RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 BAALC-AS2P0C853 105 aa6.11□□□□□ -1.43
ERCC8-208ENST00000497892 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
ERCC8-208ENST00000497892 CCKP06307 115 aa6.09□□□□□ -1.43
ERCC8-208ENST00000497892 RBM3P98179 157 aaKnown RBP6.09□□□□□ -1.43
ERCC8-208ENST00000497892 Q96NJ1 140 aa6.09□□□□□ -1.43
ERCC8-208ENST00000497892 A0A0U1RQV1 116 aa6.08□□□□□ -1.44
ERCC8-208ENST00000497892 TAX1BP3O14907 124 aa6.08□□□□□ -1.44
ERCC8-208ENST00000497892 DSCR8Q96T75 97 aa6.07□□□□□ -1.44
ERCC8-208ENST00000497892 A0A1W2PPM0 123 aa6.06□□□□□ -1.44
ERCC8-208ENST00000497892 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
ERCC8-208ENST00000497892 C9JAW5 83 aa6.05□□□□□ -1.44
ERCC8-208ENST00000497892 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
ERCC8-208ENST00000497892 JMJD7-PLA2G4BH0Y9G9 81 aa6.04□□□□□ -1.44
ERCC8-208ENST00000497892 PCOTHQ58A44 107 aa6.04□□□□□ -1.44
ERCC8-208ENST00000497892 OBSCN-AS1Q96MR7 158 aa6.04□□□□□ -1.44
ERCC8-208ENST00000497892 VPS25Q9BRG1 176 aa6.04□□□□□ -1.44
ERCC8-208ENST00000497892 SIGMAR1Q99720 223 aa6.03□□□□□ -1.44
ERCC8-208ENST00000497892 FAT4Q6V0I7 4981 aa6.02□□□□□ -1.45
ERCC8-208ENST00000497892 LOC110117498A0A087WWA1 95 aa6.02□□□□□ -1.45
ERCC8-208ENST00000497892 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
ERCC8-208ENST00000497892 Q6ZQT0 140 aa6.01□□□□□ -1.45
ERCC8-208ENST00000497892 H3BT86 120 aa6□□□□□ -1.45
ERCC8-208ENST00000497892 IGKV4-1P06312 121 aa6□□□□□ -1.45
ERCC8-208ENST00000497892 PDE6GP18545 87 aa6□□□□□ -1.45
ERCC8-208ENST00000497892 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
ERCC8-208ENST00000497892 Q75L30 129 aa5.99□□□□□ -1.45
ERCC8-208ENST00000497892 C14orf132Q9NPU4 83 aa5.99□□□□□ -1.45
ERCC8-208ENST00000497892 A0A1B0GW54 56 aa5.98□□□□□ -1.45
ERCC8-208ENST00000497892 MTURNQ8N3F0 131 aa5.98□□□□□ -1.45
ERCC8-208ENST00000497892 SPCS1Q9Y6A9 102 aa5.98□□□□□ -1.45
ERCC8-208ENST00000497892 DEFB116Q30KQ4 102 aa5.97□□□□□ -1.45
ERCC8-208ENST00000497892 DSCR10P59022 87 aa5.96□□□□□ -1.46
ERCC8-208ENST00000497892 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.46
ERCC8-208ENST00000497892 PCP4L1A6NKN8 68 aa5.94□□□□□ -1.46
ERCC8-208ENST00000497892 A8MUU9 505 aa5.94□□□□□ -1.46
ERCC8-208ENST00000497892 J3KT08 172 aa5.94□□□□□ -1.46
ERCC8-208ENST00000497892 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
ERCC8-208ENST00000497892 LINC00313P59037 77 aa5.93□□□□□ -1.46
ERCC8-208ENST00000497892 ATP11AUNQ6ZP68 121 aa5.93□□□□□ -1.46
ERCC8-208ENST00000497892 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
ERCC8-208ENST00000497892 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
ERCC8-208ENST00000497892 K7EP34 96 aa5.92□□□□□ -1.46
ERCC8-208ENST00000497892 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
ERCC8-208ENST00000497892 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
ERCC8-208ENST00000497892 C8orf87E5RJ46 101 aa5.9□□□□□ -1.46
ERCC8-208ENST00000497892 PRO0461Q9UI25 63 aa5.89□□□□□ -1.47
ERCC8-208ENST00000497892 A8MWP4 228 aa5.87□□□□□ -1.47
ERCC8-208ENST00000497892 NDUFB1O75438 58 aa5.86□□□□□ -1.47
ERCC8-208ENST00000497892 NREPQ16612 68 aa5.86□□□□□ -1.47
ERCC8-208ENST00000497892 GTF2H5Q6ZYL4 71 aa5.85□□□□□ -1.47
ERCC8-208ENST00000497892 IGKV3D-7A0A0C4DH55 119 aa5.84□□□□□ -1.47
ERCC8-208ENST00000497892 PRR15Q8IV56 129 aa5.82□□□□□ -1.48
ERCC8-208ENST00000497892 C8orf17Q9NRJ1 99 aa5.82□□□□□ -1.48
ERCC8-208ENST00000497892 F8W1H4 67 aa5.8□□□□□ -1.48
ERCC8-208ENST00000497892 MT1HP80294 61 aa5.8□□□□□ -1.48
ERCC8-208ENST00000497892 Q6ZVQ6 151 aa5.8□□□□□ -1.48
ERCC8-208ENST00000497892 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
ERCC8-208ENST00000497892 K7EQZ3 153 aa5.79□□□□□ -1.48
ERCC8-208ENST00000497892 COX6B2Q6YFQ2 88 aa5.79□□□□□ -1.48
ERCC8-208ENST00000497892 BPY2O14599 106 aa5.78□□□□□ -1.48
ERCC8-208ENST00000497892 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
ERCC8-208ENST00000497892 ZCCHC13Q8WW36 166 aaKnown RBP5.77□□□□□ -1.49
ERCC8-208ENST00000497892 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
ERCC8-208ENST00000497892 ETDBQ3ZM63 59 aa5.75□□□□□ -1.49
ERCC8-208ENST00000497892 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
ERCC8-208ENST00000497892 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
ERCC8-208ENST00000497892 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
ERCC8-208ENST00000497892 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
ERCC8-208ENST00000497892 hDV103S1A0JD37 113 aa5.72□□□□□ -1.49
ERCC8-208ENST00000497892 Q8N9L7 120 aa5.72□□□□□ -1.49
ERCC8-208ENST00000497892 HRES1P13985 223 aa5.71□□□□□ -1.5
ERCC8-208ENST00000497892 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
ERCC8-208ENST00000497892 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
ERCC8-208ENST00000497892 M0R2T5 61 aa5.68□□□□□ -1.5
ERCC8-208ENST00000497892 SPINK7P58062 85 aa5.68□□□□□ -1.5
ERCC8-208ENST00000497892 NDUFS5O43920 106 aa5.67□□□□□ -1.5
ERCC8-208ENST00000497892 CASC2Q6XLA1 102 aa5.67□□□□□ -1.5
ERCC8-208ENST00000497892 WFDC13Q8IUB5 93 aa5.67□□□□□ -1.5
ERCC8-208ENST00000497892 KRTAP10-6P60371 365 aaPredicted RBP5.66□□□□□ -1.5
ERCC8-208ENST00000497892 RBM12B-AS1Q9P1G2 102 aa5.66□□□□□ -1.5
ERCC8-208ENST00000497892 CXCL6P80162 114 aa5.65□□□□□ -1.5
ERCC8-208ENST00000497892 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
ERCC8-208ENST00000497892 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
ERCC8-208ENST00000497892 A0A1B0GV90 55 aa5.63□□□□□ -1.51
ERCC8-208ENST00000497892 FAM240AA0A1B0GVK7 77 aa5.63□□□□□ -1.51
ERCC8-208ENST00000497892 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
ERCC8-208ENST00000497892 ACYP1P07311 99 aa5.63□□□□□ -1.51
ERCC8-208ENST00000497892 Q5W150 140 aa5.6□□□□□ -1.51
ERCC8-208ENST00000497892 ATP5EP2Q5VTU8 51 aa5.57□□□□□ -1.52
ERCC8-208ENST00000497892 C7orf65Q6ZTY9 151 aa5.56□□□□□ -1.52
ERCC8-208ENST00000497892 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
ERCC8-208ENST00000497892 IGKV2-30P06310 120 aa5.55□□□□□ -1.52
ERCC8-208ENST00000497892 TP53AIP1Q9HCN2 124 aa5.53□□□□□ -1.52
ERCC8-208ENST00000497892 LINC00643Q86TS7 51 aa5.5□□□□□ -1.53
ERCC8-208ENST00000497892 HIST1H4AP62805 103 aaKnown RBP5.48□□□□□ -1.53
ERCC8-208ENST00000497892 H1FX-AS1Q4G0G2 97 aa5.46□□□□□ -1.54
ERCC8-208ENST00000497892 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.54
ERCC8-208ENST00000497892 J3QR89 54 aa5.45□□□□□ -1.54
ERCC8-208ENST00000497892 MT2AP02795 61 aa5.45□□□□□ -1.54
ERCC8-208ENST00000497892 C4orf26Q17RF5 130 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms