RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.69□□□□□ -0.86
R3HDM1-215ENST00000483021 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
R3HDM1-215ENST00000483021 VPS25Q9BRG1 176 aa9.68□□□□□ -0.86
R3HDM1-215ENST00000483021 RBM3P98179 157 aaKnown RBP9.66□□□□□ -0.86
R3HDM1-215ENST00000483021 PYY3Q5JQD4 70 aa9.66□□□□□ -0.86
R3HDM1-215ENST00000483021 MTURNQ8N3F0 131 aa9.66□□□□□ -0.86
R3HDM1-215ENST00000483021 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
R3HDM1-215ENST00000483021 C21orf62-AS1Q17RA5 79 aa9.65□□□□□ -0.86
R3HDM1-215ENST00000483021 KRTAP9-7A8MTY7 169 aa9.64□□□□□ -0.87
R3HDM1-215ENST00000483021 MT1FP04733 61 aa9.64□□□□□ -0.87
R3HDM1-215ENST00000483021 J3KT08 172 aa9.62□□□□□ -0.87
R3HDM1-215ENST00000483021 SCGB1C2P0DMR2 95 aa9.61□□□□□ -0.87
R3HDM1-215ENST00000483021 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
R3HDM1-215ENST00000483021 UQCR10Q9UDW1 63 aa9.61□□□□□ -0.87
R3HDM1-215ENST00000483021 KRTAP10-10P60014 251 aa9.6□□□□□ -0.87
R3HDM1-215ENST00000483021 C9JAW5 83 aa9.58□□□□□ -0.88
R3HDM1-215ENST00000483021 KRTAP9-3Q9BYQ3 159 aa9.57□□□□□ -0.88
R3HDM1-215ENST00000483021 FCGBPQ9Y6R7 5405 aaPredicted RBP9.56□□□□□ -0.88
R3HDM1-215ENST00000483021 NDUFB1O75438 58 aa9.55□□□□□ -0.88
R3HDM1-215ENST00000483021 SPINK7P58062 85 aa9.55□□□□□ -0.88
R3HDM1-215ENST00000483021 BAALC-AS2P0C853 105 aa9.54□□□□□ -0.88
R3HDM1-215ENST00000483021 Q6ZQT0 140 aa9.54□□□□□ -0.88
R3HDM1-215ENST00000483021 Q8N9P0 234 aaPredicted RBP9.53□□□□□ -0.88
R3HDM1-215ENST00000483021 KRTAP19-1Q8IUB9 90 aa9.52□□□□□ -0.89
R3HDM1-215ENST00000483021 A0A1B0GW54 56 aa9.49□□□□□ -0.89
R3HDM1-215ENST00000483021 A8MWP4 228 aa9.47□□□□□ -0.89
R3HDM1-215ENST00000483021 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
R3HDM1-215ENST00000483021 LYRM7Q5U5X0 104 aa9.46□□□□□ -0.9
R3HDM1-215ENST00000483021 C8orf17Q9NRJ1 99 aa9.46□□□□□ -0.9
R3HDM1-215ENST00000483021 TMA7Q9Y2S6 64 aaKnown RBP9.46□□□□□ -0.9
R3HDM1-215ENST00000483021 WFDC13Q8IUB5 93 aa9.45□□□□□ -0.9
R3HDM1-215ENST00000483021 LOC110117498A0A087WWA1 95 aa9.43□□□□□ -0.9
R3HDM1-215ENST00000483021 PDE6GP18545 87 aa9.43□□□□□ -0.9
R3HDM1-215ENST00000483021 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
R3HDM1-215ENST00000483021 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
R3HDM1-215ENST00000483021 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
R3HDM1-215ENST00000483021 Q6ZVQ6 151 aa9.4□□□□□ -0.9
R3HDM1-215ENST00000483021 MACF1Q9UPN3 7388 aaKnown RBP9.4□□□□□ -0.91
R3HDM1-215ENST00000483021 M0R143 59 aa9.37□□□□□ -0.91
R3HDM1-215ENST00000483021 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
R3HDM1-215ENST00000483021 C14orf132Q9NPU4 83 aa9.34□□□□□ -0.91
R3HDM1-215ENST00000483021 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
R3HDM1-215ENST00000483021 NREPQ16612 68 aa9.32□□□□□ -0.92
R3HDM1-215ENST00000483021 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
R3HDM1-215ENST00000483021 SYNE2Q8WXH0 6885 aaKnown RBP9.31□□□□□ -0.92
R3HDM1-215ENST00000483021 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
R3HDM1-215ENST00000483021 MRPL34Q9BQ48 92 aaKnown RBP9.31□□□□□ -0.92
R3HDM1-215ENST00000483021 MMP24-AS1A0A0U1RRL7 71 aa9.29□□□□□ -0.92
R3HDM1-215ENST00000483021 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
R3HDM1-215ENST00000483021 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
R3HDM1-215ENST00000483021 NDUFS5O43920 106 aa9.23□□□□□ -0.93
R3HDM1-215ENST00000483021 K7EQZ3 153 aa9.21□□□□□ -0.94
R3HDM1-215ENST00000483021 C7orf65Q6ZTY9 151 aa9.16□□□□□ -0.94
R3HDM1-215ENST00000483021 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
R3HDM1-215ENST00000483021 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
R3HDM1-215ENST00000483021 H3BT86 120 aa9.14□□□□□ -0.95
R3HDM1-215ENST00000483021 BPY2O14599 106 aa9.13□□□□□ -0.95
R3HDM1-215ENST00000483021 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
R3HDM1-215ENST00000483021 BATFQ16520 125 aa9.09□□□□□ -0.95
R3HDM1-215ENST00000483021 Q5W150 140 aa9.08□□□□□ -0.96
R3HDM1-215ENST00000483021 TSTD3H0UI37 97 aa9.07□□□□□ -0.96
R3HDM1-215ENST00000483021 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
R3HDM1-215ENST00000483021 C9orf118A6NHY6 69 aa9.04□□□□□ -0.96
R3HDM1-215ENST00000483021 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
R3HDM1-215ENST00000483021 LOC105371267A0A1B0GV96 52 aa9.02□□□□□ -0.97
R3HDM1-215ENST00000483021 A0A1W2PPM0 123 aa9.02□□□□□ -0.97
R3HDM1-215ENST00000483021 Q8N9L7 120 aa9.01□□□□□ -0.97
R3HDM1-215ENST00000483021 CXCL6P80162 114 aa9□□□□□ -0.97
R3HDM1-215ENST00000483021 C4orf26Q17RF5 130 aa9□□□□□ -0.97
R3HDM1-215ENST00000483021 KRTAP6-3Q3LI67 103 aa9□□□□□ -0.97
R3HDM1-215ENST00000483021 TAX1BP3O14907 124 aa8.97□□□□□ -0.97
R3HDM1-215ENST00000483021 FAM236AA0A1B0GUQ0 79 aa8.92□□□□□ -0.98
R3HDM1-215ENST00000483021 FAM236BA0A1B0GV22 79 aa8.92□□□□□ -0.98
R3HDM1-215ENST00000483021 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
R3HDM1-215ENST00000483021 H3BS24 57 aa8.9□□□□□ -0.98
R3HDM1-215ENST00000483021 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
R3HDM1-215ENST00000483021 SPCS1Q9Y6A9 102 aa8.88□□□□□ -0.99
R3HDM1-215ENST00000483021 S4R3F8 94 aa8.88□□□□□ -0.99
R3HDM1-215ENST00000483021 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
R3HDM1-215ENST00000483021 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
R3HDM1-215ENST00000483021 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
R3HDM1-215ENST00000483021 A6NN06 94 aa8.81□□□□□ -1
R3HDM1-215ENST00000483021 Q5VV11 94 aa8.81□□□□□ -1
R3HDM1-215ENST00000483021 MT1BP07438 61 aa8.79□□□□□ -1
R3HDM1-215ENST00000483021 LCA10Q71F78 164 aa8.79□□□□□ -1
R3HDM1-215ENST00000483021 SPRR2GQ9BYE4 73 aa8.78□□□□□ -1
R3HDM1-215ENST00000483021 TP53AIP1Q9HCN2 124 aa8.78□□□□□ -1
R3HDM1-215ENST00000483021 NEBP20929 6669 aa8.77□□□□□ -1.01
R3HDM1-215ENST00000483021 KRTAP19-8Q3LI54 63 aa8.76□□□□□ -1.01
R3HDM1-215ENST00000483021 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
R3HDM1-215ENST00000483021 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
R3HDM1-215ENST00000483021 K7EP34 96 aa8.68□□□□□ -1.02
R3HDM1-215ENST00000483021 COL5A1-AS1Q5SY13 56 aa8.67□□□□□ -1.02
R3HDM1-215ENST00000483021 KRTAP10-5P60370 271 aa8.66□□□□□ -1.02
R3HDM1-215ENST00000483021 MUC12Q9UKN1 5478 aa8.65□□□□□ -1.02
R3HDM1-215ENST00000483021 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
R3HDM1-215ENST00000483021 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
R3HDM1-215ENST00000483021 PCP4L1A6NKN8 68 aa8.59□□□□□ -1.03
R3HDM1-215ENST00000483021 TRAV22A0A0B4J277 110 aa8.55□□□□□ -1.04
R3HDM1-215ENST00000483021 GTF2H5Q6ZYL4 71 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms