RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LINC00313P59037 77 aa9.52□□□□□ -0.89
PRPF40A-209ENST00000486100 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
PRPF40A-209ENST00000486100 F8W1H4 67 aa9.51□□□□□ -0.89
PRPF40A-209ENST00000486100 LINC00472Q9H8W2 130 aa9.51□□□□□ -0.89
PRPF40A-209ENST00000486100 A0A1B0GV90 55 aa9.5□□□□□ -0.89
PRPF40A-209ENST00000486100 JMJD7-PLA2G4BH0Y9G9 81 aa9.49□□□□□ -0.89
PRPF40A-209ENST00000486100 RBM3P98179 157 aaKnown RBP9.48□□□□□ -0.89
PRPF40A-209ENST00000486100 C21orf62-AS1Q17RA5 79 aa9.48□□□□□ -0.89
PRPF40A-209ENST00000486100 DEFB116Q30KQ4 102 aa9.48□□□□□ -0.89
PRPF40A-209ENST00000486100 PRO0461Q9UI25 63 aa9.48□□□□□ -0.89
PRPF40A-209ENST00000486100 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
PRPF40A-209ENST00000486100 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
PRPF40A-209ENST00000486100 NOTCH2NLQ7Z3S9 236 aa9.44□□□□□ -0.9
PRPF40A-209ENST00000486100 VPS25Q9BRG1 176 aa9.44□□□□□ -0.9
PRPF40A-209ENST00000486100 PDE6GP18545 87 aa9.43□□□□□ -0.9
PRPF40A-209ENST00000486100 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
PRPF40A-209ENST00000486100 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
PRPF40A-209ENST00000486100 FSIP2Q5CZC0 6907 aa9.42□□□□□ -0.9
PRPF40A-209ENST00000486100 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
PRPF40A-209ENST00000486100 CRCT1Q9UGL9 99 aa9.41□□□□□ -0.9
PRPF40A-209ENST00000486100 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
PRPF40A-209ENST00000486100 A0A1B0GW54 56 aa9.36□□□□□ -0.91
PRPF40A-209ENST00000486100 C8orf87E5RJ46 101 aa9.36□□□□□ -0.91
PRPF40A-209ENST00000486100 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
PRPF40A-209ENST00000486100 J3KT08 172 aa9.34□□□□□ -0.91
PRPF40A-209ENST00000486100 Q6ZQT0 140 aa9.34□□□□□ -0.91
PRPF40A-209ENST00000486100 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
PRPF40A-209ENST00000486100 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
PRPF40A-209ENST00000486100 HRES1P13985 223 aa9.27□□□□□ -0.93
PRPF40A-209ENST00000486100 NDUFB1O75438 58 aa9.26□□□□□ -0.93
PRPF40A-209ENST00000486100 MPLKIPQ8TAP9 179 aa9.26□□□□□ -0.93
PRPF40A-209ENST00000486100 RBM12B-AS1Q9P1G2 102 aa9.26□□□□□ -0.93
PRPF40A-209ENST00000486100 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
PRPF40A-209ENST00000486100 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
PRPF40A-209ENST00000486100 KRTAP9-8Q9BYQ0 159 aa9.23□□□□□ -0.93
PRPF40A-209ENST00000486100 ZCCHC13Q8WW36 166 aaKnown RBP9.22□□□□□ -0.93
PRPF40A-209ENST00000486100 A8MWP4 228 aa9.21□□□□□ -0.94
PRPF40A-209ENST00000486100 Q8N9P0 234 aaPredicted RBP9.21□□□□□ -0.94
PRPF40A-209ENST00000486100 J3QR89 54 aa9.2□□□□□ -0.94
PRPF40A-209ENST00000486100 ACYP1P07311 99 aa9.19□□□□□ -0.94
PRPF40A-209ENST00000486100 FAM240AA0A1B0GVK7 77 aa9.18□□□□□ -0.94
PRPF40A-209ENST00000486100 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
PRPF40A-209ENST00000486100 IGKV3D-7A0A0C4DH55 119 aa9.17□□□□□ -0.94
PRPF40A-209ENST00000486100 NREPQ16612 68 aa9.16□□□□□ -0.94
PRPF40A-209ENST00000486100 SPINK7P58062 85 aa9.15□□□□□ -0.94
PRPF40A-209ENST00000486100 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
PRPF40A-209ENST00000486100 Q6ZVQ6 151 aa9.11□□□□□ -0.95
PRPF40A-209ENST00000486100 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
PRPF40A-209ENST00000486100 K7ERU9 68 aa9.09□□□□□ -0.95
PRPF40A-209ENST00000486100 MT2AP02795 61 aa9.07□□□□□ -0.96
PRPF40A-209ENST00000486100 LINC00846Q9NV44 126 aa9.07□□□□□ -0.96
PRPF40A-209ENST00000486100 USH2AO75445 5202 aa9.05□□□□□ -0.96
PRPF40A-209ENST00000486100 MMP24-AS1A0A0U1RRL7 71 aa9.04□□□□□ -0.96
PRPF40A-209ENST00000486100 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
PRPF40A-209ENST00000486100 MRPL34Q9BQ48 92 aaKnown RBP9.03□□□□□ -0.96
PRPF40A-209ENST00000486100 K7EQZ3 153 aa9□□□□□ -0.97
PRPF40A-209ENST00000486100 MT1FP04733 61 aa9□□□□□ -0.97
PRPF40A-209ENST00000486100 hDV103S1A0JD37 113 aa8.99□□□□□ -0.97
PRPF40A-209ENST00000486100 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
PRPF40A-209ENST00000486100 BPY2O14599 106 aa8.98□□□□□ -0.97
PRPF40A-209ENST00000486100 KRTAP10-10P60014 251 aa8.98□□□□□ -0.97
PRPF40A-209ENST00000486100 ATP5EP2Q5VTU8 51 aa8.98□□□□□ -0.97
PRPF40A-209ENST00000486100 SSPOA2VEC9 5147 aa8.96□□□□□ -0.97
PRPF40A-209ENST00000486100 CXCL6P80162 114 aa8.96□□□□□ -0.98
PRPF40A-209ENST00000486100 LINC00643Q86TS7 51 aa8.96□□□□□ -0.98
PRPF40A-209ENST00000486100 NDUFS5O43920 106 aa8.94□□□□□ -0.98
PRPF40A-209ENST00000486100 KRTAP9-3Q9BYQ3 159 aa8.94□□□□□ -0.98
PRPF40A-209ENST00000486100 LCE2BO14633 110 aa8.89□□□□□ -0.99
PRPF40A-209ENST00000486100 Q8N9L7 120 aa8.86□□□□□ -0.99
PRPF40A-209ENST00000486100 Q5W150 140 aa8.85□□□□□ -0.99
PRPF40A-209ENST00000486100 CASC2Q6XLA1 102 aa8.84□□□□□ -0.99
PRPF40A-209ENST00000486100 H1FX-AS1Q4G0G2 97 aa8.83□□□□□ -1
PRPF40A-209ENST00000486100 IGKV2D-30A0A075B6S6 120 aa8.82□□□□□ -1
PRPF40A-209ENST00000486100 IGKV2-30P06310 120 aa8.82□□□□□ -1
PRPF40A-209ENST00000486100 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
PRPF40A-209ENST00000486100 HCG22E2RYF7 251 aa8.8□□□□□ -1
PRPF40A-209ENST00000486100 IMUPQ9GZP8 106 aa8.79□□□□□ -1
PRPF40A-209ENST00000486100 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.76□□□□□ -1.01
PRPF40A-209ENST00000486100 FCGBPQ9Y6R7 5405 aaPredicted RBP8.76□□□□□ -1.01
PRPF40A-209ENST00000486100 KRTAP19-1Q8IUB9 90 aa8.75□□□□□ -1.01
PRPF40A-209ENST00000486100 HIST1H4AP62805 103 aaKnown RBP8.74□□□□□ -1.01
PRPF40A-209ENST00000486100 MT-ATP8P03928 68 aa8.69□□□□□ -1.02
PRPF40A-209ENST00000486100 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
PRPF40A-209ENST00000486100 KRTAP9-7A8MTY7 169 aa8.66□□□□□ -1.02
PRPF40A-209ENST00000486100 A0A087WVE0 104 aa8.62□□□□□ -1.03
PRPF40A-209ENST00000486100 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
PRPF40A-209ENST00000486100 KRTAP19-6Q3LI70 58 aa8.6□□□□□ -1.03
PRPF40A-209ENST00000486100 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
PRPF40A-209ENST00000486100 SCGB1A1P11684 91 aa8.53□□□□□ -1.04
PRPF40A-209ENST00000486100 SMIM20Q8N5G0 67 aa8.53□□□□□ -1.04
PRPF40A-209ENST00000486100 C1orf64Q8NEQ6 169 aa8.53□□□□□ -1.04
PRPF40A-209ENST00000486100 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.05
PRPF40A-209ENST00000486100 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.05
PRPF40A-209ENST00000486100 C5orf47Q569G3 176 aa8.52□□□□□ -1.05
PRPF40A-209ENST00000486100 UQCRQO14949 82 aa8.5□□□□□ -1.05
PRPF40A-209ENST00000486100 S4R3F8 94 aa8.49□□□□□ -1.05
PRPF40A-209ENST00000486100 ATOX1O00244 68 aa8.48□□□□□ -1.05
PRPF40A-209ENST00000486100 OCR1Q9BZK8 76 aa8.48□□□□□ -1.05
PRPF40A-209ENST00000486100 CSAG1Q6PB30 78 aa8.46□□□□□ -1.06
PRPF40A-209ENST00000486100 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms