RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 CNFNQ9BYD5 112 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 UBL5Q9BZL1 73 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 BPESC1Q9GZL8 116 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 LINC00846Q9NV44 126 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 ABCA1O95477 2261 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 DNAH7Q8WXX0 4024 aa0.68□□□□□ -2.3
NCL-210ENST00000494618 KMT2DO14686 5537 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 IGIPA6NJ69 53 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 D6R8Y8 96 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 H0YGX0 51 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 CHKB-CPT1BH3BT56 60 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 RPL38P63173 70 aaKnown RBP0.67□□□□□ -2.3
NCL-210ENST00000494618 SPATA8Q6RVD6 105 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 MUSTN1Q8IVN3 82 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 DMAC1Q96GE9 116 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 SMR3AQ99954 134 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 NDUFA4L2Q9NRX3 87 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 PSENENQ9NZ42 101 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 PLAC8Q9NZF1 115 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 MRPL36Q9P0J6 103 aaKnown RBP0.67□□□□□ -2.3
NCL-210ENST00000494618 CSMD3Q7Z407 3707 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 LYSTQ99698 3801 aa0.67□□□□□ -2.3
NCL-210ENST00000494618 TRAV12-3A0A0B4J271 114 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 M0R135 149 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 HMGN4O00479 90 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 NREPQ16612 68 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 C10orf128Q5T292 105 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 LINC01590Q5TEZ4 76 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 DEFB124Q8NES8 71 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 SPTSSBQ8NFR3 76 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 COX7B2Q8TF08 81 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 PROK2Q9HC23 129 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 LINC01558Q9Y6Z2 57 aa0.66□□□□□ -2.3
NCL-210ENST00000494618 SRRM2Q9UQ35 2752 aaKnown RBP0.66□□□□□ -2.3
NCL-210ENST00000494618 FAT3Q8TDW7 4589 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 A0A087WVE0 104 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 TRAV21A0A0B4J279 112 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 H0Y9P7 68 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 I3L3M4 83 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 M0R3E3 92 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 MGPP08493 103 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 FXYD4P59646 89 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 COX17Q14061 63 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 FXYD3Q14802 87 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 SFTA2Q6UW10 78 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 Q6ZQY7 126 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 ARHGAP5-AS1Q96IT6 56 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 LINC00208Q96KT6 92 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 PRR15LQ9BU68 103 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 SMIM2Q9BVW6 85 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 KCNQ1DNQ9H478 68 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 R4GMQ9 66 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 MUC12Q9UKN1 5478 aa0.65□□□□□ -2.31
NCL-210ENST00000494618 CLPSL1A2RUU4 121 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 NUPR2A6NF83 97 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 CPSF4LA6NMK7 179 aaKnown RBP0.64□□□□□ -2.31
NCL-210ENST00000494618 C10orf142B7Z368 130 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 LOC730098B7Z3J9 87 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 M0R1W7 72 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 UQCR11O14957 56 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 SPINK4O60575 86 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 MRPL33O75394 65 aaKnown RBP0.64□□□□□ -2.31
NCL-210ENST00000494618 SPINT3P49223 89 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 CCL18P55774 89 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 SPAG11BQ08648 103 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 LELP1Q5T871 98 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 SPAG11AQ6PDA7 123 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 ENHOQ6UWT2 76 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 RPS27LQ71UM5 84 aaKnown RBP0.64□□□□□ -2.31
NCL-210ENST00000494618 SPRR4Q96PI1 79 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 USH2AO75445 5202 aa0.64□□□□□ -2.31
NCL-210ENST00000494618 DYNC1H1Q14204 4646 aaKnown RBP0.64□□□□□ -2.31
NCL-210ENST00000494618 MYCBP2O75592 4640 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 PLECQ15149 4684 aaKnown RBP0.63□□□□□ -2.31
NCL-210ENST00000494618 DNAH9Q9NYC9 4486 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 DEFB131BA0A096LNP1 70 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 ETDCA0A1B0GVM5 59 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 NDUFA4O00483 81 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 NDUFA1O15239 70 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 NDUFA3O95167 84 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 KRTAP2-3P0C7H8 128 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 CCL3L1P16619 93 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 ZNF137PP52743 207 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 TFF3Q07654 80 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 WFDC9Q8NEX5 89 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 KRTAP2-4Q9BYR9 128 aa0.63□□□□□ -2.31
NCL-210ENST00000494618 DSTQ03001 7570 aaKnown RBP0.63□□□□□ -2.31
NCL-210ENST00000494618 LRP1BQ9NZR2 4599 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 HSPG2P98160 4391 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 ANK3Q12955 4377 aaKnown RBP0.62□□□□□ -2.31
NCL-210ENST00000494618 K7EIL1 84 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 IAPPP10997 89 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 CSAG1Q6PB30 78 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 LINC00308Q8TCZ7 52 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 GAFA1Q96PS6 74 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 TIMM8BQ9Y5J9 83 aaPredicted RBP0.62□□□□□ -2.31
NCL-210ENST00000494618 PKHD1L1Q86WI1 4243 aa0.62□□□□□ -2.31
NCL-210ENST00000494618 LRP2P98164 4655 aa0.61□□□□□ -2.31
NCL-210ENST00000494618 MDN1Q9NU22 5596 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms