RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
ITGB1-215ENST00000488494 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
ITGB1-215ENST00000488494 TSTD3H0UI37 97 aa9.06□□□□□ -0.96
ITGB1-215ENST00000488494 C21orf62-AS1Q17RA5 79 aa9.06□□□□□ -0.96
ITGB1-215ENST00000488494 C8orf87E5RJ46 101 aa9.05□□□□□ -0.96
ITGB1-215ENST00000488494 BATFQ16520 125 aa9.05□□□□□ -0.96
ITGB1-215ENST00000488494 Q6ZQT0 140 aa9.05□□□□□ -0.96
ITGB1-215ENST00000488494 JMJD7-PLA2G4BH0Y9G9 81 aa9.04□□□□□ -0.96
ITGB1-215ENST00000488494 J3KT08 172 aa9.04□□□□□ -0.96
ITGB1-215ENST00000488494 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
ITGB1-215ENST00000488494 LOC110117498A0A087WWA1 95 aa9.03□□□□□ -0.96
ITGB1-215ENST00000488494 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
ITGB1-215ENST00000488494 CRCT1Q9UGL9 99 aa8.98□□□□□ -0.97
ITGB1-215ENST00000488494 PDE6GP18545 87 aa8.97□□□□□ -0.97
ITGB1-215ENST00000488494 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
ITGB1-215ENST00000488494 A0A1B0GW54 56 aa8.96□□□□□ -0.98
ITGB1-215ENST00000488494 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
ITGB1-215ENST00000488494 NDUFB1O75438 58 aa8.95□□□□□ -0.98
ITGB1-215ENST00000488494 HRES1P13985 223 aa8.95□□□□□ -0.98
ITGB1-215ENST00000488494 LOC105371267A0A1B0GV96 52 aa8.94□□□□□ -0.98
ITGB1-215ENST00000488494 A8MWP4 228 aa8.94□□□□□ -0.98
ITGB1-215ENST00000488494 ZCCHC13Q8WW36 166 aaKnown RBP8.93□□□□□ -0.98
ITGB1-215ENST00000488494 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
ITGB1-215ENST00000488494 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
ITGB1-215ENST00000488494 IGKV3D-7A0A0C4DH55 119 aa8.91□□□□□ -0.98
ITGB1-215ENST00000488494 C9orf118A6NHY6 69 aa8.91□□□□□ -0.98
ITGB1-215ENST00000488494 MTURNQ8N3F0 131 aa8.91□□□□□ -0.98
ITGB1-215ENST00000488494 C8orf17Q9NRJ1 99 aa8.91□□□□□ -0.98
ITGB1-215ENST00000488494 A0A1W2PPM0 123 aa8.89□□□□□ -0.99
ITGB1-215ENST00000488494 TAX1BP3O14907 124 aa8.89□□□□□ -0.99
ITGB1-215ENST00000488494 Q8N9P0 234 aaPredicted RBP8.89□□□□□ -0.99
ITGB1-215ENST00000488494 H3BT86 120 aa8.88□□□□□ -0.99
ITGB1-215ENST00000488494 NREPQ16612 68 aa8.87□□□□□ -0.99
ITGB1-215ENST00000488494 Q6ZVQ6 151 aa8.84□□□□□ -0.99
ITGB1-215ENST00000488494 PRR15Q8IV56 129 aa8.84□□□□□ -0.99
ITGB1-215ENST00000488494 KRTAP9-8Q9BYQ0 159 aa8.84□□□□□ -0.99
ITGB1-215ENST00000488494 SPINK7P58062 85 aa8.83□□□□□ -1
ITGB1-215ENST00000488494 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
ITGB1-215ENST00000488494 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
ITGB1-215ENST00000488494 K7EQZ3 153 aa8.78□□□□□ -1
ITGB1-215ENST00000488494 SPCS1Q9Y6A9 102 aa8.78□□□□□ -1
ITGB1-215ENST00000488494 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
ITGB1-215ENST00000488494 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
ITGB1-215ENST00000488494 MT2AP02795 61 aa8.75□□□□□ -1.01
ITGB1-215ENST00000488494 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
ITGB1-215ENST00000488494 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
ITGB1-215ENST00000488494 BPY2O14599 106 aa8.73□□□□□ -1.01
ITGB1-215ENST00000488494 USH2AO75445 5202 aa8.71□□□□□ -1.01
ITGB1-215ENST00000488494 NDUFS5O43920 106 aa8.7□□□□□ -1.02
ITGB1-215ENST00000488494 MT1FP04733 61 aa8.69□□□□□ -1.02
ITGB1-215ENST00000488494 COL5A1-AS1Q5SY13 56 aa8.68□□□□□ -1.02
ITGB1-215ENST00000488494 Q8N9L7 120 aa8.67□□□□□ -1.02
ITGB1-215ENST00000488494 SSPOA2VEC9 5147 aa8.64□□□□□ -1.03
ITGB1-215ENST00000488494 K7EP34 96 aa8.63□□□□□ -1.03
ITGB1-215ENST00000488494 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
ITGB1-215ENST00000488494 PRO0461Q9UI25 63 aa8.63□□□□□ -1.03
ITGB1-215ENST00000488494 CASC2Q6XLA1 102 aa8.61□□□□□ -1.03
ITGB1-215ENST00000488494 IGKV2D-30A0A075B6S6 120 aa8.58□□□□□ -1.04
ITGB1-215ENST00000488494 IGKV2-30P06310 120 aa8.58□□□□□ -1.04
ITGB1-215ENST00000488494 LINC00846Q9NV44 126 aa8.58□□□□□ -1.04
ITGB1-215ENST00000488494 Q5W150 140 aa8.57□□□□□ -1.04
ITGB1-215ENST00000488494 UBL5Q9BZL1 73 aa8.57□□□□□ -1.04
ITGB1-215ENST00000488494 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
ITGB1-215ENST00000488494 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
ITGB1-215ENST00000488494 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
ITGB1-215ENST00000488494 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
ITGB1-215ENST00000488494 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
ITGB1-215ENST00000488494 CXCL6P80162 114 aa8.49□□□□□ -1.05
ITGB1-215ENST00000488494 PCP4L1A6NKN8 68 aa8.47□□□□□ -1.05
ITGB1-215ENST00000488494 F8W1H4 67 aa8.42□□□□□ -1.06
ITGB1-215ENST00000488494 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
ITGB1-215ENST00000488494 ETDBQ3ZM63 59 aa8.42□□□□□ -1.06
ITGB1-215ENST00000488494 FCGBPQ9Y6R7 5405 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-215ENST00000488494 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
ITGB1-215ENST00000488494 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-215ENST00000488494 TP53AIP1Q9HCN2 124 aa8.32□□□□□ -1.08
ITGB1-215ENST00000488494 C5orf47Q569G3 176 aa8.27□□□□□ -1.09
ITGB1-215ENST00000488494 KRTAP3-1Q9BYR8 98 aa8.27□□□□□ -1.09
ITGB1-215ENST00000488494 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
ITGB1-215ENST00000488494 C1orf64Q8NEQ6 169 aa8.25□□□□□ -1.09
ITGB1-215ENST00000488494 S4R3F8 94 aa8.25□□□□□ -1.09
ITGB1-215ENST00000488494 KRTAP19-6Q3LI70 58 aa8.23□□□□□ -1.09
ITGB1-215ENST00000488494 ACYP1P07311 99 aa8.21□□□□□ -1.1
ITGB1-215ENST00000488494 FAM240AA0A1B0GVK7 77 aa8.2□□□□□ -1.1
ITGB1-215ENST00000488494 MACF1Q9UPN3 7388 aaKnown RBP8.19□□□□□ -1.1
ITGB1-215ENST00000488494 LCA10Q71F78 164 aa8.19□□□□□ -1.1
ITGB1-215ENST00000488494 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
ITGB1-215ENST00000488494 TRAV22A0A0B4J277 110 aa8.17□□□□□ -1.1
ITGB1-215ENST00000488494 FAM236AA0A1B0GUQ0 79 aa8.16□□□□□ -1.1
ITGB1-215ENST00000488494 FAM236BA0A1B0GV22 79 aa8.16□□□□□ -1.1
ITGB1-215ENST00000488494 CYP4F30PQ9H0H9 118 aa8.16□□□□□ -1.1
ITGB1-215ENST00000488494 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
ITGB1-215ENST00000488494 HIST1H4AP62805 103 aaKnown RBP8.14□□□□□ -1.11
ITGB1-215ENST00000488494 LOC101927531A0A1B0GV80 90 aa8.12□□□□□ -1.11
ITGB1-215ENST00000488494 SYNE2Q8WXH0 6885 aaKnown RBP8.08□□□□□ -1.12
ITGB1-215ENST00000488494 UQCRQO14949 82 aa8.06□□□□□ -1.12
ITGB1-215ENST00000488494 A0A087WVE0 104 aa8.05□□□□□ -1.12
ITGB1-215ENST00000488494 H0Y9P7 68 aa8.05□□□□□ -1.12
ITGB1-215ENST00000488494 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
ITGB1-215ENST00000488494 ATOX1O00244 68 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms