RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
PDLIM7-212ENST00000504380 LINC00846Q9NV44 126 aa7.2□□□□□ -1.26
PDLIM7-212ENST00000504380 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
PDLIM7-212ENST00000504380 Q6ZVQ6 151 aa7.19□□□□□ -1.26
PDLIM7-212ENST00000504380 J3KT08 172 aa7.18□□□□□ -1.26
PDLIM7-212ENST00000504380 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
PDLIM7-212ENST00000504380 LINC00313P59037 77 aa7.16□□□□□ -1.26
PDLIM7-212ENST00000504380 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
PDLIM7-212ENST00000504380 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.26
PDLIM7-212ENST00000504380 A0A0U1RQV1 116 aa7.15□□□□□ -1.26
PDLIM7-212ENST00000504380 A8MWP4 228 aa7.14□□□□□ -1.27
PDLIM7-212ENST00000504380 BPY2O14599 106 aa7.14□□□□□ -1.27
PDLIM7-212ENST00000504380 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
PDLIM7-212ENST00000504380 NDUFB1O75438 58 aa7.13□□□□□ -1.27
PDLIM7-212ENST00000504380 UBL5Q9BZL1 73 aa7.13□□□□□ -1.27
PDLIM7-212ENST00000504380 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
PDLIM7-212ENST00000504380 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
PDLIM7-212ENST00000504380 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
PDLIM7-212ENST00000504380 K7EQZ3 153 aa7.11□□□□□ -1.27
PDLIM7-212ENST00000504380 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
PDLIM7-212ENST00000504380 Q8N9L7 120 aa7.11□□□□□ -1.27
PDLIM7-212ENST00000504380 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
PDLIM7-212ENST00000504380 PRR15Q8IV56 129 aa7.1□□□□□ -1.27
PDLIM7-212ENST00000504380 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
PDLIM7-212ENST00000504380 KRTAP4-1Q9BYQ7 146 aa7.09□□□□□ -1.27
PDLIM7-212ENST00000504380 Q75L30 129 aa7.08□□□□□ -1.28
PDLIM7-212ENST00000504380 A8MUU9 505 aa7.07□□□□□ -1.28
PDLIM7-212ENST00000504380 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
PDLIM7-212ENST00000504380 ACYP1P07311 99 aa7.06□□□□□ -1.28
PDLIM7-212ENST00000504380 MMP24-AS1A0A0U1RRL7 71 aa7.05□□□□□ -1.28
PDLIM7-212ENST00000504380 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
PDLIM7-212ENST00000504380 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
PDLIM7-212ENST00000504380 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
PDLIM7-212ENST00000504380 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
PDLIM7-212ENST00000504380 CXCL6P80162 114 aa6.99□□□□□ -1.29
PDLIM7-212ENST00000504380 Q8N9P0 234 aaPredicted RBP6.98□□□□□ -1.29
PDLIM7-212ENST00000504380 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
PDLIM7-212ENST00000504380 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
PDLIM7-212ENST00000504380 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
PDLIM7-212ENST00000504380 J3QR89 54 aa6.97□□□□□ -1.29
PDLIM7-212ENST00000504380 CASC2Q6XLA1 102 aa6.96□□□□□ -1.3
PDLIM7-212ENST00000504380 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
PDLIM7-212ENST00000504380 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
PDLIM7-212ENST00000504380 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
PDLIM7-212ENST00000504380 NDUFS5O43920 106 aa6.94□□□□□ -1.3
PDLIM7-212ENST00000504380 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
PDLIM7-212ENST00000504380 ZCCHC13Q8WW36 166 aaKnown RBP6.93□□□□□ -1.3
PDLIM7-212ENST00000504380 HIST1H4AP62805 103 aaKnown RBP6.91□□□□□ -1.3
PDLIM7-212ENST00000504380 ATP5EP2Q5VTU8 51 aa6.91□□□□□ -1.3
PDLIM7-212ENST00000504380 A0A087WVE0 104 aa6.87□□□□□ -1.31
PDLIM7-212ENST00000504380 K7ERU9 68 aa6.87□□□□□ -1.31
PDLIM7-212ENST00000504380 Q5W150 140 aa6.86□□□□□ -1.31
PDLIM7-212ENST00000504380 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
PDLIM7-212ENST00000504380 SPINK7P58062 85 aa6.81□□□□□ -1.32
PDLIM7-212ENST00000504380 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
PDLIM7-212ENST00000504380 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
PDLIM7-212ENST00000504380 HRES1P13985 223 aa6.78□□□□□ -1.32
PDLIM7-212ENST00000504380 IGKV2D-30A0A075B6S6 120 aa6.76□□□□□ -1.33
PDLIM7-212ENST00000504380 IGKV2-30P06310 120 aa6.76□□□□□ -1.33
PDLIM7-212ENST00000504380 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
PDLIM7-212ENST00000504380 TP53AIP1Q9HCN2 124 aa6.75□□□□□ -1.33
PDLIM7-212ENST00000504380 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
PDLIM7-212ENST00000504380 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
PDLIM7-212ENST00000504380 FAM236DA0A1B0GTK5 79 aa6.69□□□□□ -1.34
PDLIM7-212ENST00000504380 FAM236CP0DP71 79 aa6.69□□□□□ -1.34
PDLIM7-212ENST00000504380 UQCRQO14949 82 aa6.68□□□□□ -1.34
PDLIM7-212ENST00000504380 MT1HP80294 61 aa6.68□□□□□ -1.34
PDLIM7-212ENST00000504380 IMUPQ9GZP8 106 aa6.68□□□□□ -1.34
PDLIM7-212ENST00000504380 RBM12B-AS1Q9P1G2 102 aa6.68□□□□□ -1.34
PDLIM7-212ENST00000504380 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
PDLIM7-212ENST00000504380 H0Y9P7 68 aa6.65□□□□□ -1.34
PDLIM7-212ENST00000504380 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
PDLIM7-212ENST00000504380 OCR1Q9BZK8 76 aa6.65□□□□□ -1.34
PDLIM7-212ENST00000504380 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
PDLIM7-212ENST00000504380 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
PDLIM7-212ENST00000504380 C4orf26Q17RF5 130 aa6.61□□□□□ -1.35
PDLIM7-212ENST00000504380 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
PDLIM7-212ENST00000504380 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
PDLIM7-212ENST00000504380 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
PDLIM7-212ENST00000504380 M0R2T5 61 aa6.58□□□□□ -1.36
PDLIM7-212ENST00000504380 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
PDLIM7-212ENST00000504380 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
PDLIM7-212ENST00000504380 ATOX1O00244 68 aa6.57□□□□□ -1.36
PDLIM7-212ENST00000504380 C1orf64Q8NEQ6 169 aa6.57□□□□□ -1.36
PDLIM7-212ENST00000504380 C5orf47Q569G3 176 aa6.55□□□□□ -1.36
PDLIM7-212ENST00000504380 MP68P56378 58 aa6.54□□□□□ -1.36
PDLIM7-212ENST00000504380 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
PDLIM7-212ENST00000504380 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
PDLIM7-212ENST00000504380 KLKP1Q107X0 134 aa6.52□□□□□ -1.37
PDLIM7-212ENST00000504380 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
PDLIM7-212ENST00000504380 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.5□□□□□ -1.37
PDLIM7-212ENST00000504380 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
PDLIM7-212ENST00000504380 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
PDLIM7-212ENST00000504380 H3BPC8 53 aa6.47□□□□□ -1.37
PDLIM7-212ENST00000504380 LORP23490 312 aaPredicted RBP6.46□□□□□ -1.38
PDLIM7-212ENST00000504380 SERP2Q8N6R1 65 aa6.42□□□□□ -1.38
PDLIM7-212ENST00000504380 SNURFQ9Y675 71 aa6.41□□□□□ -1.38
PDLIM7-212ENST00000504380 S4R3F8 94 aa6.38□□□□□ -1.39
PDLIM7-212ENST00000504380 C20orf197Q8N268 126 aa6.37□□□□□ -1.39
PDLIM7-212ENST00000504380 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 289.3 ms