RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 VPS13BQ7Z7G8 4022 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DNAH7Q8WXX0 4024 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 LTN1O94822 1766 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 RGPD2P0DJD1 1756 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 LAMA1P25391 3075 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 FREM3P0C091 2139 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PI4KAP42356 2102 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ZGRF1Q86YA3 2104 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 NUP210LQ5VU65 1888 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 NUP210Q8TEM1 1887 aaPredicted RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SETD2Q9BYW2 2564 aaPredicted RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DOCK4Q8N1I0 1966 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 FAM236DA0A1B0GTK5 79 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 GNG14A0A1W2PPG7 69 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 RIIAD1A6NNX1 92 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 C5orf58C9J3I9 102 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 H0Y9P7 68 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 K7ERJ3 54 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 M0R129 80 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 M0R2Z0 102 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DEFB4AO15263 64 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 GNG7O60262 68 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PFDN1O60925 122 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DNAL4O96015 105 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 APOA2P02652 100 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 APOC3P02656 99 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 STATHP02808 62 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 MGPP08493 103 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 COX6CP09669 75 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 FAM236CP0DP71 79 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 CKS2P33552 79 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 FAUP35544 74 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DEFA1P59665 94 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DEFA3P59666 94 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 CKS1BP61024 79 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 LSM3P62310 102 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 RPL38P63173 70 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PLGLAQ15195 96 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ATXN8Q156A1 80 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ADIRFQ15847 76 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DEFB135Q30KP9 77 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DEFB133Q30KQ1 61 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 VMA21Q3ZAQ7 101 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SPATA45Q537H7 98 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 S100A7L2Q5SY68 101 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 CASC2Q6XLA1 102 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 GTF2H5Q6ZYL4 71 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 CTAGE3PQ8IX95 158 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SPTSSAQ969W0 71 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 AP1S3Q96PC3 154 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DSCR8Q96T75 97 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SMIM7Q9BQ49 75 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 VPS25Q9BRG1 176 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 VAMP8Q9BV40 100 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 UBL5Q9BZL1 73 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 WFDC10AQ9H1F0 79 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 Q9H521 79 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 NOP10Q9NPE3 64 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 C14orf132Q9NPU4 83 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ORMDL1Q9P0S3 153 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 GNG13Q9P2W3 67 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SS18L2Q9UHA2 77 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SPCS1Q9Y6A9 102 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SZT2Q5T011 3432 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SIP14410 1827 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PARP14Q460N5 1801 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SPEF2Q9C093 1822 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 TRRAPQ9Y4A5 3859 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 DOPEY2Q9Y3R5 2298 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 ANKRD36A6QL64 1941 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 MYH7BA7E2Y1 1941 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 MYH2Q9UKX2 1941 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 MYH13Q9UKX3 1938 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 FAM186AA6NE01 2351 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PDZD2O15018 2839 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 LYSTQ99698 3801 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PRKDCP78527 4128 aaKnown RBP-0.11□□□□□ -2.43
SMC4-219ENST00000487747 KNTC1P50748 2209 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 SPAG17Q6Q759 2223 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 VPS13CQ709C8 3753 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 PPLO60437 1756 aa-0.11□□□□□ -2.43
SMC4-219ENST00000487747 AKAP6Q13023 2319 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 PDE4DIPQ5VU43 2346 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 KNL1Q8NG31 2342 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 FER1L6Q2WGJ9 1857 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 CDK5RAP2Q96SN8 1893 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 FAM208BQ5VWN6 2430 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 DNAH14Q0VDD8 3507 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 FASNP49327 2511 aaKnown RBP-0.12□□□□□ -2.43
SMC4-219ENST00000487747 ZFYVE26Q68DK2 2539 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 MYH9P35579 1960 aaKnown RBP-0.12□□□□□ -2.43
SMC4-219ENST00000487747 COL6A5A8TX70 2615 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 UNC80Q8N2C7 3258 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 AKAP9Q99996 3911 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 PKDREJQ9NTG1 2253 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 CNOT1A5YKK6 2376 aaKnown RBP-0.12□□□□□ -2.43
SMC4-219ENST00000487747 TPRP12270 2363 aaKnown RBP-0.12□□□□□ -2.43
SMC4-219ENST00000487747 RIF1Q5UIP0 2472 aaKnown RBP-0.12□□□□□ -2.43
SMC4-219ENST00000487747 BTAF1O14981 1849 aa-0.12□□□□□ -2.43
SMC4-219ENST00000487747 PATJQ8NI35 1801 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms