RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 DEFB124Q8NES8 71 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 C11orf45Q8TAV5 145 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 LRCOL1A6NCL2 159 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 KRTAP29-1A8MX34 341 aaPredicted RBP1.79□□□□□ -2.12
NEDD4-204ENST00000503468 K7ERS5 55 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 DEFB130BP0DP73 79 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 DEFB130AP0DP74 79 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 ACYP2P14621 99 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 WFDC13Q8IUB5 93 aa1.79□□□□□ -2.12
NEDD4-204ENST00000503468 Q8N377 158 aa1.78□□□□□ -2.12
NEDD4-204ENST00000503468 KLK12Q9UKR0 248 aa1.78□□□□□ -2.12
NEDD4-204ENST00000503468 UBE2DNLQ8IWF7 75 aa1.78□□□□□ -2.12
NEDD4-204ENST00000503468 PLAC8Q9NZF1 115 aa1.78□□□□□ -2.12
NEDD4-204ENST00000503468 K7EQZ3 153 aa1.78□□□□□ -2.13
NEDD4-204ENST00000503468 A0A087WSZ3 146 aa1.77□□□□□ -2.13
NEDD4-204ENST00000503468 J3QL48 77 aa1.77□□□□□ -2.13
NEDD4-204ENST00000503468 SPATA8Q6RVD6 105 aa1.77□□□□□ -2.13
NEDD4-204ENST00000503468 C6orf48Q9UBA6 75 aa1.77□□□□□ -2.13
NEDD4-204ENST00000503468 LORP23490 312 aaPredicted RBP1.77□□□□□ -2.13
NEDD4-204ENST00000503468 ST20-AS1Q8NBB2 130 aa1.77□□□□□ -2.13
NEDD4-204ENST00000503468 SLURP1P55000 103 aa1.77□□□□□ -2.13
NEDD4-204ENST00000503468 C7orf33Q8WU49 177 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 IGLV10-54A0A075B6I4 117 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 IGHV6-1A0A0B4J1U7 121 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 A0A1B0GU69 56 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 KRTAP7-1Q8IUC3 87 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 A0A1B0GVY2 172 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 LINC00476Q8WZB0 136 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 LINC00313P59037 77 aa1.76□□□□□ -2.13
NEDD4-204ENST00000503468 DEFB113Q30KQ7 82 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 WFDC10BQ8IUB3 73 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 FAM229AH3BQW9 127 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 C14orf177Q52M58 125 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 CCL19Q99731 98 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 KRTAP10-3P60369 221 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 DEFB105AQ8NG35 78 aa1.75□□□□□ -2.13
NEDD4-204ENST00000503468 DNAH10OSP0CZ25 163 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 LINC01556Q5JQF7 62 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 IGKV2-24A0A0C4DH68 120 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 CLPSL2Q6UWE3 100 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 DMAC1Q96GE9 116 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 LINC00472Q9H8W2 130 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 ZNF706Q9Y5V0 76 aaPredicted RBP1.74□□□□□ -2.13
NEDD4-204ENST00000503468 LINC00483Q53H64 154 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 IGLV1-50A0A075B6I6 118 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 INAFM1C9JVW0 142 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 C15orf56Q8N910 161 aa1.74□□□□□ -2.13
NEDD4-204ENST00000503468 RTL8CO15255 209 aa1.73□□□□□ -2.13
NEDD4-204ENST00000503468 MRPL34Q9BQ48 92 aaKnown RBP1.73□□□□□ -2.13
NEDD4-204ENST00000503468 DMBT1Q9UGM3 2413 aaPredicted RBP1.73□□□□□ -2.13
NEDD4-204ENST00000503468 IGFL1Q6UW32 110 aa1.73□□□□□ -2.13
NEDD4-204ENST00000503468 MMP24-AS1A0A0U1RRL7 71 aa1.73□□□□□ -2.13
NEDD4-204ENST00000503468 CHTF8P0CG12 524 aa1.73□□□□□ -2.13
NEDD4-204ENST00000503468 REG3GQ6UW15 175 aa1.73□□□□□ -2.13
NEDD4-204ENST00000503468 C8orf17Q9NRJ1 99 aa1.73□□□□□ -2.13
NEDD4-204ENST00000503468 DEFB136Q30KP8 78 aa1.72□□□□□ -2.13
NEDD4-204ENST00000503468 Q8NDZ9 215 aa1.72□□□□□ -2.13
NEDD4-204ENST00000503468 SPINK7P58062 85 aa1.72□□□□□ -2.13
NEDD4-204ENST00000503468 HRES1P13985 223 aa1.72□□□□□ -2.13
NEDD4-204ENST00000503468 A0A096LPF7 62 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 A0A1B0GVX0 72 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 PCOTHQ58A44 107 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 C1orf134Q5TEV5 83 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 PRB1P04280 392 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 LY6G6CO95867 125 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 C10orf99Q6UWK7 81 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 PRB2P02812 416 aaPredicted RBP1.71□□□□□ -2.14
NEDD4-204ENST00000503468 ROMO1P60602 79 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 C18orf65Q6ZTR6 163 aa1.71□□□□□ -2.14
NEDD4-204ENST00000503468 DNAJC9-AS1A6NH13 148 aa1.7□□□□□ -2.14
NEDD4-204ENST00000503468 HTN3P15516 51 aa1.7□□□□□ -2.14
NEDD4-204ENST00000503468 SMR3AQ99954 134 aa1.7□□□□□ -2.14
NEDD4-204ENST00000503468 CSMD1Q96PZ7 3565 aa1.7□□□□□ -2.14
NEDD4-204ENST00000503468 KRTAP10-9P60411 292 aa1.7□□□□□ -2.14
NEDD4-204ENST00000503468 PRAC1Q96KF2 57 aa1.69□□□□□ -2.14
NEDD4-204ENST00000503468 A8MU10 97 aa1.69□□□□□ -2.14
NEDD4-204ENST00000503468 IGLV7-43P04211 117 aa1.69□□□□□ -2.14
NEDD4-204ENST00000503468 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
NEDD4-204ENST00000503468 SSBP3-AS1Q7Z2R9 100 aa1.69□□□□□ -2.14
NEDD4-204ENST00000503468 DEFB135Q30KP9 77 aa1.68□□□□□ -2.14
NEDD4-204ENST00000503468 A0A0A0MQY5 61 aa1.68□□□□□ -2.14
NEDD4-204ENST00000503468 ANAPC11Q9NYG5 84 aa1.68□□□□□ -2.14
NEDD4-204ENST00000503468 MUC2Q02817 5179 aa1.68□□□□□ -2.14
NEDD4-204ENST00000503468 CSAG1Q6PB30 78 aa1.68□□□□□ -2.14
NEDD4-204ENST00000503468 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
NEDD4-204ENST00000503468 KRTAP19-4Q3LI73 84 aa1.67□□□□□ -2.14
NEDD4-204ENST00000503468 DEFB116Q30KQ4 102 aa1.66□□□□□ -2.14
NEDD4-204ENST00000503468 FLGP20930 4061 aaPredicted RBP1.65□□□□□ -2.14
NEDD4-204ENST00000503468 KRTAP16-1A8MUX0 517 aa1.65□□□□□ -2.14
NEDD4-204ENST00000503468 KRTAP1-4P0C5Y4 121 aa1.65□□□□□ -2.15
NEDD4-204ENST00000503468 KRTAP10-8P60410 259 aa1.65□□□□□ -2.15
NEDD4-204ENST00000503468 NUPR2A6NF83 97 aa1.65□□□□□ -2.15
NEDD4-204ENST00000503468 ZNF861PO60384 105 aa1.65□□□□□ -2.15
NEDD4-204ENST00000503468 PRLHP81277 87 aa1.64□□□□□ -2.15
NEDD4-204ENST00000503468 LOC100996750A0A140TA64 210 aa1.64□□□□□ -2.15
NEDD4-204ENST00000503468 KRTAP4-6Q9BYQ5 205 aa1.64□□□□□ -2.15
NEDD4-204ENST00000503468 IGKV2-30P06310 120 aa1.64□□□□□ -2.15
NEDD4-204ENST00000503468 Q5W150 140 aa1.64□□□□□ -2.15
NEDD4-204ENST00000503468 IGKV2D-30A0A075B6S6 120 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms