RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 J3KT08 172 aa11.07□□□□□ -0.64
TRAPPC12-220ENST00000482645 CDIP1Q9H305 208 aa11.05□□□□□ -0.64
TRAPPC12-220ENST00000482645 KRTAP13-3Q3SY46 172 aa11.04□□□□□ -0.64
TRAPPC12-220ENST00000482645 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
TRAPPC12-220ENST00000482645 LINC00643Q86TS7 51 aa11.02□□□□□ -0.65
TRAPPC12-220ENST00000482645 IGKV3D-7A0A0C4DH55 119 aa11.01□□□□□ -0.65
TRAPPC12-220ENST00000482645 DSCR10P59022 87 aa11.01□□□□□ -0.65
TRAPPC12-220ENST00000482645 A8MWP4 228 aa11□□□□□ -0.65
TRAPPC12-220ENST00000482645 ATP5EP2Q5VTU8 51 aa11□□□□□ -0.65
TRAPPC12-220ENST00000482645 CXCL6P80162 114 aa10.99□□□□□ -0.65
TRAPPC12-220ENST00000482645 K7EQZ3 153 aa10.99□□□□□ -0.65
TRAPPC12-220ENST00000482645 Q8N9L7 120 aa10.99□□□□□ -0.65
TRAPPC12-220ENST00000482645 NDUFB1O75438 58 aa10.98□□□□□ -0.65
TRAPPC12-220ENST00000482645 IGHV6-1A0A0B4J1U7 121 aa10.97□□□□□ -0.65
TRAPPC12-220ENST00000482645 A0A1B0GVX0 72 aa10.97□□□□□ -0.65
TRAPPC12-220ENST00000482645 UBR4Q5T4S7 5183 aa10.96□□□□□ -0.65
TRAPPC12-220ENST00000482645 PRR15Q8IV56 129 aa10.94□□□□□ -0.66
TRAPPC12-220ENST00000482645 XP32Q5T750 250 aa10.9□□□□□ -0.66
TRAPPC12-220ENST00000482645 HIST1H4AP62805 103 aaKnown RBP10.89□□□□□ -0.67
TRAPPC12-220ENST00000482645 MT-ATP8P03928 68 aa10.88□□□□□ -0.67
TRAPPC12-220ENST00000482645 NOTCH2NLQ7Z3S9 236 aa10.88□□□□□ -0.67
TRAPPC12-220ENST00000482645 C8orf87E5RJ46 101 aa10.87□□□□□ -0.67
TRAPPC12-220ENST00000482645 LINC00313P59037 77 aa10.86□□□□□ -0.67
TRAPPC12-220ENST00000482645 C8orf17Q9NRJ1 99 aa10.86□□□□□ -0.67
TRAPPC12-220ENST00000482645 MMP24-AS1A0A0U1RRL7 71 aa10.84□□□□□ -0.67
TRAPPC12-220ENST00000482645 A0A087WVE0 104 aa10.82□□□□□ -0.68
TRAPPC12-220ENST00000482645 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
TRAPPC12-220ENST00000482645 HCG22E2RYF7 251 aa10.79□□□□□ -0.68
TRAPPC12-220ENST00000482645 MUC17Q685J3 4493 aa10.78□□□□□ -0.68
TRAPPC12-220ENST00000482645 hDV103S1A0JD37 113 aa10.77□□□□□ -0.69
TRAPPC12-220ENST00000482645 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.69
TRAPPC12-220ENST00000482645 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
TRAPPC12-220ENST00000482645 SEC61BP60468 96 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-220ENST00000482645 RNF213Q63HN8 5207 aa10.74□□□□□ -0.69
TRAPPC12-220ENST00000482645 TMEM254Q8TBM7 123 aa10.74□□□□□ -0.69
TRAPPC12-220ENST00000482645 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-220ENST00000482645 IMUPQ9GZP8 106 aa10.73□□□□□ -0.69
TRAPPC12-220ENST00000482645 MRPL34Q9BQ48 92 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-220ENST00000482645 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
TRAPPC12-220ENST00000482645 Q75L30 129 aa10.68□□□□□ -0.7
TRAPPC12-220ENST00000482645 NDUFS5O43920 106 aa10.67□□□□□ -0.7
TRAPPC12-220ENST00000482645 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
TRAPPC12-220ENST00000482645 MUC2Q02817 5179 aa10.66□□□□□ -0.7
TRAPPC12-220ENST00000482645 A8MUU9 505 aa10.64□□□□□ -0.71
TRAPPC12-220ENST00000482645 Q8N9P0 234 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC12-220ENST00000482645 FAM236AA0A1B0GUQ0 79 aa10.62□□□□□ -0.71
TRAPPC12-220ENST00000482645 FAM236BA0A1B0GV22 79 aa10.62□□□□□ -0.71
TRAPPC12-220ENST00000482645 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
TRAPPC12-220ENST00000482645 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
TRAPPC12-220ENST00000482645 KRTAP4-1Q9BYQ7 146 aa10.55□□□□□ -0.72
TRAPPC12-220ENST00000482645 ZCCHC13Q8WW36 166 aaKnown RBP10.5□□□□□ -0.73
TRAPPC12-220ENST00000482645 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
TRAPPC12-220ENST00000482645 OCR1Q9BZK8 76 aa10.47□□□□□ -0.73
TRAPPC12-220ENST00000482645 ATOX1O00244 68 aa10.45□□□□□ -0.74
TRAPPC12-220ENST00000482645 Q5W150 140 aa10.44□□□□□ -0.74
TRAPPC12-220ENST00000482645 UQCRQO14949 82 aa10.43□□□□□ -0.74
TRAPPC12-220ENST00000482645 TRAV22A0A0B4J277 110 aa10.4□□□□□ -0.74
TRAPPC12-220ENST00000482645 SMIM20Q8N5G0 67 aa10.38□□□□□ -0.75
TRAPPC12-220ENST00000482645 H0Y9P7 68 aa10.36□□□□□ -0.75
TRAPPC12-220ENST00000482645 TRAV7A0A075B6U4 112 aa10.35□□□□□ -0.75
TRAPPC12-220ENST00000482645 A0A0U1RQV1 116 aa10.35□□□□□ -0.75
TRAPPC12-220ENST00000482645 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
TRAPPC12-220ENST00000482645 IGKV2D-30A0A075B6S6 120 aa10.31□□□□□ -0.76
TRAPPC12-220ENST00000482645 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
TRAPPC12-220ENST00000482645 MP68P56378 58 aa10.3□□□□□ -0.76
TRAPPC12-220ENST00000482645 FAT4Q6V0I7 4981 aa10.3□□□□□ -0.76
TRAPPC12-220ENST00000482645 C5orf47Q569G3 176 aa10.29□□□□□ -0.76
TRAPPC12-220ENST00000482645 SERP2Q8N6R1 65 aa10.29□□□□□ -0.76
TRAPPC12-220ENST00000482645 SPINK7P58062 85 aa10.27□□□□□ -0.77
TRAPPC12-220ENST00000482645 C7orf65Q6ZTY9 151 aa10.26□□□□□ -0.77
TRAPPC12-220ENST00000482645 LINC00208Q96KT6 92 aa10.25□□□□□ -0.77
TRAPPC12-220ENST00000482645 LOC101927531A0A1B0GV80 90 aa10.23□□□□□ -0.77
TRAPPC12-220ENST00000482645 C1orf64Q8NEQ6 169 aa10.23□□□□□ -0.77
TRAPPC12-220ENST00000482645 RPS28P62857 69 aaKnown RBP10.23□□□□□ -0.77
TRAPPC12-220ENST00000482645 COX6B2Q6YFQ2 88 aa10.21□□□□□ -0.78
TRAPPC12-220ENST00000482645 H3BPC8 53 aa10.19□□□□□ -0.78
TRAPPC12-220ENST00000482645 COX7CP15954 63 aa10.18□□□□□ -0.78
TRAPPC12-220ENST00000482645 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
TRAPPC12-220ENST00000482645 HRES1P13985 223 aa10.17□□□□□ -0.78
TRAPPC12-220ENST00000482645 CYP4F30PQ9H0H9 118 aa10.17□□□□□ -0.78
TRAPPC12-220ENST00000482645 C20orf197Q8N268 126 aa10.16□□□□□ -0.78
TRAPPC12-220ENST00000482645 SNURFQ9Y675 71 aa10.14□□□□□ -0.79
TRAPPC12-220ENST00000482645 LCE2CQ5TA81 110 aa10.13□□□□□ -0.79
TRAPPC12-220ENST00000482645 RBM12B-AS1Q9P1G2 102 aa10.12□□□□□ -0.79
TRAPPC12-220ENST00000482645 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
TRAPPC12-220ENST00000482645 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
TRAPPC12-220ENST00000482645 KLKP1Q107X0 134 aa10.08□□□□□ -0.8
TRAPPC12-220ENST00000482645 MPLKIPQ8TAP9 179 aa10.07□□□□□ -0.8
TRAPPC12-220ENST00000482645 TMEM258P61165 79 aa10.05□□□□□ -0.8
TRAPPC12-220ENST00000482645 C4orf26Q17RF5 130 aa10.03□□□□□ -0.8
TRAPPC12-220ENST00000482645 LCE2AQ5TA79 106 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-220ENST00000482645 FLGP20930 4061 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC12-220ENST00000482645 MT1HP80294 61 aa10.01□□□□□ -0.81
TRAPPC12-220ENST00000482645 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
TRAPPC12-220ENST00000482645 M0R2T5 61 aa9.94□□□□□ -0.82
TRAPPC12-220ENST00000482645 NDUFC1O43677 76 aa9.89□□□□□ -0.83
TRAPPC12-220ENST00000482645 H7BZZ5 65 aa9.87□□□□□ -0.83
TRAPPC12-220ENST00000482645 KRTAP3-1Q9BYR8 98 aa9.86□□□□□ -0.83
TRAPPC12-220ENST00000482645 H1FX-AS1Q4G0G2 97 aa9.82□□□□□ -0.84
TRAPPC12-220ENST00000482645 SPANXA2-OT1Q8N9U9 137 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms