RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 ESRGQ1W209 222 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 DEFB112Q30KQ8 113 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.86□□□□□ -2.27
SRPK1-208ENST00000507292 WFDC9Q8NEX5 89 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 TMEM254Q8TBM7 123 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 LINC00474Q9P2X8 69 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 LRRK2Q5S007 2527 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 CREBBPQ92793 2442 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 CSMD3Q7Z407 3707 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 PKD1L2Q7Z442 2459 aa0.86□□□□□ -2.27
SRPK1-208ENST00000507292 DNAH5Q8TE73 4624 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 MYO18BQ8IUG5 2567 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 IGLV5-48A0A075B6I7 105 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 B4DSR2 109 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 FLNAP21333 2647 aaKnown RBP0.85□□□□□ -2.27
SRPK1-208ENST00000507292 LINC00158P58513 81 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 RBM3P98179 157 aaKnown RBP0.85□□□□□ -2.27
SRPK1-208ENST00000507292 DEFB136Q30KP8 78 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 RIF1Q5UIP0 2472 aaKnown RBP0.85□□□□□ -2.27
SRPK1-208ENST00000507292 KRTAP26-1Q6PEX3 210 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 CSPG4Q6UVK1 2322 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 Q6ZQY7 126 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 DEFB123Q8N688 67 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 WFDC11Q8NEX6 87 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 SPRR4Q96PI1 79 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 UNC79Q9P2D8 2635 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
SRPK1-208ENST00000507292 SNURFQ9Y675 71 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 NBASA2RRP1 2371 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 C2CD3Q4AC94 2353 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 PKHD1L1Q86WI1 4243 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 STARD9Q9P2P6 4700 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 SACSQ9NZJ4 4579 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 SPTBN4Q9H254 2564 aa0.85□□□□□ -2.27
SRPK1-208ENST00000507292 PTPN13Q12923 2485 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 TENM3Q9P273 2699 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 POLQO75417 2590 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 USP24Q9UPU5 2620 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 IGLV1-51P01701 117 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 SPRR1AP35321 89 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 SPAG11BQ08648 103 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 Q5VV11 94 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 DYNLRB2Q8TF09 96 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 BRK1Q8WUW1 75 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 DIRC1Q969H9 104 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 CCL19Q99731 98 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 C11orf68Q9H3H3 251 aaKnown RBP0.84□□□□□ -2.27
SRPK1-208ENST00000507292 KCNQ1DNQ9H478 68 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 NOP10Q9NPE3 64 aaKnown RBP0.84□□□□□ -2.27
SRPK1-208ENST00000507292 PLAC8Q9NZF1 115 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 TOMM7Q9P0U1 55 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 C6orf48Q9UBA6 75 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 LAMTOR3Q9UHA4 124 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 PKIGQ9Y2B9 76 aa0.84□□□□□ -2.27
SRPK1-208ENST00000507292 NSD1Q96L73 2696 aaPredicted RBP0.84□□□□□ -2.28
SRPK1-208ENST00000507292 PKHD1P08F94 4074 aa0.84□□□□□ -2.28
SRPK1-208ENST00000507292 PIEZO1Q92508 2521 aa0.84□□□□□ -2.28
SRPK1-208ENST00000507292 ZNF462Q96JM2 2506 aa0.84□□□□□ -2.28
SRPK1-208ENST00000507292 ABCA12Q86UK0 2595 aa0.84□□□□□ -2.28
SRPK1-208ENST00000507292 NAV2Q8IVL1 2488 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 ZFYVE26Q68DK2 2539 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 VPS13BQ7Z7G8 4022 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 ITPR2Q14571 2701 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 PKD1P98161 4303 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 SPG11Q96JI7 2443 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 TRAV22A0A0B4J277 110 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 LOC101927531A0A1B0GV80 90 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 ETDCA0A1B0GVM5 59 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 A6NN06 94 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 M0R378 163 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 HTN1P15515 57 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 HAMPP81172 84 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 ASB16-AS1Q495Z4 193 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 C9orf116Q5BN46 136 aaPredicted RBP0.83□□□□□ -2.28
SRPK1-208ENST00000507292 UNQ6190/PRO20217Q6UXQ8 127 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 LINC00269Q8N2A0 174 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 C9orf163Q8N9P6 203 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 WFDC10AQ9H1F0 79 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 PRO0255Q9UI72 69 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 MEGF8Q7Z7M0 2845 aa0.83□□□□□ -2.28
SRPK1-208ENST00000507292 FN1P02751 2386 aaKnown RBP0.82□□□□□ -2.28
SRPK1-208ENST00000507292 TEP1Q99973 2627 aaKnown RBP0.82□□□□□ -2.28
SRPK1-208ENST00000507292 TNXBP22105 4242 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 A0A096LPF7 62 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 HCG22E2RYF7 251 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 H3BNG1 76 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 K7EQZ3 153 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 NDUFB1O75438 58 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 UBE2BP63146 152 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 LELP1Q5T871 98 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 CLPSL2Q6UWE3 100 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 Q6ZRX8 168 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 PHF5AQ7RTV0 110 aaKnown RBP0.82□□□□□ -2.28
SRPK1-208ENST00000507292 FAT2Q9NYQ8 4349 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 HSPG2P98160 4391 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 KMT2BQ9UMN6 2715 aaPredicted RBP0.82□□□□□ -2.28
SRPK1-208ENST00000507292 SETD2Q9BYW2 2564 aaPredicted RBP0.82□□□□□ -2.28
SRPK1-208ENST00000507292 APOBP04114 4563 aaKnown RBP0.82□□□□□ -2.28
SRPK1-208ENST00000507292 HECTD1Q9ULT8 2610 aa0.82□□□□□ -2.28
SRPK1-208ENST00000507292 CCDC168Q8NDH2 2452 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms