RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
SF3A3-208ENST00000489537 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
SF3A3-208ENST00000489537 A0A087WSZ3 146 aa3.86□□□□□ -1.79
SF3A3-208ENST00000489537 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
SF3A3-208ENST00000489537 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
SF3A3-208ENST00000489537 NDUFC1O43677 76 aa3.85□□□□□ -1.79
SF3A3-208ENST00000489537 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
SF3A3-208ENST00000489537 MYCBP2O75592 4640 aa3.84□□□□□ -1.79
SF3A3-208ENST00000489537 A0A087WVE0 104 aa3.84□□□□□ -1.79
SF3A3-208ENST00000489537 IGLV9-49A0A0B4J1Y8 123 aa3.84□□□□□ -1.79
SF3A3-208ENST00000489537 A8MWP4 228 aa3.84□□□□□ -1.79
SF3A3-208ENST00000489537 IGKV4-1P06312 121 aa3.84□□□□□ -1.79
SF3A3-208ENST00000489537 VPS13BQ7Z7G8 4022 aa3.83□□□□□ -1.8
SF3A3-208ENST00000489537 HCG22E2RYF7 251 aa3.83□□□□□ -1.8
SF3A3-208ENST00000489537 SPINK6Q6UWN8 80 aa3.83□□□□□ -1.8
SF3A3-208ENST00000489537 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
SF3A3-208ENST00000489537 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
SF3A3-208ENST00000489537 MOBPQ13875 183 aa3.82□□□□□ -1.8
SF3A3-208ENST00000489537 ASB16-AS1Q495Z4 193 aa3.82□□□□□ -1.8
SF3A3-208ENST00000489537 Q5XG85 94 aa3.82□□□□□ -1.8
SF3A3-208ENST00000489537 LINC00472Q9H8W2 130 aa3.82□□□□□ -1.8
SF3A3-208ENST00000489537 H3BPC8 53 aa3.81□□□□□ -1.8
SF3A3-208ENST00000489537 DSCR10P59022 87 aa3.81□□□□□ -1.8
SF3A3-208ENST00000489537 C5orf47Q569G3 176 aa3.81□□□□□ -1.8
SF3A3-208ENST00000489537 PRR15Q8IV56 129 aa3.81□□□□□ -1.8
SF3A3-208ENST00000489537 FAM30AQ9NZY2 134 aa3.81□□□□□ -1.8
SF3A3-208ENST00000489537 CCDC179H3BU77 68 aa3.8□□□□□ -1.8
SF3A3-208ENST00000489537 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
SF3A3-208ENST00000489537 TMEM258P61165 79 aa3.8□□□□□ -1.8
SF3A3-208ENST00000489537 KLKP1Q107X0 134 aa3.8□□□□□ -1.8
SF3A3-208ENST00000489537 SPAG11AQ6PDA7 123 aa3.8□□□□□ -1.8
SF3A3-208ENST00000489537 TP53AIP1Q9HCN2 124 aa3.8□□□□□ -1.8
SF3A3-208ENST00000489537 MP68P56378 58 aa3.79□□□□□ -1.8
SF3A3-208ENST00000489537 RPS29P62273 56 aaKnown RBP3.79□□□□□ -1.8
SF3A3-208ENST00000489537 C8orf87E5RJ46 101 aa3.78□□□□□ -1.8
SF3A3-208ENST00000489537 K7EQZ3 153 aa3.78□□□□□ -1.8
SF3A3-208ENST00000489537 SPINK1P00995 79 aa3.78□□□□□ -1.8
SF3A3-208ENST00000489537 CASC2Q6XLA1 102 aa3.78□□□□□ -1.8
SF3A3-208ENST00000489537 TMEM254Q8TBM7 123 aa3.77□□□□□ -1.81
SF3A3-208ENST00000489537 OCR1Q9BZK8 76 aa3.77□□□□□ -1.81
SF3A3-208ENST00000489537 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
SF3A3-208ENST00000489537 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
SF3A3-208ENST00000489537 C20orf197Q8N268 126 aa3.76□□□□□ -1.81
SF3A3-208ENST00000489537 Q8N9L7 120 aa3.76□□□□□ -1.81
SF3A3-208ENST00000489537 FAT3Q8TDW7 4589 aa3.75□□□□□ -1.81
SF3A3-208ENST00000489537 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
SF3A3-208ENST00000489537 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
SF3A3-208ENST00000489537 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
SF3A3-208ENST00000489537 KRTAP29-1A8MX34 341 aaPredicted RBP3.74□□□□□ -1.81
SF3A3-208ENST00000489537 RPS28P62857 69 aaKnown RBP3.74□□□□□ -1.81
SF3A3-208ENST00000489537 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
SF3A3-208ENST00000489537 A0A0G2JQZ4 141 aa3.73□□□□□ -1.81
SF3A3-208ENST00000489537 HRCT1Q6UXD1 115 aa3.73□□□□□ -1.81
SF3A3-208ENST00000489537 Q96NJ1 140 aa3.73□□□□□ -1.81
SF3A3-208ENST00000489537 C8orf17Q9NRJ1 99 aa3.73□□□□□ -1.81
SF3A3-208ENST00000489537 A0A0U1RQV1 116 aa3.72□□□□□ -1.81
SF3A3-208ENST00000489537 DEFB116Q30KQ4 102 aa3.72□□□□□ -1.81
SF3A3-208ENST00000489537 WFDC13Q8IUB5 93 aa3.72□□□□□ -1.81
SF3A3-208ENST00000489537 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
SF3A3-208ENST00000489537 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
SF3A3-208ENST00000489537 SRRM2Q9UQ35 2752 aaKnown RBP3.71□□□□□ -1.82
SF3A3-208ENST00000489537 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
SF3A3-208ENST00000489537 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
SF3A3-208ENST00000489537 MMP24-AS1A0A0U1RRL7 71 aa3.71□□□□□ -1.82
SF3A3-208ENST00000489537 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
SF3A3-208ENST00000489537 LINC00304Q8N9R0 145 aa3.71□□□□□ -1.82
SF3A3-208ENST00000489537 MRPL34Q9BQ48 92 aaKnown RBP3.71□□□□□ -1.82
SF3A3-208ENST00000489537 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
SF3A3-208ENST00000489537 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
SF3A3-208ENST00000489537 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
SF3A3-208ENST00000489537 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
SF3A3-208ENST00000489537 A0A087X002 238 aa3.69□□□□□ -1.82
SF3A3-208ENST00000489537 H7BZZ5 65 aa3.69□□□□□ -1.82
SF3A3-208ENST00000489537 LINC00313P59037 77 aa3.69□□□□□ -1.82
SF3A3-208ENST00000489537 H0Y9P7 68 aa3.68□□□□□ -1.82
SF3A3-208ENST00000489537 C1orf195Q5TG92 126 aa3.68□□□□□ -1.82
SF3A3-208ENST00000489537 DMBT1Q9UGM3 2413 aaPredicted RBP3.68□□□□□ -1.82
SF3A3-208ENST00000489537 LOC101927531A0A1B0GV80 90 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 NDUFS5O43920 106 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 Q5VSD8 79 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
SF3A3-208ENST00000489537 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
SF3A3-208ENST00000489537 LINC00208Q96KT6 92 aa3.66□□□□□ -1.82
SF3A3-208ENST00000489537 KRTAP10-4P60372 401 aaPredicted RBP3.65□□□□□ -1.83
SF3A3-208ENST00000489537 C1orf64Q8NEQ6 169 aa3.65□□□□□ -1.83
SF3A3-208ENST00000489537 PRR26Q8N8Z3 221 aa3.64□□□□□ -1.83
SF3A3-208ENST00000489537 Q8N9P0 234 aaPredicted RBP3.64□□□□□ -1.83
SF3A3-208ENST00000489537 CYP4F30PQ9H0H9 118 aa3.64□□□□□ -1.83
SF3A3-208ENST00000489537 TNXBP22105 4242 aa3.64□□□□□ -1.83
SF3A3-208ENST00000489537 FP248Q71RG6 208 aaPredicted RBP3.62□□□□□ -1.83
SF3A3-208ENST00000489537 IGLV7-46A0A075B6I9 117 aa3.6□□□□□ -1.83
SF3A3-208ENST00000489537 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
SF3A3-208ENST00000489537 IGKV2-30P06310 120 aa3.6□□□□□ -1.83
SF3A3-208ENST00000489537 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
SF3A3-208ENST00000489537 V9GYY9 64 aa3.59□□□□□ -1.83
SF3A3-208ENST00000489537 OXTP01178 125 aa3.58□□□□□ -1.84
SF3A3-208ENST00000489537 LRP2P98164 4655 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms