RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 LOC107984156A0A0G2JMH3 177 aa1.51□□□□□ -2.17
SMARCC1-207ENST00000485833 CKS2P33552 79 aa1.51□□□□□ -2.17
SMARCC1-207ENST00000485833 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
SMARCC1-207ENST00000485833 Q5XG85 94 aa1.51□□□□□ -2.17
SMARCC1-207ENST00000485833 ARL17AQ8IVW1 177 aa1.51□□□□□ -2.17
SMARCC1-207ENST00000485833 MANBALQ9NQG1 85 aa1.51□□□□□ -2.17
SMARCC1-207ENST00000485833 TRAV7A0A075B6U4 112 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 C11orf86A6NJI1 115 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 H3BT86 120 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 ARPC5O15511 151 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 PPP1R17O96001 155 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 Q96NJ1 140 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 SCGB3A1Q96QR1 104 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 SPANXCQ9NY87 97 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 V9GYV3 84 aa1.5□□□□□ -2.17
SMARCC1-207ENST00000485833 SPRR1BP22528 89 aa1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 KRTAP19-8Q3LI54 63 aa1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 MRPL54Q6P161 138 aaKnown RBP1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 ALKAL2Q6UX46 152 aa1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 HIST3H2BBQ8N257 126 aa1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 OSTCQ9NRP0 149 aa1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 NAT8Q9UHE5 227 aa1.49□□□□□ -2.17
SMARCC1-207ENST00000485833 TRBV10-2A0A0K0K1G8 114 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 A0A1B0GX51 115 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 UMAD1C9J7I0 102 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 TCL1BO95988 128 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 TRGC2P03986 189 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 SMIM13P0DJ93 91 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 FXYD2P54710 66 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 LINC00158P58513 81 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 KRTAP8-1Q8IUC2 63 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 PRELID3AQ96N28 172 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 LAMTOR2Q9Y2Q5 125 aa1.48□□□□□ -2.17
SMARCC1-207ENST00000485833 Q5VV11 94 aa1.47□□□□□ -2.17
SMARCC1-207ENST00000485833 Q8N8P6 123 aa1.47□□□□□ -2.17
SMARCC1-207ENST00000485833 HIST1H2BLQ99880 126 aa1.47□□□□□ -2.17
SMARCC1-207ENST00000485833 CST9LQ9H4G1 147 aa1.47□□□□□ -2.17
SMARCC1-207ENST00000485833 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
SMARCC1-207ENST00000485833 SMIM27A0A1W2PRY6 76 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 J3KT08 172 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 TMEM256-PLSCR3K7ERE1 68 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 SEC11AP67812 179 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 COX17Q14061 63 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 DEFB105AQ8NG35 78 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 PRO1933Q9H354 126 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 PRO2289Q9P1D8 64 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 NAT8BQ9UHF3 227 aa1.46□□□□□ -2.18
SMARCC1-207ENST00000485833 TRAV23DV6A0A075B6W5 121 aa1.45□□□□□ -2.18
SMARCC1-207ENST00000485833 HMSDA8MTL9 139 aa1.45□□□□□ -2.18
SMARCC1-207ENST00000485833 IGLC3P0DOY3 106 aa1.45□□□□□ -2.18
SMARCC1-207ENST00000485833 MT4P47944 62 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 AKR1D1P51857 326 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 NDUFA5Q16718 116 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 SOSTDC1Q6X4U4 206 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 Q6ZQT0 140 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 SMIM7Q9BQ49 75 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 SPRR2GQ9BYE4 73 aa1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 NHP2Q9NX24 153 aaKnown RBP1.44□□□□□ -2.18
SMARCC1-207ENST00000485833 TRBV7-6A0A0J9YX20 115 aa1.43□□□□□ -2.18
SMARCC1-207ENST00000485833 H3BRM9 83 aa1.43□□□□□ -2.18
SMARCC1-207ENST00000485833 ZNF345Q14585 488 aa1.43□□□□□ -2.18
SMARCC1-207ENST00000485833 TRBV7-7A0A0K0K1E9 115 aa1.42□□□□□ -2.18
SMARCC1-207ENST00000485833 F8W036 122 aa1.42□□□□□ -2.18
SMARCC1-207ENST00000485833 NPC2P61916 151 aa1.42□□□□□ -2.18
SMARCC1-207ENST00000485833 MEIG1Q5JSS6 88 aa1.42□□□□□ -2.18
SMARCC1-207ENST00000485833 KANTRA0A1W2PQU2 76 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 J3QQQ9 107 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 HIST1H2BKO60814 126 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 HIST1H2BJP06899 126 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 NDUFA6P56556 154 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 TMEM258P61165 79 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 MT1XP80297 61 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 ADIRFQ15847 76 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 TMEM170BQ5T4T1 132 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 HSPB8Q9UJY1 196 aa1.41□□□□□ -2.18
SMARCC1-207ENST00000485833 IGLV5-48A0A075B6I7 105 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 TEX49A0A1B0GTD5 131 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 C9JAW5 83 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 HINT1P49773 126 aaPredicted RBP1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 ELOF1P60002 83 aaKnown RBP1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 LINC00299Q6ZSB3 139 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 S100ZQ8WXG8 99 aa1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 NXT2Q9NPJ8 142 aaKnown RBP1.4□□□□□ -2.19
SMARCC1-207ENST00000485833 LINC01546A6NGU7 62 aa1.39□□□□□ -2.19
SMARCC1-207ENST00000485833 TIMM17BO60830 172 aa1.39□□□□□ -2.19
SMARCC1-207ENST00000485833 DPM2O94777 84 aa1.39□□□□□ -2.19
SMARCC1-207ENST00000485833 FABP2P12104 132 aa1.39□□□□□ -2.19
SMARCC1-207ENST00000485833 SPINK7P58062 85 aa1.39□□□□□ -2.19
SMARCC1-207ENST00000485833 TCTE3Q8IZS6 198 aa1.39□□□□□ -2.19
SMARCC1-207ENST00000485833 H3BMG7 143 aa1.38□□□□□ -2.19
SMARCC1-207ENST00000485833 K7EMI3 77 aa1.38□□□□□ -2.19
SMARCC1-207ENST00000485833 K7ERJ3 54 aa1.38□□□□□ -2.19
SMARCC1-207ENST00000485833 S100A8P05109 93 aa1.38□□□□□ -2.19
SMARCC1-207ENST00000485833 BAALC-AS2P0C853 105 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms