RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
TM4SF1-204ENST00000493348 C9orf92A6NGG3 77 aa4.54□□□□□ -1.68
TM4SF1-204ENST00000493348 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
TM4SF1-204ENST00000493348 A0A1W2PNM2 257 aa4.53□□□□□ -1.68
TM4SF1-204ENST00000493348 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
TM4SF1-204ENST00000493348 SIGMAR1Q99720 223 aa4.53□□□□□ -1.68
TM4SF1-204ENST00000493348 SEC61BP60468 96 aaKnown RBP4.52□□□□□ -1.69
TM4SF1-204ENST00000493348 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
TM4SF1-204ENST00000493348 MTURNQ8N3F0 131 aa4.51□□□□□ -1.69
TM4SF1-204ENST00000493348 C14orf132Q9NPU4 83 aa4.51□□□□□ -1.69
TM4SF1-204ENST00000493348 LOC110117498A0A087WWA1 95 aa4.5□□□□□ -1.69
TM4SF1-204ENST00000493348 A0A1B0GW54 56 aa4.5□□□□□ -1.69
TM4SF1-204ENST00000493348 K7EP34 96 aa4.5□□□□□ -1.69
TM4SF1-204ENST00000493348 IGKV4-1P06312 121 aa4.5□□□□□ -1.69
TM4SF1-204ENST00000493348 Q6ZQT0 140 aa4.49□□□□□ -1.69
TM4SF1-204ENST00000493348 A0A0U1RQV1 116 aa4.48□□□□□ -1.69
TM4SF1-204ENST00000493348 J3KT08 172 aa4.47□□□□□ -1.69
TM4SF1-204ENST00000493348 NDUFB1O75438 58 aa4.47□□□□□ -1.69
TM4SF1-204ENST00000493348 NREPQ16612 68 aa4.47□□□□□ -1.69
TM4SF1-204ENST00000493348 OBSCN-AS1Q96MR7 158 aa4.47□□□□□ -1.69
TM4SF1-204ENST00000493348 DEFB116Q30KQ4 102 aa4.46□□□□□ -1.7
TM4SF1-204ENST00000493348 Q96NJ1 140 aa4.46□□□□□ -1.7
TM4SF1-204ENST00000493348 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 IGHV6-1A0A0B4J1U7 121 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 F8W1H4 67 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 LINC00313P59037 77 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 LINC00472Q9H8W2 130 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
TM4SF1-204ENST00000493348 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
TM4SF1-204ENST00000493348 DSCR10P59022 87 aa4.42□□□□□ -1.7
TM4SF1-204ENST00000493348 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
TM4SF1-204ENST00000493348 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
TM4SF1-204ENST00000493348 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
TM4SF1-204ENST00000493348 PCOTHQ58A44 107 aa4.41□□□□□ -1.7
TM4SF1-204ENST00000493348 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
TM4SF1-204ENST00000493348 Q75L30 129 aa4.4□□□□□ -1.71
TM4SF1-204ENST00000493348 UBL5Q9BZL1 73 aa4.4□□□□□ -1.71
TM4SF1-204ENST00000493348 PRO0461Q9UI25 63 aa4.4□□□□□ -1.71
TM4SF1-204ENST00000493348 BPY2O14599 106 aa4.39□□□□□ -1.71
TM4SF1-204ENST00000493348 A8MWP4 228 aa4.38□□□□□ -1.71
TM4SF1-204ENST00000493348 ETDBQ3ZM63 59 aa4.38□□□□□ -1.71
TM4SF1-204ENST00000493348 MUC2Q02817 5179 aa4.35□□□□□ -1.71
TM4SF1-204ENST00000493348 A8MUU9 505 aa4.35□□□□□ -1.71
TM4SF1-204ENST00000493348 Q6ZVQ6 151 aa4.35□□□□□ -1.71
TM4SF1-204ENST00000493348 C20orf166-AS1Q96NR2 134 aa4.35□□□□□ -1.71
TM4SF1-204ENST00000493348 C8orf17Q9NRJ1 99 aa4.35□□□□□ -1.71
TM4SF1-204ENST00000493348 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
TM4SF1-204ENST00000493348 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
TM4SF1-204ENST00000493348 A0A1B0GV90 55 aa4.33□□□□□ -1.72
TM4SF1-204ENST00000493348 NDUFS5O43920 106 aa4.32□□□□□ -1.72
TM4SF1-204ENST00000493348 ACYP1P07311 99 aa4.32□□□□□ -1.72
TM4SF1-204ENST00000493348 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
TM4SF1-204ENST00000493348 LINC00846Q9NV44 126 aa4.32□□□□□ -1.72
TM4SF1-204ENST00000493348 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
TM4SF1-204ENST00000493348 K7EQZ3 153 aa4.31□□□□□ -1.72
TM4SF1-204ENST00000493348 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
TM4SF1-204ENST00000493348 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
TM4SF1-204ENST00000493348 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
TM4SF1-204ENST00000493348 J3QR89 54 aa4.29□□□□□ -1.72
TM4SF1-204ENST00000493348 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
TM4SF1-204ENST00000493348 MMP24-AS1A0A0U1RRL7 71 aa4.28□□□□□ -1.72
TM4SF1-204ENST00000493348 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
TM4SF1-204ENST00000493348 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
TM4SF1-204ENST00000493348 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
TM4SF1-204ENST00000493348 FAM240AA0A1B0GVK7 77 aa4.27□□□□□ -1.73
TM4SF1-204ENST00000493348 CXCL6P80162 114 aa4.27□□□□□ -1.73
TM4SF1-204ENST00000493348 Q8N9L7 120 aa4.27□□□□□ -1.73
TM4SF1-204ENST00000493348 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
TM4SF1-204ENST00000493348 Q8N9P0 234 aaPredicted RBP4.26□□□□□ -1.73
TM4SF1-204ENST00000493348 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
TM4SF1-204ENST00000493348 FAM236DA0A1B0GTK5 79 aa4.25□□□□□ -1.73
TM4SF1-204ENST00000493348 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
TM4SF1-204ENST00000493348 FAM236CP0DP71 79 aa4.25□□□□□ -1.73
TM4SF1-204ENST00000493348 ATP5EP2Q5VTU8 51 aa4.25□□□□□ -1.73
TM4SF1-204ENST00000493348 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
TM4SF1-204ENST00000493348 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
TM4SF1-204ENST00000493348 HIST1H4AP62805 103 aaKnown RBP4.22□□□□□ -1.73
TM4SF1-204ENST00000493348 M0R2T5 61 aa4.2□□□□□ -1.74
TM4SF1-204ENST00000493348 LINC00643Q86TS7 51 aa4.2□□□□□ -1.74
TM4SF1-204ENST00000493348 SPINK7P58062 85 aa4.19□□□□□ -1.74
TM4SF1-204ENST00000493348 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
TM4SF1-204ENST00000493348 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
TM4SF1-204ENST00000493348 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
TM4SF1-204ENST00000493348 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
TM4SF1-204ENST00000493348 K7ERU9 68 aa4.16□□□□□ -1.74
TM4SF1-204ENST00000493348 HRES1P13985 223 aa4.14□□□□□ -1.75
TM4SF1-204ENST00000493348 Q5W150 140 aa4.13□□□□□ -1.75
TM4SF1-204ENST00000493348 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
TM4SF1-204ENST00000493348 MT1HP80294 61 aa4.12□□□□□ -1.75
TM4SF1-204ENST00000493348 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
TM4SF1-204ENST00000493348 SCGB1A1P11684 91 aa4.11□□□□□ -1.75
TM4SF1-204ENST00000493348 A0A087WVE0 104 aa4.1□□□□□ -1.75
TM4SF1-204ENST00000493348 TRAV22A0A0B4J277 110 aa4.1□□□□□ -1.75
TM4SF1-204ENST00000493348 UQCRQO14949 82 aa4.1□□□□□ -1.75
TM4SF1-204ENST00000493348 ATOX1O00244 68 aa4.09□□□□□ -1.75
TM4SF1-204ENST00000493348 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
TM4SF1-204ENST00000493348 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
TM4SF1-204ENST00000493348 H0Y9P7 68 aa4.07□□□□□ -1.76
TM4SF1-204ENST00000493348 MP68P56378 58 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms