RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 IGHV6-1A0A0B4J1U7 121 aa11.42□□□□□ -0.58
HOXC9-203ENST00000508190 A0A1B0GVX0 72 aa11.42□□□□□ -0.58
HOXC9-203ENST00000508190 A8MWP4 228 aa11.42□□□□□ -0.58
HOXC9-203ENST00000508190 IGKV3D-7A0A0C4DH55 119 aa11.41□□□□□ -0.58
HOXC9-203ENST00000508190 NOTCH2NLQ7Z3S9 236 aa11.4□□□□□ -0.59
HOXC9-203ENST00000508190 CDIP1Q9H305 208 aa11.4□□□□□ -0.59
HOXC9-203ENST00000508190 K7EQZ3 153 aa11.39□□□□□ -0.59
HOXC9-203ENST00000508190 NDUFB1O75438 58 aa11.38□□□□□ -0.59
HOXC9-203ENST00000508190 Q8N9L7 120 aa11.37□□□□□ -0.59
HOXC9-203ENST00000508190 XP32Q5T750 250 aa11.35□□□□□ -0.59
HOXC9-203ENST00000508190 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
HOXC9-203ENST00000508190 LINC00313P59037 77 aa11.35□□□□□ -0.59
HOXC9-203ENST00000508190 K7ERU9 68 aa11.34□□□□□ -0.59
HOXC9-203ENST00000508190 CXCL6P80162 114 aa11.32□□□□□ -0.6
HOXC9-203ENST00000508190 C8orf87E5RJ46 101 aa11.31□□□□□ -0.6
HOXC9-203ENST00000508190 C8orf17Q9NRJ1 99 aa11.3□□□□□ -0.6
HOXC9-203ENST00000508190 KRTAP16-1A8MUX0 517 aa11.29□□□□□ -0.6
HOXC9-203ENST00000508190 LINC00643Q86TS7 51 aa11.29□□□□□ -0.6
HOXC9-203ENST00000508190 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
HOXC9-203ENST00000508190 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
HOXC9-203ENST00000508190 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
HOXC9-203ENST00000508190 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
HOXC9-203ENST00000508190 WFDC13Q8IUB5 93 aa11.19□□□□□ -0.62
HOXC9-203ENST00000508190 C20orf166-AS1Q96NR2 134 aa11.19□□□□□ -0.62
HOXC9-203ENST00000508190 RPL37P61927 97 aaKnown RBP11.19□□□□□ -0.62
HOXC9-203ENST00000508190 hDV103S1A0JD37 113 aa11.18□□□□□ -0.62
HOXC9-203ENST00000508190 A8MUU9 505 aa11.18□□□□□ -0.62
HOXC9-203ENST00000508190 Q75L30 129 aa11.18□□□□□ -0.62
HOXC9-203ENST00000508190 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
HOXC9-203ENST00000508190 HCG22E2RYF7 251 aa11.15□□□□□ -0.62
HOXC9-203ENST00000508190 CASC2Q6XLA1 102 aa11.15□□□□□ -0.62
HOXC9-203ENST00000508190 TMEM254Q8TBM7 123 aa11.15□□□□□ -0.62
HOXC9-203ENST00000508190 MRPL34Q9BQ48 92 aaKnown RBP11.14□□□□□ -0.63
HOXC9-203ENST00000508190 UBR4Q5T4S7 5183 aa11.13□□□□□ -0.63
HOXC9-203ENST00000508190 MUC17Q685J3 4493 aa11.12□□□□□ -0.63
HOXC9-203ENST00000508190 A0A087WVE0 104 aa11.11□□□□□ -0.63
HOXC9-203ENST00000508190 Q8N9P0 234 aaPredicted RBP11.11□□□□□ -0.63
HOXC9-203ENST00000508190 SEC61BP60468 96 aaKnown RBP11.1□□□□□ -0.63
HOXC9-203ENST00000508190 PCOTHQ58A44 107 aa11.1□□□□□ -0.63
HOXC9-203ENST00000508190 MT-ATP8P03928 68 aa11.09□□□□□ -0.63
HOXC9-203ENST00000508190 ATP11AUNQ6ZP68 121 aa11.05□□□□□ -0.64
HOXC9-203ENST00000508190 NDUFS5O43920 106 aa11.04□□□□□ -0.64
HOXC9-203ENST00000508190 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
HOXC9-203ENST00000508190 ZCCHC13Q8WW36 166 aaKnown RBP10.98□□□□□ -0.65
HOXC9-203ENST00000508190 KRTAP4-1Q9BYQ7 146 aa10.98□□□□□ -0.65
HOXC9-203ENST00000508190 IMUPQ9GZP8 106 aa10.95□□□□□ -0.66
HOXC9-203ENST00000508190 Q5W150 140 aa10.9□□□□□ -0.66
HOXC9-203ENST00000508190 MUC2Q02817 5179 aa10.86□□□□□ -0.67
HOXC9-203ENST00000508190 TP53AIP1Q9HCN2 124 aa10.85□□□□□ -0.67
HOXC9-203ENST00000508190 FAM236AA0A1B0GUQ0 79 aa10.83□□□□□ -0.68
HOXC9-203ENST00000508190 FAM236BA0A1B0GV22 79 aa10.83□□□□□ -0.68
HOXC9-203ENST00000508190 SCGB1A1P11684 91 aa10.79□□□□□ -0.68
HOXC9-203ENST00000508190 OCR1Q9BZK8 76 aa10.78□□□□□ -0.68
HOXC9-203ENST00000508190 UQCRQO14949 82 aa10.75□□□□□ -0.69
HOXC9-203ENST00000508190 SPINK7P58062 85 aa10.75□□□□□ -0.69
HOXC9-203ENST00000508190 TRAV22A0A0B4J277 110 aa10.73□□□□□ -0.69
HOXC9-203ENST00000508190 IGKV2D-30A0A075B6S6 120 aa10.72□□□□□ -0.69
HOXC9-203ENST00000508190 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
HOXC9-203ENST00000508190 H0Y9P7 68 aa10.68□□□□□ -0.7
HOXC9-203ENST00000508190 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
HOXC9-203ENST00000508190 HRES1P13985 223 aa10.67□□□□□ -0.7
HOXC9-203ENST00000508190 ATOX1O00244 68 aa10.63□□□□□ -0.71
HOXC9-203ENST00000508190 SMIM20Q8N5G0 67 aa10.61□□□□□ -0.71
HOXC9-203ENST00000508190 TRAV7A0A075B6U4 112 aa10.6□□□□□ -0.71
HOXC9-203ENST00000508190 KRTAP19-2Q3LHN2 52 aa10.6□□□□□ -0.71
HOXC9-203ENST00000508190 C5orf47Q569G3 176 aa10.59□□□□□ -0.71
HOXC9-203ENST00000508190 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
HOXC9-203ENST00000508190 MP68P56378 58 aa10.58□□□□□ -0.72
HOXC9-203ENST00000508190 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
HOXC9-203ENST00000508190 LINC00208Q96KT6 92 aa10.58□□□□□ -0.72
HOXC9-203ENST00000508190 FAT4Q6V0I7 4981 aa10.57□□□□□ -0.72
HOXC9-203ENST00000508190 C1orf64Q8NEQ6 169 aa10.56□□□□□ -0.72
HOXC9-203ENST00000508190 CYP4F30PQ9H0H9 118 aa10.56□□□□□ -0.72
HOXC9-203ENST00000508190 LCE2CQ5TA81 110 aa10.53□□□□□ -0.72
HOXC9-203ENST00000508190 RBM12B-AS1Q9P1G2 102 aa10.53□□□□□ -0.72
HOXC9-203ENST00000508190 A0A0U1RQV1 116 aa10.51□□□□□ -0.73
HOXC9-203ENST00000508190 COX6B2Q6YFQ2 88 aa10.51□□□□□ -0.73
HOXC9-203ENST00000508190 SERP2Q8N6R1 65 aa10.5□□□□□ -0.73
HOXC9-203ENST00000508190 H3BPC8 53 aa10.48□□□□□ -0.73
HOXC9-203ENST00000508190 FAM236DA0A1B0GTK5 79 aa10.48□□□□□ -0.73
HOXC9-203ENST00000508190 FAM236CP0DP71 79 aa10.48□□□□□ -0.73
HOXC9-203ENST00000508190 C4orf26Q17RF5 130 aa10.48□□□□□ -0.73
HOXC9-203ENST00000508190 KLKP1Q107X0 134 aa10.44□□□□□ -0.74
HOXC9-203ENST00000508190 SNURFQ9Y675 71 aa10.38□□□□□ -0.75
HOXC9-203ENST00000508190 ANAPC13Q9BS18 74 aa10.38□□□□□ -0.75
HOXC9-203ENST00000508190 COX7CP15954 63 aa10.37□□□□□ -0.75
HOXC9-203ENST00000508190 C20orf197Q8N268 126 aa10.37□□□□□ -0.75
HOXC9-203ENST00000508190 FLGP20930 4061 aaPredicted RBP10.35□□□□□ -0.75
HOXC9-203ENST00000508190 MT1HP80294 61 aa10.34□□□□□ -0.75
HOXC9-203ENST00000508190 KRTAP3-1Q9BYR8 98 aa10.34□□□□□ -0.75
HOXC9-203ENST00000508190 LCE2AQ5TA79 106 aaPredicted RBP10.29□□□□□ -0.76
HOXC9-203ENST00000508190 H1FX-AS1Q4G0G2 97 aa10.28□□□□□ -0.76
HOXC9-203ENST00000508190 M0R2T5 61 aa10.18□□□□□ -0.78
HOXC9-203ENST00000508190 CYSTM1Q9H1C7 97 aa10.18□□□□□ -0.78
HOXC9-203ENST00000508190 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
HOXC9-203ENST00000508190 A8MUN3 132 aa10.12□□□□□ -0.79
HOXC9-203ENST00000508190 DMAC1Q96GE9 116 aa10.12□□□□□ -0.79
HOXC9-203ENST00000508190 S4R3F8 94 aa10.12□□□□□ -0.79
HOXC9-203ENST00000508190 LCA10Q71F78 164 aa10.08□□□□□ -0.8
HOXC9-203ENST00000508190 H7BZZ5 65 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms