RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 LYRM7Q5U5X0 104 aa4.46□□□□□ -1.7
SNF8-207ENST00000509995 UQCC3Q6UW78 93 aa4.46□□□□□ -1.7
SNF8-207ENST00000509995 IGKV3D-7A0A0C4DH55 119 aa4.45□□□□□ -1.7
SNF8-207ENST00000509995 SCGB1D4Q6XE38 83 aa4.44□□□□□ -1.7
SNF8-207ENST00000509995 MUSTN1Q8IVN3 82 aa4.44□□□□□ -1.7
SNF8-207ENST00000509995 H3BMG7 143 aa4.43□□□□□ -1.7
SNF8-207ENST00000509995 C12orf57Q99622 126 aa4.43□□□□□ -1.7
SNF8-207ENST00000509995 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SNF8-207ENST00000509995 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SNF8-207ENST00000509995 FABP4P15090 132 aa4.42□□□□□ -1.7
SNF8-207ENST00000509995 PRR15Q8IV56 129 aa4.41□□□□□ -1.7
SNF8-207ENST00000509995 TRBV7-4A0A0J9YYF1 115 aa4.4□□□□□ -1.71
SNF8-207ENST00000509995 TRGC2P03986 189 aa4.4□□□□□ -1.71
SNF8-207ENST00000509995 MT4P47944 62 aa4.4□□□□□ -1.71
SNF8-207ENST00000509995 LINC00310P59036 64 aa4.4□□□□□ -1.71
SNF8-207ENST00000509995 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
SNF8-207ENST00000509995 LCA10Q71F78 164 aa4.39□□□□□ -1.71
SNF8-207ENST00000509995 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
SNF8-207ENST00000509995 APOC3P02656 99 aa4.37□□□□□ -1.71
SNF8-207ENST00000509995 BVES-AS1Q5T3Y7 98 aa4.37□□□□□ -1.71
SNF8-207ENST00000509995 SVBPQ8N300 66 aa4.36□□□□□ -1.71
SNF8-207ENST00000509995 TMA7Q9Y2S6 64 aaKnown RBP4.36□□□□□ -1.71
SNF8-207ENST00000509995 SNAPINO95295 136 aa4.34□□□□□ -1.71
SNF8-207ENST00000509995 S4R3F8 94 aa4.34□□□□□ -1.71
SNF8-207ENST00000509995 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
SNF8-207ENST00000509995 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
SNF8-207ENST00000509995 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
SNF8-207ENST00000509995 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
SNF8-207ENST00000509995 ANKRD29Q8N6D5 301 aa4.32□□□□□ -1.72
SNF8-207ENST00000509995 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
SNF8-207ENST00000509995 TRACP01848 142 aa4.31□□□□□ -1.72
SNF8-207ENST00000509995 C4orf26Q17RF5 130 aa4.31□□□□□ -1.72
SNF8-207ENST00000509995 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
SNF8-207ENST00000509995 FABP2P12104 132 aa4.3□□□□□ -1.72
SNF8-207ENST00000509995 RBM3P98179 157 aaKnown RBP4.3□□□□□ -1.72
SNF8-207ENST00000509995 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
SNF8-207ENST00000509995 C8orf17Q9NRJ1 99 aa4.3□□□□□ -1.72
SNF8-207ENST00000509995 C7orf65Q6ZTY9 151 aa4.29□□□□□ -1.72
SNF8-207ENST00000509995 C2orf91Q6ZV80 131 aa4.29□□□□□ -1.72
SNF8-207ENST00000509995 LOC105371267A0A1B0GV96 52 aa4.28□□□□□ -1.72
SNF8-207ENST00000509995 J3KT08 172 aa4.28□□□□□ -1.72
SNF8-207ENST00000509995 SNCGO76070 127 aa4.28□□□□□ -1.72
SNF8-207ENST00000509995 CCKP06307 115 aa4.28□□□□□ -1.72
SNF8-207ENST00000509995 A0A1B0GV72 72 aa4.27□□□□□ -1.73
SNF8-207ENST00000509995 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
SNF8-207ENST00000509995 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SNF8-207ENST00000509995 Q6ZVQ6 151 aa4.27□□□□□ -1.73
SNF8-207ENST00000509995 NDUFB1O75438 58 aa4.26□□□□□ -1.73
SNF8-207ENST00000509995 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
SNF8-207ENST00000509995 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
SNF8-207ENST00000509995 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
SNF8-207ENST00000509995 S100A6P06703 90 aa4.23□□□□□ -1.73
SNF8-207ENST00000509995 PET117Q6UWS5 81 aa4.22□□□□□ -1.73
SNF8-207ENST00000509995 SMIM6P0DI80 62 aa4.21□□□□□ -1.74
SNF8-207ENST00000509995 H0YGX0 51 aa4.2□□□□□ -1.74
SNF8-207ENST00000509995 A8MUN3 132 aa4.19□□□□□ -1.74
SNF8-207ENST00000509995 K7EQZ3 153 aa4.19□□□□□ -1.74
SNF8-207ENST00000509995 MRPL34Q9BQ48 92 aaKnown RBP4.18□□□□□ -1.74
SNF8-207ENST00000509995 VPS25Q9BRG1 176 aa4.18□□□□□ -1.74
SNF8-207ENST00000509995 A0A1B0GX51 115 aa4.17□□□□□ -1.74
SNF8-207ENST00000509995 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
SNF8-207ENST00000509995 NDUFS5O43920 106 aa4.16□□□□□ -1.74
SNF8-207ENST00000509995 S100A2P29034 98 aa4.16□□□□□ -1.74
SNF8-207ENST00000509995 Q5W150 140 aa4.16□□□□□ -1.74
SNF8-207ENST00000509995 HIST1H2BKO60814 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BJP06899 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 PDE6GP18545 87 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BOP23527 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BBP33778 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BDP58876 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BCP62807 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST2H2BEQ16778 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BHQ93079 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BNQ99877 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 HIST1H2BMQ99879 126 aa4.15□□□□□ -1.75
SNF8-207ENST00000509995 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
SNF8-207ENST00000509995 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
SNF8-207ENST00000509995 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
SNF8-207ENST00000509995 SNRPEP62304 92 aaKnown RBP4.13□□□□□ -1.75
SNF8-207ENST00000509995 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
SNF8-207ENST00000509995 CYSTM1Q9H1C7 97 aa4.13□□□□□ -1.75
SNF8-207ENST00000509995 ATOH7Q8N100 152 aa4.12□□□□□ -1.75
SNF8-207ENST00000509995 Q6ZQT0 140 aa4.11□□□□□ -1.75
SNF8-207ENST00000509995 PCP4L1A6NKN8 68 aa4.1□□□□□ -1.75
SNF8-207ENST00000509995 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
SNF8-207ENST00000509995 KRTDAPP60985 99 aa4.1□□□□□ -1.75
SNF8-207ENST00000509995 C21orf62-AS1Q17RA5 79 aa4.1□□□□□ -1.75
SNF8-207ENST00000509995 ORMDL1Q9P0S3 153 aa4.1□□□□□ -1.75
SNF8-207ENST00000509995 hDV103S1A0JD37 113 aa4.08□□□□□ -1.76
SNF8-207ENST00000509995 H3BQ85 93 aa4.08□□□□□ -1.76
SNF8-207ENST00000509995 COA6Q5JTJ3 125 aaKnown RBP4.08□□□□□ -1.76
SNF8-207ENST00000509995 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
SNF8-207ENST00000509995 HIST3H2BBQ8N257 126 aa4.07□□□□□ -1.76
SNF8-207ENST00000509995 H0YAA0 97 aa4.06□□□□□ -1.76
SNF8-207ENST00000509995 DNAL4O96015 105 aa4.06□□□□□ -1.76
SNF8-207ENST00000509995 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
SNF8-207ENST00000509995 HIST1H2BLQ99880 126 aa4.05□□□□□ -1.76
SNF8-207ENST00000509995 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
SNF8-207ENST00000509995 MT1EP04732 61 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms