876 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
MATR3-220ENST00000512876 MTURNQ8N3F0 131 aa8.21□□□□□ -1.1
MATR3-220ENST00000512876 LOC110117498A0A087WWA1 95 aa8.2□□□□□ -1.1
MATR3-220ENST00000512876 A8MWP4 228 aa8.2□□□□□ -1.1
MATR3-220ENST00000512876 JMJD7-PLA2G4BH0Y9G9 81 aa8.2□□□□□ -1.1
MATR3-220ENST00000512876 NDUFB1O75438 58 aa8.2□□□□□ -1.1
MATR3-220ENST00000512876 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
MATR3-220ENST00000512876 C8orf17Q9NRJ1 99 aa8.19□□□□□ -1.1
MATR3-220ENST00000512876 IGKV3D-7A0A0C4DH55 119 aa8.16□□□□□ -1.1
MATR3-220ENST00000512876 M0R143 59 aa8.16□□□□□ -1.1
MATR3-220ENST00000512876 NAA38Q9BRA0 125 aaKnown RBP8.16□□□□□ -1.1
MATR3-220ENST00000512876 PDE6GP18545 87 aa8.15□□□□□ -1.1
MATR3-220ENST00000512876 KRTAP19-1Q8IUB9 90 aa8.15□□□□□ -1.1
MATR3-220ENST00000512876 WFDC13Q8IUB5 93 aa8.12□□□□□ -1.11
MATR3-220ENST00000512876 C14orf132Q9NPU4 83 aa8.12□□□□□ -1.11
MATR3-220ENST00000512876 Q6ZVQ6 151 aa8.11□□□□□ -1.11
MATR3-220ENST00000512876 PRR15Q8IV56 129 aa8.1□□□□□ -1.11
MATR3-220ENST00000512876 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
MATR3-220ENST00000512876 MMP24-AS1A0A0U1RRL7 71 aa8.06□□□□□ -1.12
MATR3-220ENST00000512876 TMEM254Q8TBM7 123 aa8.05□□□□□ -1.12
MATR3-220ENST00000512876 NREPQ16612 68 aa8.04□□□□□ -1.12
MATR3-220ENST00000512876 MRPL34Q9BQ48 92 aaKnown RBP8.04□□□□□ -1.12
MATR3-220ENST00000512876 SMIM6P0DI80 62 aa8.02□□□□□ -1.13
MATR3-220ENST00000512876 K7EQZ3 153 aa8□□□□□ -1.13
MATR3-220ENST00000512876 KRTAP19-6Q3LI70 58 aa8□□□□□ -1.13
MATR3-220ENST00000512876 hDV103S1A0JD37 113 aa7.98□□□□□ -1.13
MATR3-220ENST00000512876 H3BT86 120 aa7.97□□□□□ -1.13
MATR3-220ENST00000512876 H1FX-AS1Q4G0G2 97 aa7.95□□□□□ -1.14
MATR3-220ENST00000512876 BATFQ16520 125 aa7.93□□□□□ -1.14
MATR3-220ENST00000512876 TSTD3H0UI37 97 aa7.92□□□□□ -1.14
MATR3-220ENST00000512876 MACF1Q9UPN3 7388 aaKnown RBP7.92□□□□□ -1.14
MATR3-220ENST00000512876 C9orf118A6NHY6 69 aa7.91□□□□□ -1.14
MATR3-220ENST00000512876 NDUFS5O43920 106 aa7.91□□□□□ -1.14
MATR3-220ENST00000512876 LINC00846Q9NV44 126 aa7.91□□□□□ -1.14
MATR3-220ENST00000512876 Q5W150 140 aa7.9□□□□□ -1.14
MATR3-220ENST00000512876 A0A1W2PPM0 123 aa7.89□□□□□ -1.15
MATR3-220ENST00000512876 BPY2O14599 106 aa7.89□□□□□ -1.15
MATR3-220ENST00000512876 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
MATR3-220ENST00000512876 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
MATR3-220ENST00000512876 TAX1BP3O14907 124 aa7.88□□□□□ -1.15
MATR3-220ENST00000512876 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
MATR3-220ENST00000512876 SYNE2Q8WXH0 6885 aaKnown RBP7.88□□□□□ -1.15
MATR3-220ENST00000512876 Q8N9L7 120 aa7.84□□□□□ -1.15
MATR3-220ENST00000512876 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
MATR3-220ENST00000512876 HCG22E2RYF7 251 aa7.8□□□□□ -1.16
MATR3-220ENST00000512876 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
MATR3-220ENST00000512876 CXCL6P80162 114 aa7.77□□□□□ -1.17
MATR3-220ENST00000512876 C4orf26Q17RF5 130 aa7.77□□□□□ -1.17
MATR3-220ENST00000512876 SPCS1Q9Y6A9 102 aa7.75□□□□□ -1.17
MATR3-220ENST00000512876 LOC105371267A0A1B0GV96 52 aa7.72□□□□□ -1.17
MATR3-220ENST00000512876 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
MATR3-220ENST00000512876 PRO0461Q9UI25 63 aa7.69□□□□□ -1.18
MATR3-220ENST00000512876 KRTAP6-3Q3LI67 103 aa7.68□□□□□ -1.18
MATR3-220ENST00000512876 UBL5Q9BZL1 73 aa7.68□□□□□ -1.18
MATR3-220ENST00000512876 C5orf47Q569G3 176 aa7.66□□□□□ -1.18
MATR3-220ENST00000512876 S4R3F8 94 aa7.62□□□□□ -1.19
MATR3-220ENST00000512876 K7EP34 96 aa7.61□□□□□ -1.19
MATR3-220ENST00000512876 MT1BP07438 61 aa7.6□□□□□ -1.19
MATR3-220ENST00000512876 C1orf64Q8NEQ6 169 aa7.6□□□□□ -1.19
MATR3-220ENST00000512876 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
MATR3-220ENST00000512876 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
MATR3-220ENST00000512876 COL5A1-AS1Q5SY13 56 aa7.59□□□□□ -1.19
MATR3-220ENST00000512876 LCA10Q71F78 164 aa7.59□□□□□ -1.19
MATR3-220ENST00000512876 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
MATR3-220ENST00000512876 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
MATR3-220ENST00000512876 KRTAP19-8Q3LI54 63 aa7.57□□□□□ -1.2
MATR3-220ENST00000512876 TP53AIP1Q9HCN2 124 aa7.57□□□□□ -1.2
MATR3-220ENST00000512876 Q5VV11 94 aa7.53□□□□□ -1.2
MATR3-220ENST00000512876 A6NN06 94 aa7.52□□□□□ -1.21
MATR3-220ENST00000512876 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
MATR3-220ENST00000512876 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
MATR3-220ENST00000512876 NEBP20929 6669 aa7.46□□□□□ -1.21
MATR3-220ENST00000512876 CYP4F30PQ9H0H9 118 aa7.46□□□□□ -1.22
MATR3-220ENST00000512876 KRTAP10-5P60370 271 aa7.45□□□□□ -1.22
MATR3-220ENST00000512876 GTF2H5Q6ZYL4 71 aa7.45□□□□□ -1.22
MATR3-220ENST00000512876 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
MATR3-220ENST00000512876 F8W1H4 67 aa7.44□□□□□ -1.22
MATR3-220ENST00000512876 ETDBQ3ZM63 59 aa7.44□□□□□ -1.22
MATR3-220ENST00000512876 A0A087WVE0 104 aa7.4□□□□□ -1.22
MATR3-220ENST00000512876 TRAV22A0A0B4J277 110 aa7.39□□□□□ -1.23
MATR3-220ENST00000512876 LOC101927531A0A1B0GV80 90 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms