RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 BAALC-AS2P0C853 105 aa6.4□□□□□ -1.38
HSPG2-212ENST00000493940 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
HSPG2-212ENST00000493940 VPS25Q9BRG1 176 aa6.39□□□□□ -1.39
HSPG2-212ENST00000493940 TRBV20-1A0A075B6N2 111 aa6.38□□□□□ -1.39
HSPG2-212ENST00000493940 IGHV6-1A0A0B4J1U7 121 aa6.38□□□□□ -1.39
HSPG2-212ENST00000493940 KRTAP9-7A8MTY7 169 aa6.38□□□□□ -1.39
HSPG2-212ENST00000493940 RBM3P98179 157 aaKnown RBP6.38□□□□□ -1.39
HSPG2-212ENST00000493940 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
HSPG2-212ENST00000493940 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
HSPG2-212ENST00000493940 SPCS1Q9Y6A9 102 aa6.36□□□□□ -1.39
HSPG2-212ENST00000493940 HRES1P13985 223 aa6.35□□□□□ -1.39
HSPG2-212ENST00000493940 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
HSPG2-212ENST00000493940 MPLKIPQ8TAP9 179 aa6.34□□□□□ -1.39
HSPG2-212ENST00000493940 DSCR8Q96T75 97 aa6.34□□□□□ -1.39
HSPG2-212ENST00000493940 Q6ZQT0 140 aa6.33□□□□□ -1.4
HSPG2-212ENST00000493940 C9JAW5 83 aa6.32□□□□□ -1.4
HSPG2-212ENST00000493940 K7EP34 96 aa6.31□□□□□ -1.4
HSPG2-212ENST00000493940 GTF2H5Q6ZYL4 71 aa6.3□□□□□ -1.4
HSPG2-212ENST00000493940 USH2AO75445 5202 aa6.29□□□□□ -1.4
HSPG2-212ENST00000493940 C8orf87E5RJ46 101 aa6.28□□□□□ -1.4
HSPG2-212ENST00000493940 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
HSPG2-212ENST00000493940 H3BT86 120 aa6.27□□□□□ -1.41
HSPG2-212ENST00000493940 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
HSPG2-212ENST00000493940 C14orf132Q9NPU4 83 aa6.26□□□□□ -1.41
HSPG2-212ENST00000493940 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
HSPG2-212ENST00000493940 IGKV3D-7A0A0C4DH55 119 aa6.25□□□□□ -1.41
HSPG2-212ENST00000493940 MT2AP02795 61 aa6.25□□□□□ -1.41
HSPG2-212ENST00000493940 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
HSPG2-212ENST00000493940 J3KT08 172 aa6.24□□□□□ -1.41
HSPG2-212ENST00000493940 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
HSPG2-212ENST00000493940 ZCCHC13Q8WW36 166 aaKnown RBP6.24□□□□□ -1.41
HSPG2-212ENST00000493940 A0A1B0GV90 55 aa6.23□□□□□ -1.41
HSPG2-212ENST00000493940 C8orf17Q9NRJ1 99 aa6.23□□□□□ -1.41
HSPG2-212ENST00000493940 FAM236DA0A1B0GTK5 79 aa6.22□□□□□ -1.41
HSPG2-212ENST00000493940 MT1FP04733 61 aa6.22□□□□□ -1.41
HSPG2-212ENST00000493940 FAM236CP0DP71 79 aa6.22□□□□□ -1.41
HSPG2-212ENST00000493940 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
HSPG2-212ENST00000493940 A8MWP4 228 aa6.21□□□□□ -1.42
HSPG2-212ENST00000493940 SPINK7P58062 85 aa6.21□□□□□ -1.42
HSPG2-212ENST00000493940 SMCPP49901 116 aaPredicted RBP6.2□□□□□ -1.42
HSPG2-212ENST00000493940 F8W1H4 67 aa6.19□□□□□ -1.42
HSPG2-212ENST00000493940 RBM12B-AS1Q9P1G2 102 aa6.19□□□□□ -1.42
HSPG2-212ENST00000493940 A0A1B0GW54 56 aa6.18□□□□□ -1.42
HSPG2-212ENST00000493940 NDUFB1O75438 58 aa6.18□□□□□ -1.42
HSPG2-212ENST00000493940 C21orf62-AS1Q17RA5 79 aa6.18□□□□□ -1.42
HSPG2-212ENST00000493940 LCE2BO14633 110 aa6.17□□□□□ -1.42
HSPG2-212ENST00000493940 PDE6GP18545 87 aa6.17□□□□□ -1.42
HSPG2-212ENST00000493940 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
HSPG2-212ENST00000493940 MMP24-AS1A0A0U1RRL7 71 aa6.16□□□□□ -1.42
HSPG2-212ENST00000493940 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
HSPG2-212ENST00000493940 FCGBPQ9Y6R7 5405 aaPredicted RBP6.15□□□□□ -1.42
HSPG2-212ENST00000493940 NREPQ16612 68 aa6.15□□□□□ -1.42
HSPG2-212ENST00000493940 Q6ZVQ6 151 aa6.15□□□□□ -1.42
HSPG2-212ENST00000493940 ETDBQ3ZM63 59 aa6.13□□□□□ -1.43
HSPG2-212ENST00000493940 K7EQZ3 153 aa6.12□□□□□ -1.43
HSPG2-212ENST00000493940 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
HSPG2-212ENST00000493940 WFDC13Q8IUB5 93 aa6.1□□□□□ -1.43
HSPG2-212ENST00000493940 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
HSPG2-212ENST00000493940 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
HSPG2-212ENST00000493940 TMEM254Q8TBM7 123 aa6.09□□□□□ -1.43
HSPG2-212ENST00000493940 Q5W150 140 aa6.08□□□□□ -1.44
HSPG2-212ENST00000493940 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
HSPG2-212ENST00000493940 Q8N9L7 120 aa6.07□□□□□ -1.44
HSPG2-212ENST00000493940 BPY2O14599 106 aa6.03□□□□□ -1.44
HSPG2-212ENST00000493940 NDUFS5O43920 106 aa6.02□□□□□ -1.45
HSPG2-212ENST00000493940 LINC00846Q9NV44 126 aa5.99□□□□□ -1.45
HSPG2-212ENST00000493940 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
HSPG2-212ENST00000493940 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
HSPG2-212ENST00000493940 FAM240AA0A1B0GVK7 77 aa5.97□□□□□ -1.45
HSPG2-212ENST00000493940 J3QR89 54 aa5.97□□□□□ -1.45
HSPG2-212ENST00000493940 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
HSPG2-212ENST00000493940 ACYP1P07311 99 aa5.97□□□□□ -1.45
HSPG2-212ENST00000493940 H1FX-AS1Q4G0G2 97 aa5.97□□□□□ -1.45
HSPG2-212ENST00000493940 HCG22E2RYF7 251 aa5.96□□□□□ -1.46
HSPG2-212ENST00000493940 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
HSPG2-212ENST00000493940 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
HSPG2-212ENST00000493940 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
HSPG2-212ENST00000493940 C4orf26Q17RF5 130 aa5.92□□□□□ -1.46
HSPG2-212ENST00000493940 C7orf65Q6ZTY9 151 aa5.92□□□□□ -1.46
HSPG2-212ENST00000493940 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
HSPG2-212ENST00000493940 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.46
HSPG2-212ENST00000493940 K7ERU9 68 aa5.89□□□□□ -1.47
HSPG2-212ENST00000493940 CXCL6P80162 114 aa5.86□□□□□ -1.47
HSPG2-212ENST00000493940 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
HSPG2-212ENST00000493940 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
HSPG2-212ENST00000493940 LINC00643Q86TS7 51 aa5.84□□□□□ -1.47
HSPG2-212ENST00000493940 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
HSPG2-212ENST00000493940 HIST1H4AP62805 103 aaKnown RBP5.77□□□□□ -1.49
HSPG2-212ENST00000493940 C1orf64Q8NEQ6 169 aa5.77□□□□□ -1.49
HSPG2-212ENST00000493940 LCA10Q71F78 164 aa5.75□□□□□ -1.49
HSPG2-212ENST00000493940 A0A087WVE0 104 aa5.74□□□□□ -1.49
HSPG2-212ENST00000493940 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
HSPG2-212ENST00000493940 S4R3F8 94 aa5.73□□□□□ -1.49
HSPG2-212ENST00000493940 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
HSPG2-212ENST00000493940 MT-ATP8P03928 68 aa5.71□□□□□ -1.5
HSPG2-212ENST00000493940 MT1BP07438 61 aa5.71□□□□□ -1.5
HSPG2-212ENST00000493940 CYP4F30PQ9H0H9 118 aa5.71□□□□□ -1.5
HSPG2-212ENST00000493940 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
HSPG2-212ENST00000493940 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
HSPG2-212ENST00000493940 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms