RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 CXCL6P80162 114 aa5.36□□□□□ -1.55
ACTN4-207ENST00000495553 LINC00643Q86TS7 51 aa5.36□□□□□ -1.55
ACTN4-207ENST00000495553 DEFB116Q30KQ4 102 aa5.35□□□□□ -1.55
ACTN4-207ENST00000495553 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.55
ACTN4-207ENST00000495553 A8MWP4 228 aa5.34□□□□□ -1.55
ACTN4-207ENST00000495553 Q96NJ1 140 aa5.34□□□□□ -1.55
ACTN4-207ENST00000495553 IGHV6-1A0A0B4J1U7 121 aa5.31□□□□□ -1.56
ACTN4-207ENST00000495553 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
ACTN4-207ENST00000495553 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
ACTN4-207ENST00000495553 PRR15Q8IV56 129 aa5.3□□□□□ -1.56
ACTN4-207ENST00000495553 IGKV3D-7A0A0C4DH55 119 aa5.29□□□□□ -1.56
ACTN4-207ENST00000495553 LINC00313P59037 77 aa5.29□□□□□ -1.56
ACTN4-207ENST00000495553 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
ACTN4-207ENST00000495553 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
ACTN4-207ENST00000495553 K7EQZ3 153 aa5.28□□□□□ -1.56
ACTN4-207ENST00000495553 DSCR10P59022 87 aa5.28□□□□□ -1.56
ACTN4-207ENST00000495553 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
ACTN4-207ENST00000495553 RNF213Q63HN8 5207 aa5.26□□□□□ -1.57
ACTN4-207ENST00000495553 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
ACTN4-207ENST00000495553 Q8N9L7 120 aa5.25□□□□□ -1.57
ACTN4-207ENST00000495553 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
ACTN4-207ENST00000495553 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
ACTN4-207ENST00000495553 hDV103S1A0JD37 113 aa5.23□□□□□ -1.57
ACTN4-207ENST00000495553 HCG22E2RYF7 251 aa5.23□□□□□ -1.57
ACTN4-207ENST00000495553 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
ACTN4-207ENST00000495553 CASC2Q6XLA1 102 aa5.23□□□□□ -1.57
ACTN4-207ENST00000495553 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
ACTN4-207ENST00000495553 MMP24-AS1A0A0U1RRL7 71 aa5.21□□□□□ -1.58
ACTN4-207ENST00000495553 TMEM254Q8TBM7 123 aa5.21□□□□□ -1.58
ACTN4-207ENST00000495553 NDUFS5O43920 106 aa5.2□□□□□ -1.58
ACTN4-207ENST00000495553 MT-ATP8P03928 68 aa5.2□□□□□ -1.58
ACTN4-207ENST00000495553 WFDC13Q8IUB5 93 aa5.2□□□□□ -1.58
ACTN4-207ENST00000495553 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
ACTN4-207ENST00000495553 SCGB1A1P11684 91 aa5.18□□□□□ -1.58
ACTN4-207ENST00000495553 NOTCH2NLQ7Z3S9 236 aa5.18□□□□□ -1.58
ACTN4-207ENST00000495553 XP32Q5T750 250 aa5.17□□□□□ -1.58
ACTN4-207ENST00000495553 Q75L30 129 aa5.17□□□□□ -1.58
ACTN4-207ENST00000495553 MUC2Q02817 5179 aa5.17□□□□□ -1.58
ACTN4-207ENST00000495553 A0A087WVE0 104 aa5.16□□□□□ -1.58
ACTN4-207ENST00000495553 ATP11AUNQ6ZP68 121 aa5.16□□□□□ -1.58
ACTN4-207ENST00000495553 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
ACTN4-207ENST00000495553 TP53AIP1Q9HCN2 124 aa5.16□□□□□ -1.58
ACTN4-207ENST00000495553 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
ACTN4-207ENST00000495553 SEC61BP60468 96 aaKnown RBP5.15□□□□□ -1.59
ACTN4-207ENST00000495553 Q8N9P0 234 aaPredicted RBP5.15□□□□□ -1.59
ACTN4-207ENST00000495553 A8MUU9 505 aa5.14□□□□□ -1.59
ACTN4-207ENST00000495553 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
ACTN4-207ENST00000495553 FAM236AA0A1B0GUQ0 79 aa5.12□□□□□ -1.59
ACTN4-207ENST00000495553 FAM236BA0A1B0GV22 79 aa5.12□□□□□ -1.59
ACTN4-207ENST00000495553 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
ACTN4-207ENST00000495553 ATOX1O00244 68 aa5.1□□□□□ -1.59
ACTN4-207ENST00000495553 UQCRQO14949 82 aa5.1□□□□□ -1.59
ACTN4-207ENST00000495553 ZCCHC13Q8WW36 166 aaKnown RBP5.09□□□□□ -1.59
ACTN4-207ENST00000495553 TRAV22A0A0B4J277 110 aa5.06□□□□□ -1.6
ACTN4-207ENST00000495553 A0A0U1RQV1 116 aa5.06□□□□□ -1.6
ACTN4-207ENST00000495553 MP68P56378 58 aa5.06□□□□□ -1.6
ACTN4-207ENST00000495553 PCOTHQ58A44 107 aa5.06□□□□□ -1.6
ACTN4-207ENST00000495553 TRAV7A0A075B6U4 112 aa5.04□□□□□ -1.6
ACTN4-207ENST00000495553 C5orf47Q569G3 176 aa5.04□□□□□ -1.6
ACTN4-207ENST00000495553 OCR1Q9BZK8 76 aa5.04□□□□□ -1.6
ACTN4-207ENST00000495553 FAT4Q6V0I7 4981 aa5.04□□□□□ -1.6
ACTN4-207ENST00000495553 H0Y9P7 68 aa5.02□□□□□ -1.61
ACTN4-207ENST00000495553 H3BPC8 53 aa5.01□□□□□ -1.61
ACTN4-207ENST00000495553 LOC101927531A0A1B0GV80 90 aa5□□□□□ -1.61
ACTN4-207ENST00000495553 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
ACTN4-207ENST00000495553 SERP2Q8N6R1 65 aa5□□□□□ -1.61
ACTN4-207ENST00000495553 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
ACTN4-207ENST00000495553 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
ACTN4-207ENST00000495553 Q5W150 140 aa4.99□□□□□ -1.61
ACTN4-207ENST00000495553 ANAPC13Q9BS18 74 aa4.99□□□□□ -1.61
ACTN4-207ENST00000495553 C1orf64Q8NEQ6 169 aa4.98□□□□□ -1.61
ACTN4-207ENST00000495553 KRTAP4-1Q9BYQ7 146 aa4.98□□□□□ -1.61
ACTN4-207ENST00000495553 SPINK7P58062 85 aa4.97□□□□□ -1.61
ACTN4-207ENST00000495553 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
ACTN4-207ENST00000495553 COX7CP15954 63 aa4.94□□□□□ -1.62
ACTN4-207ENST00000495553 RBM12B-AS1Q9P1G2 102 aa4.94□□□□□ -1.62
ACTN4-207ENST00000495553 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
ACTN4-207ENST00000495553 C20orf197Q8N268 126 aa4.91□□□□□ -1.62
ACTN4-207ENST00000495553 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
ACTN4-207ENST00000495553 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
ACTN4-207ENST00000495553 LCE2BO14633 110 aa4.88□□□□□ -1.63
ACTN4-207ENST00000495553 NDUFC1O43677 76 aa4.87□□□□□ -1.63
ACTN4-207ENST00000495553 KLKP1Q107X0 134 aa4.87□□□□□ -1.63
ACTN4-207ENST00000495553 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
ACTN4-207ENST00000495553 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
ACTN4-207ENST00000495553 HRES1P13985 223 aa4.85□□□□□ -1.63
ACTN4-207ENST00000495553 C4orf26Q17RF5 130 aa4.84□□□□□ -1.63
ACTN4-207ENST00000495553 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
ACTN4-207ENST00000495553 KRTAP19-2Q3LHN2 52 aa4.83□□□□□ -1.64
ACTN4-207ENST00000495553 LCE2CQ5TA81 110 aa4.82□□□□□ -1.64
ACTN4-207ENST00000495553 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
ACTN4-207ENST00000495553 A8MUN3 132 aa4.81□□□□□ -1.64
ACTN4-207ENST00000495553 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
ACTN4-207ENST00000495553 CCDC179H3BU77 68 aa4.8□□□□□ -1.64
ACTN4-207ENST00000495553 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
ACTN4-207ENST00000495553 H1FX-AS1Q4G0G2 97 aa4.78□□□□□ -1.64
ACTN4-207ENST00000495553 MT1HP80294 61 aa4.77□□□□□ -1.65
ACTN4-207ENST00000495553 M0R2T5 61 aa4.76□□□□□ -1.65
ACTN4-207ENST00000495553 PCP4P48539 62 aa4.76□□□□□ -1.65
ACTN4-207ENST00000495553 H7BZZ5 65 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms