RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 C9JAW5 83 aa6.65□□□□□ -1.34
HDAC1-209ENST00000484305 M0R2T5 61 aa6.65□□□□□ -1.34
HDAC1-209ENST00000484305 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-209ENST00000484305 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.35
HDAC1-209ENST00000484305 TSTD3H0UI37 97 aa6.63□□□□□ -1.35
HDAC1-209ENST00000484305 BATFQ16520 125 aa6.62□□□□□ -1.35
HDAC1-209ENST00000484305 Q6ZQT0 140 aa6.62□□□□□ -1.35
HDAC1-209ENST00000484305 LOC105371267A0A1B0GV96 52 aa6.61□□□□□ -1.35
HDAC1-209ENST00000484305 JMJD7-PLA2G4BH0Y9G9 81 aa6.61□□□□□ -1.35
HDAC1-209ENST00000484305 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
HDAC1-209ENST00000484305 LOC110117498A0A087WWA1 95 aa6.59□□□□□ -1.35
HDAC1-209ENST00000484305 C21orf62-AS1Q17RA5 79 aa6.59□□□□□ -1.35
HDAC1-209ENST00000484305 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
HDAC1-209ENST00000484305 KRTAP4-12Q9BQ66 201 aa6.58□□□□□ -1.36
HDAC1-209ENST00000484305 C14orf132Q9NPU4 83 aa6.58□□□□□ -1.36
HDAC1-209ENST00000484305 TRBV20-1A0A075B6N2 111 aa6.57□□□□□ -1.36
HDAC1-209ENST00000484305 C8orf87E5RJ46 101 aa6.57□□□□□ -1.36
HDAC1-209ENST00000484305 J3KT08 172 aa6.57□□□□□ -1.36
HDAC1-209ENST00000484305 PDE6GP18545 87 aa6.55□□□□□ -1.36
HDAC1-209ENST00000484305 A0A1B0GW54 56 aa6.54□□□□□ -1.36
HDAC1-209ENST00000484305 C9orf118A6NHY6 69 aa6.54□□□□□ -1.36
HDAC1-209ENST00000484305 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
HDAC1-209ENST00000484305 NDUFB1O75438 58 aa6.52□□□□□ -1.37
HDAC1-209ENST00000484305 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
HDAC1-209ENST00000484305 A0A1W2PPM0 123 aa6.51□□□□□ -1.37
HDAC1-209ENST00000484305 HRES1P13985 223 aa6.51□□□□□ -1.37
HDAC1-209ENST00000484305 A8MWP4 228 aa6.5□□□□□ -1.37
HDAC1-209ENST00000484305 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
HDAC1-209ENST00000484305 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
HDAC1-209ENST00000484305 MPLKIPQ8TAP9 179 aa6.49□□□□□ -1.37
HDAC1-209ENST00000484305 ZCCHC13Q8WW36 166 aaKnown RBP6.49□□□□□ -1.37
HDAC1-209ENST00000484305 C8orf17Q9NRJ1 99 aa6.49□□□□□ -1.37
HDAC1-209ENST00000484305 H3BT86 120 aa6.48□□□□□ -1.37
HDAC1-209ENST00000484305 NREPQ16612 68 aa6.48□□□□□ -1.37
HDAC1-209ENST00000484305 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
HDAC1-209ENST00000484305 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
HDAC1-209ENST00000484305 FAM236DA0A1B0GTK5 79 aa6.47□□□□□ -1.37
HDAC1-209ENST00000484305 FAM236CP0DP71 79 aa6.47□□□□□ -1.37
HDAC1-209ENST00000484305 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
HDAC1-209ENST00000484305 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
HDAC1-209ENST00000484305 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
HDAC1-209ENST00000484305 PRR15Q8IV56 129 aa6.45□□□□□ -1.38
HDAC1-209ENST00000484305 SPINK7P58062 85 aa6.43□□□□□ -1.38
HDAC1-209ENST00000484305 Q6ZVQ6 151 aa6.43□□□□□ -1.38
HDAC1-209ENST00000484305 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
HDAC1-209ENST00000484305 SPCS1Q9Y6A9 102 aa6.42□□□□□ -1.38
HDAC1-209ENST00000484305 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
HDAC1-209ENST00000484305 K7EQZ3 153 aa6.39□□□□□ -1.39
HDAC1-209ENST00000484305 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
HDAC1-209ENST00000484305 MRPL34Q9BQ48 92 aaKnown RBP6.37□□□□□ -1.39
HDAC1-209ENST00000484305 hDV103S1A0JD37 113 aa6.36□□□□□ -1.39
HDAC1-209ENST00000484305 COL5A1-AS1Q5SY13 56 aa6.36□□□□□ -1.39
HDAC1-209ENST00000484305 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
HDAC1-209ENST00000484305 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
HDAC1-209ENST00000484305 BPY2O14599 106 aa6.35□□□□□ -1.39
HDAC1-209ENST00000484305 MT2AP02795 61 aa6.34□□□□□ -1.39
HDAC1-209ENST00000484305 NDUFS5O43920 106 aa6.33□□□□□ -1.4
HDAC1-209ENST00000484305 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
HDAC1-209ENST00000484305 PRO0461Q9UI25 63 aa6.33□□□□□ -1.4
HDAC1-209ENST00000484305 Q8N9L7 120 aa6.32□□□□□ -1.4
HDAC1-209ENST00000484305 K7EP34 96 aa6.31□□□□□ -1.4
HDAC1-209ENST00000484305 H3BS24 57 aa6.29□□□□□ -1.4
HDAC1-209ENST00000484305 MT1FP04733 61 aa6.29□□□□□ -1.4
HDAC1-209ENST00000484305 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
HDAC1-209ENST00000484305 Q5W150 140 aa6.27□□□□□ -1.41
HDAC1-209ENST00000484305 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
HDAC1-209ENST00000484305 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
HDAC1-209ENST00000484305 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
HDAC1-209ENST00000484305 IGKV2D-30A0A075B6S6 120 aa6.24□□□□□ -1.41
HDAC1-209ENST00000484305 PCP4L1A6NKN8 68 aa6.24□□□□□ -1.41
HDAC1-209ENST00000484305 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
HDAC1-209ENST00000484305 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
HDAC1-209ENST00000484305 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
HDAC1-209ENST00000484305 GTF2H5Q6ZYL4 71 aa6.22□□□□□ -1.41
HDAC1-209ENST00000484305 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
HDAC1-209ENST00000484305 USH2AO75445 5202 aa6.21□□□□□ -1.42
HDAC1-209ENST00000484305 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
HDAC1-209ENST00000484305 F8W1H4 67 aa6.19□□□□□ -1.42
HDAC1-209ENST00000484305 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
HDAC1-209ENST00000484305 CXCL6P80162 114 aa6.18□□□□□ -1.42
HDAC1-209ENST00000484305 ETDBQ3ZM63 59 aa6.17□□□□□ -1.42
HDAC1-209ENST00000484305 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
HDAC1-209ENST00000484305 C4orf26Q17RF5 130 aa6.13□□□□□ -1.43
HDAC1-209ENST00000484305 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
HDAC1-209ENST00000484305 TP53AIP1Q9HCN2 124 aa6.07□□□□□ -1.44
HDAC1-209ENST00000484305 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
HDAC1-209ENST00000484305 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
HDAC1-209ENST00000484305 ACYP1P07311 99 aa6.02□□□□□ -1.45
HDAC1-209ENST00000484305 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
HDAC1-209ENST00000484305 FCGBPQ9Y6R7 5405 aaPredicted RBP6.01□□□□□ -1.45
HDAC1-209ENST00000484305 C5orf47Q569G3 176 aa6□□□□□ -1.45
HDAC1-209ENST00000484305 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
HDAC1-209ENST00000484305 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
HDAC1-209ENST00000484305 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
HDAC1-209ENST00000484305 S4R3F8 94 aa5.98□□□□□ -1.45
HDAC1-209ENST00000484305 CYP4F30PQ9H0H9 118 aa5.97□□□□□ -1.45
HDAC1-209ENST00000484305 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
HDAC1-209ENST00000484305 LCA10Q71F78 164 aa5.96□□□□□ -1.46
HDAC1-209ENST00000484305 TRAV22A0A0B4J277 110 aa5.95□□□□□ -1.46
HDAC1-209ENST00000484305 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms