RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 C1orf137Q5JT78 98 aa2.29□□□□□ -2.04
SRRM1-215ENST00000488317 PKIGQ9Y2B9 76 aa2.29□□□□□ -2.04
SRRM1-215ENST00000488317 HTN3P15516 51 aa2.28□□□□□ -2.04
SRRM1-215ENST00000488317 WFDC10BQ8IUB3 73 aa2.28□□□□□ -2.04
SRRM1-215ENST00000488317 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
SRRM1-215ENST00000488317 Q9BRP9 147 aa2.28□□□□□ -2.04
SRRM1-215ENST00000488317 VWFP04275 2813 aa2.28□□□□□ -2.04
SRRM1-215ENST00000488317 ITPR2Q14571 2701 aa2.28□□□□□ -2.04
SRRM1-215ENST00000488317 TEP1Q99973 2627 aaKnown RBP2.28□□□□□ -2.04
SRRM1-215ENST00000488317 ZFHX3Q15911 3703 aa2.28□□□□□ -2.05
SRRM1-215ENST00000488317 SVEP1Q4LDE5 3571 aa2.27□□□□□ -2.05
SRRM1-215ENST00000488317 PDZD2O15018 2839 aa2.27□□□□□ -2.05
SRRM1-215ENST00000488317 DEFB4AO15263 64 aa2.27□□□□□ -2.05
SRRM1-215ENST00000488317 ATRQ13535 2644 aa2.27□□□□□ -2.05
SRRM1-215ENST00000488317 AKAP9Q99996 3911 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 VPS13CQ709C8 3753 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 TRAV22A0A0B4J277 110 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 K7EQZ3 153 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 UBE2BP63146 152 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 DEFB105AQ8NG35 78 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 LIMD2Q9BT23 127 aa2.26□□□□□ -2.05
SRRM1-215ENST00000488317 HELZ2Q9BYK8 2649 aaKnown RBP2.26□□□□□ -2.05
SRRM1-215ENST00000488317 F8P00451 2351 aa2.25□□□□□ -2.05
SRRM1-215ENST00000488317 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
SRRM1-215ENST00000488317 TENM1Q9UKZ4 2725 aa2.24□□□□□ -2.05
SRRM1-215ENST00000488317 PRB1P04280 392 aa2.24□□□□□ -2.05
SRRM1-215ENST00000488317 SPRR1BP22528 89 aa2.24□□□□□ -2.05
SRRM1-215ENST00000488317 LINC00208Q96KT6 92 aa2.24□□□□□ -2.05
SRRM1-215ENST00000488317 FASNP49327 2511 aaKnown RBP2.24□□□□□ -2.05
SRRM1-215ENST00000488317 TENM3Q9P273 2699 aa2.24□□□□□ -2.05
SRRM1-215ENST00000488317 DEFB131BA0A096LNP1 70 aa2.23□□□□□ -2.05
SRRM1-215ENST00000488317 H0Y9P7 68 aa2.23□□□□□ -2.05
SRRM1-215ENST00000488317 Q5VV11 94 aa2.23□□□□□ -2.05
SRRM1-215ENST00000488317 CASC2Q6XLA1 102 aa2.23□□□□□ -2.05
SRRM1-215ENST00000488317 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
SRRM1-215ENST00000488317 PKD1L1Q8TDX9 2849 aa2.22□□□□□ -2.05
SRRM1-215ENST00000488317 LOC101927531A0A1B0GV80 90 aa2.22□□□□□ -2.05
SRRM1-215ENST00000488317 A8MUN3 132 aa2.22□□□□□ -2.05
SRRM1-215ENST00000488317 CNBPP62633 177 aaKnown RBP2.22□□□□□ -2.05
SRRM1-215ENST00000488317 C9orf163Q8N9P6 203 aa2.22□□□□□ -2.05
SRRM1-215ENST00000488317 TP53AIP1Q9HCN2 124 aa2.22□□□□□ -2.05
SRRM1-215ENST00000488317 A0A087WSZ3 146 aa2.21□□□□□ -2.06
SRRM1-215ENST00000488317 RPL37AP61513 92 aaKnown RBP2.21□□□□□ -2.06
SRRM1-215ENST00000488317 ATP11AUNQ6ZP68 121 aa2.21□□□□□ -2.06
SRRM1-215ENST00000488317 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
SRRM1-215ENST00000488317 WFDC13Q8IUB5 93 aa2.21□□□□□ -2.06
SRRM1-215ENST00000488317 BAHCC1Q9P281 2608 aa2.21□□□□□ -2.06
SRRM1-215ENST00000488317 MMP24-AS1A0A0U1RRL7 71 aa2.2□□□□□ -2.06
SRRM1-215ENST00000488317 CHKB-CPT1BH3BT56 60 aa2.2□□□□□ -2.06
SRRM1-215ENST00000488317 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
SRRM1-215ENST00000488317 LINC00472Q9H8W2 130 aa2.2□□□□□ -2.06
SRRM1-215ENST00000488317 CSMD2Q7Z408 3487 aa2.2□□□□□ -2.06
SRRM1-215ENST00000488317 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
SRRM1-215ENST00000488317 COA5Q86WW8 74 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 PRR15LQ9BU68 103 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 CDC42SE1Q9NRR8 79 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 PLAC8Q9NZF1 115 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 PSORS1C2Q9UIG4 136 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 TENM2Q9NT68 2774 aa2.19□□□□□ -2.06
SRRM1-215ENST00000488317 FLNBO75369 2602 aaKnown RBP2.19□□□□□ -2.06
SRRM1-215ENST00000488317 ANK3Q12955 4377 aaKnown RBP2.18□□□□□ -2.06
SRRM1-215ENST00000488317 MAST4O15021 2626 aa2.18□□□□□ -2.06
SRRM1-215ENST00000488317 A0A096LNI7 61 aa2.18□□□□□ -2.06
SRRM1-215ENST00000488317 J3QKU1 62 aa2.18□□□□□ -2.06
SRRM1-215ENST00000488317 PRLHP81277 87 aa2.18□□□□□ -2.06
SRRM1-215ENST00000488317 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
SRRM1-215ENST00000488317 NBEAL1Q6ZS30 2694 aa2.17□□□□□ -2.06
SRRM1-215ENST00000488317 A6NN06 94 aa2.17□□□□□ -2.06
SRRM1-215ENST00000488317 C7orf65Q6ZTY9 151 aa2.17□□□□□ -2.06
SRRM1-215ENST00000488317 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
SRRM1-215ENST00000488317 NOTCH1P46531 2555 aa2.16□□□□□ -2.06
SRRM1-215ENST00000488317 STAB1Q9NY15 2570 aa2.16□□□□□ -2.06
SRRM1-215ENST00000488317 OTOGQ6ZRI0 2925 aa2.16□□□□□ -2.06
SRRM1-215ENST00000488317 ZNF469Q96JG9 3925 aaPredicted RBP2.16□□□□□ -2.06
SRRM1-215ENST00000488317 KRTAP13-1Q8IUC0 172 aa2.16□□□□□ -2.06
SRRM1-215ENST00000488317 SMR3AQ99954 134 aa2.16□□□□□ -2.06
SRRM1-215ENST00000488317 HECTD1Q9ULT8 2610 aa2.16□□□□□ -2.06
SRRM1-215ENST00000488317 NBPF19A0A087WUL8 3843 aa2.15□□□□□ -2.06
SRRM1-215ENST00000488317 LCA10Q71F78 164 aa2.15□□□□□ -2.07
SRRM1-215ENST00000488317 Q96NJ1 140 aa2.15□□□□□ -2.07
SRRM1-215ENST00000488317 STAB2Q8WWQ8 2551 aa2.15□□□□□ -2.07
SRRM1-215ENST00000488317 A0A0G2JQZ4 141 aa2.14□□□□□ -2.07
SRRM1-215ENST00000488317 SPTSSBQ8NFR3 76 aa2.14□□□□□ -2.07
SRRM1-215ENST00000488317 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
SRRM1-215ENST00000488317 COL6A5A8TX70 2615 aa2.13□□□□□ -2.07
SRRM1-215ENST00000488317 PCOTHQ58A44 107 aa2.13□□□□□ -2.07
SRRM1-215ENST00000488317 ACYP2P14621 99 aa2.12□□□□□ -2.07
SRRM1-215ENST00000488317 SPAG11AQ6PDA7 123 aa2.12□□□□□ -2.07
SRRM1-215ENST00000488317 SRRM2Q9UQ35 2752 aaKnown RBP2.12□□□□□ -2.07
SRRM1-215ENST00000488317 CUBNO60494 3623 aa2.12□□□□□ -2.07
SRRM1-215ENST00000488317 KRTAP10-1P60331 282 aa2.11□□□□□ -2.07
SRRM1-215ENST00000488317 UBE2DNLQ8IWF7 75 aa2.11□□□□□ -2.07
SRRM1-215ENST00000488317 SPACA4Q8TDM5 124 aa2.11□□□□□ -2.07
SRRM1-215ENST00000488317 DMAC1Q96GE9 116 aa2.11□□□□□ -2.07
SRRM1-215ENST00000488317 SPINK7P58062 85 aa2.1□□□□□ -2.07
SRRM1-215ENST00000488317 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
SRRM1-215ENST00000488317 Q6ZRN7 208 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-215ENST00000488317 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.07
SRRM1-215ENST00000488317 APLNQ9ULZ1 77 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms