RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 A0A1W2PNM2 257 aa5.55□□□□□ -1.52
TMEM39A-208ENST00000486159 IGFL1Q6UW32 110 aa5.54□□□□□ -1.52
TMEM39A-208ENST00000486159 ANAPC13Q9BS18 74 aa5.54□□□□□ -1.52
TMEM39A-208ENST00000486159 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
TMEM39A-208ENST00000486159 FAM236AA0A1B0GUQ0 79 aa5.52□□□□□ -1.53
TMEM39A-208ENST00000486159 FAM236BA0A1B0GV22 79 aa5.52□□□□□ -1.53
TMEM39A-208ENST00000486159 ATOX1O00244 68 aa5.52□□□□□ -1.53
TMEM39A-208ENST00000486159 PRR4Q16378 134 aa5.52□□□□□ -1.53
TMEM39A-208ENST00000486159 BPY2O14599 106 aa5.51□□□□□ -1.53
TMEM39A-208ENST00000486159 ANAPC11Q9NYG5 84 aa5.51□□□□□ -1.53
TMEM39A-208ENST00000486159 A0A087X002 238 aa5.5□□□□□ -1.53
TMEM39A-208ENST00000486159 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
TMEM39A-208ENST00000486159 SMIM20Q8N5G0 67 aa5.48□□□□□ -1.53
TMEM39A-208ENST00000486159 C9orf153Q5TBE3 101 aa5.47□□□□□ -1.53
TMEM39A-208ENST00000486159 FAM229BQ4G0N7 80 aa5.46□□□□□ -1.54
TMEM39A-208ENST00000486159 SSBP3-AS1Q7Z2R9 100 aa5.46□□□□□ -1.54
TMEM39A-208ENST00000486159 SS18L2Q9UHA2 77 aa5.46□□□□□ -1.54
TMEM39A-208ENST00000486159 A0A087WSZ3 146 aa5.45□□□□□ -1.54
TMEM39A-208ENST00000486159 A0A087WVE0 104 aa5.45□□□□□ -1.54
TMEM39A-208ENST00000486159 J3KT08 172 aa5.45□□□□□ -1.54
TMEM39A-208ENST00000486159 CD164Q04900 197 aa5.45□□□□□ -1.54
TMEM39A-208ENST00000486159 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
TMEM39A-208ENST00000486159 IGLV9-49A0A0B4J1Y8 123 aa5.44□□□□□ -1.54
TMEM39A-208ENST00000486159 UQCRQO14949 82 aa5.44□□□□□ -1.54
TMEM39A-208ENST00000486159 RETNLBQ9BQ08 111 aa5.44□□□□□ -1.54
TMEM39A-208ENST00000486159 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
TMEM39A-208ENST00000486159 IGKV4-1P06312 121 aa5.43□□□□□ -1.54
TMEM39A-208ENST00000486159 SERP2Q8N6R1 65 aa5.43□□□□□ -1.54
TMEM39A-208ENST00000486159 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
TMEM39A-208ENST00000486159 COX7CP15954 63 aa5.42□□□□□ -1.54
TMEM39A-208ENST00000486159 MOBPQ13875 183 aa5.42□□□□□ -1.54
TMEM39A-208ENST00000486159 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
TMEM39A-208ENST00000486159 A0A0G2JQZ4 141 aa5.41□□□□□ -1.54
TMEM39A-208ENST00000486159 DSCR10P59022 87 aa5.41□□□□□ -1.54
TMEM39A-208ENST00000486159 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
TMEM39A-208ENST00000486159 LINC00472Q9H8W2 130 aa5.41□□□□□ -1.54
TMEM39A-208ENST00000486159 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
TMEM39A-208ENST00000486159 A0A0U1RQV1 116 aa5.4□□□□□ -1.54
TMEM39A-208ENST00000486159 A8MWP4 228 aa5.38□□□□□ -1.55
TMEM39A-208ENST00000486159 NDUFB1O75438 58 aa5.38□□□□□ -1.55
TMEM39A-208ENST00000486159 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
TMEM39A-208ENST00000486159 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
TMEM39A-208ENST00000486159 ASB16-AS1Q495Z4 193 aa5.37□□□□□ -1.55
TMEM39A-208ENST00000486159 Q5XG85 94 aa5.37□□□□□ -1.55
TMEM39A-208ENST00000486159 HCG22E2RYF7 251 aa5.36□□□□□ -1.55
TMEM39A-208ENST00000486159 CCDC179H3BU77 68 aa5.36□□□□□ -1.55
TMEM39A-208ENST00000486159 K7EQZ3 153 aa5.36□□□□□ -1.55
TMEM39A-208ENST00000486159 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
TMEM39A-208ENST00000486159 Q8N9L7 120 aa5.36□□□□□ -1.55
TMEM39A-208ENST00000486159 LINC00304Q8N9R0 145 aa5.35□□□□□ -1.55
TMEM39A-208ENST00000486159 Q96NJ1 140 aa5.33□□□□□ -1.56
TMEM39A-208ENST00000486159 DEFB116Q30KQ4 102 aa5.32□□□□□ -1.56
TMEM39A-208ENST00000486159 HRCT1Q6UXD1 115 aa5.32□□□□□ -1.56
TMEM39A-208ENST00000486159 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
TMEM39A-208ENST00000486159 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
TMEM39A-208ENST00000486159 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
TMEM39A-208ENST00000486159 A0A1B0GVX0 72 aa5.3□□□□□ -1.56
TMEM39A-208ENST00000486159 SPINK1P00995 79 aa5.3□□□□□ -1.56
TMEM39A-208ENST00000486159 RPS29P62273 56 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-208ENST00000486159 SPAG11AQ6PDA7 123 aa5.3□□□□□ -1.56
TMEM39A-208ENST00000486159 CASC2Q6XLA1 102 aa5.3□□□□□ -1.56
TMEM39A-208ENST00000486159 NDUFC1O43677 76 aa5.29□□□□□ -1.56
TMEM39A-208ENST00000486159 KLKP1Q107X0 134 aa5.29□□□□□ -1.56
TMEM39A-208ENST00000486159 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
TMEM39A-208ENST00000486159 C5orf47Q569G3 176 aa5.28□□□□□ -1.56
TMEM39A-208ENST00000486159 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
TMEM39A-208ENST00000486159 MMP24-AS1A0A0U1RRL7 71 aa5.27□□□□□ -1.57
TMEM39A-208ENST00000486159 C8orf87E5RJ46 101 aa5.27□□□□□ -1.57
TMEM39A-208ENST00000486159 C20orf197Q8N268 126 aa5.27□□□□□ -1.57
TMEM39A-208ENST00000486159 hDV103S1A0JD37 113 aa5.26□□□□□ -1.57
TMEM39A-208ENST00000486159 TMEM258P61165 79 aa5.26□□□□□ -1.57
TMEM39A-208ENST00000486159 WFDC13Q8IUB5 93 aa5.26□□□□□ -1.57
TMEM39A-208ENST00000486159 TP53AIP1Q9HCN2 124 aa5.26□□□□□ -1.57
TMEM39A-208ENST00000486159 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
TMEM39A-208ENST00000486159 H3BPC8 53 aa5.25□□□□□ -1.57
TMEM39A-208ENST00000486159 TMEM254Q8TBM7 123 aa5.25□□□□□ -1.57
TMEM39A-208ENST00000486159 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
TMEM39A-208ENST00000486159 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
TMEM39A-208ENST00000486159 MP68P56378 58 aa5.23□□□□□ -1.57
TMEM39A-208ENST00000486159 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
TMEM39A-208ENST00000486159 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
TMEM39A-208ENST00000486159 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
TMEM39A-208ENST00000486159 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
TMEM39A-208ENST00000486159 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
TMEM39A-208ENST00000486159 H7BZZ5 65 aa5.19□□□□□ -1.58
TMEM39A-208ENST00000486159 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
TMEM39A-208ENST00000486159 LINC00313P59037 77 aa5.18□□□□□ -1.58
TMEM39A-208ENST00000486159 FP248Q71RG6 208 aaPredicted RBP5.18□□□□□ -1.58
TMEM39A-208ENST00000486159 SNURFQ9Y675 71 aa5.18□□□□□ -1.58
TMEM39A-208ENST00000486159 TRAV22A0A0B4J277 110 aa5.17□□□□□ -1.58
TMEM39A-208ENST00000486159 ZCCHC13Q8WW36 166 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-208ENST00000486159 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
TMEM39A-208ENST00000486159 CYSTM1Q9H1C7 97 aa5.17□□□□□ -1.58
TMEM39A-208ENST00000486159 H0Y9P7 68 aa5.16□□□□□ -1.58
TMEM39A-208ENST00000486159 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
TMEM39A-208ENST00000486159 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
TMEM39A-208ENST00000486159 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
TMEM39A-208ENST00000486159 NDUFS5O43920 106 aa5.14□□□□□ -1.59
TMEM39A-208ENST00000486159 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
TMEM39A-208ENST00000486159 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms