RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 BAALC-AS2P0C853 105 aa2.11□□□□□ -2.07
PTCD3-216ENST00000487043 RPL28P46779 137 aaKnown RBP2.11□□□□□ -2.07
PTCD3-216ENST00000487043 Q6JHZ5 121 aa2.11□□□□□ -2.07
PTCD3-216ENST00000487043 SCXQ7RTU7 201 aa2.11□□□□□ -2.07
PTCD3-216ENST00000487043 C22orf24Q9Y442 160 aa2.11□□□□□ -2.07
PTCD3-216ENST00000487043 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 TRBV10-3A0A0K0K1G6 114 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 A0A1W2PNN7 141 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 hADV29S1A0JD25 119 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 NCR3O14931 201 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 HIST1H4AP62805 103 aaKnown RBP2.1□□□□□ -2.07
PTCD3-216ENST00000487043 C1orf195Q5TG92 126 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 ATP5EP2Q5VTU8 51 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 SMIM11BQ8TCY0 68 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 SPACA4Q8TDM5 124 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 KCNQ1DNQ9H478 68 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
PTCD3-216ENST00000487043 KMT2CQ8NEZ4 4911 aaKnown RBP2.09□□□□□ -2.07
PTCD3-216ENST00000487043 KMT2AQ03164 3969 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 RYR2Q92736 4967 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 PKD1P98161 4303 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 A0A1B0GU33 70 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 JMJD7-PLA2G4BH0Y9G9 81 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 DNAL4O96015 105 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 FUSP35637 526 aaKnown RBP eCLIP2.09□□□□□ -2.07
PTCD3-216ENST00000487043 CLEC2BQ92478 149 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 LAMTOR3Q9UHA4 124 aa2.09□□□□□ -2.07
PTCD3-216ENST00000487043 DNAH6Q9C0G6 4158 aa2.09□□□□□ -2.08
PTCD3-216ENST00000487043 FAT2Q9NYQ8 4349 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 TRBV7-6A0A0J9YX20 115 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 NDUFC1O43677 76 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 ZNF73O43830 326 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-216ENST00000487043 SPRR1AP35321 89 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 ATP5EP56381 51 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-216ENST00000487043 Q6ZSA8 131 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 PHF5AQ7RTV0 110 aaKnown RBP2.08□□□□□ -2.08
PTCD3-216ENST00000487043 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 HIGD2AQ9BW72 106 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 PLAC8Q9NZF1 115 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
PTCD3-216ENST00000487043 DNAH5Q8TE73 4624 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 COX7BP24311 80 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
PTCD3-216ENST00000487043 UBE2BP63146 152 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 LINC00575Q6W349 94 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 OBSCN-AS1Q96MR7 158 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 RYR3Q15413 4870 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
PTCD3-216ENST00000487043 DNAH8Q96JB1 4490 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 DYNC1H1Q14204 4646 aaKnown RBP2.06□□□□□ -2.08
PTCD3-216ENST00000487043 TRAV7A0A075B6U4 112 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 ETDCA0A1B0GVM5 59 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 TMEM256-PLSCR3K7ERE1 68 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 CCKP06307 115 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 Q6ZRX8 168 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 SMCR5Q8TEV8 140 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 UBL5Q9BZL1 73 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 ORMDL1Q9P0S3 153 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 LRP1BQ9NZR2 4599 aa2.06□□□□□ -2.08
PTCD3-216ENST00000487043 FAM236DA0A1B0GTK5 79 aa2.05□□□□□ -2.08
PTCD3-216ENST00000487043 FAM236CP0DP71 79 aa2.05□□□□□ -2.08
PTCD3-216ENST00000487043 PDE6GP18545 87 aa2.05□□□□□ -2.08
PTCD3-216ENST00000487043 FAM229BQ4G0N7 80 aa2.05□□□□□ -2.08
PTCD3-216ENST00000487043 Q5XG85 94 aa2.05□□□□□ -2.08
PTCD3-216ENST00000487043 HRCT1Q6UXD1 115 aa2.05□□□□□ -2.08
PTCD3-216ENST00000487043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.05□□□□□ -2.08
PTCD3-216ENST00000487043 IGKV3D-7A0A0C4DH55 119 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 ERC2-IT1O76042 136 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 P0C880 135 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 PRLHP81277 87 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 Q6ZQY7 126 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 DSCR8Q96T75 97 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 Q9BRP9 147 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 LINC00846Q9NV44 126 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 PSORS1C2Q9UIG4 136 aa2.04□□□□□ -2.08
PTCD3-216ENST00000487043 FRAS1Q86XX4 4008 aa2.03□□□□□ -2.08
PTCD3-216ENST00000487043 IGLV5-48A0A075B6I7 105 aa2.03□□□□□ -2.08
PTCD3-216ENST00000487043 A0A1W2PNM2 257 aa2.03□□□□□ -2.08
PTCD3-216ENST00000487043 KLKP1Q107X0 134 aa2.03□□□□□ -2.08
PTCD3-216ENST00000487043 C1orf137Q5JT78 98 aa2.03□□□□□ -2.08
PTCD3-216ENST00000487043 C14orf132Q9NPU4 83 aa2.03□□□□□ -2.08
PTCD3-216ENST00000487043 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
PTCD3-216ENST00000487043 IGKV4-1P06312 121 aa2.02□□□□□ -2.09
PTCD3-216ENST00000487043 SPRR1BP22528 89 aa2.02□□□□□ -2.09
PTCD3-216ENST00000487043 HAMPP81172 84 aa2.02□□□□□ -2.09
PTCD3-216ENST00000487043 RBM3P98179 157 aaKnown RBP2.02□□□□□ -2.09
PTCD3-216ENST00000487043 C20orf197Q8N268 126 aa2.02□□□□□ -2.09
PTCD3-216ENST00000487043 SRRM2Q9UQ35 2752 aaKnown RBP2.02□□□□□ -2.09
PTCD3-216ENST00000487043 APOBP04114 4563 aaKnown RBP2.01□□□□□ -2.09
PTCD3-216ENST00000487043 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
PTCD3-216ENST00000487043 H7BZZ5 65 aa2.01□□□□□ -2.09
PTCD3-216ENST00000487043 SMR3BP02814 79 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-216ENST00000487043 DEFB105AQ8NG35 78 aa2.01□□□□□ -2.09
PTCD3-216ENST00000487043 FAT1Q14517 4588 aa2□□□□□ -2.09
PTCD3-216ENST00000487043 A0A087WVE0 104 aa2□□□□□ -2.09
PTCD3-216ENST00000487043 KRTAP10-10P60014 251 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms