RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 A0A1B0GW54 56 aa7.29□□□□□ -1.24
HDAC1-208ENST00000482310 IGHV6-1A0A0B4J1U7 121 aa7.26□□□□□ -1.25
HDAC1-208ENST00000482310 DSCR10P59022 87 aa7.26□□□□□ -1.25
HDAC1-208ENST00000482310 LINC00846Q9NV44 126 aa7.26□□□□□ -1.25
HDAC1-208ENST00000482310 XP32Q5T750 250 aa7.25□□□□□ -1.25
HDAC1-208ENST00000482310 Q6ZVQ6 151 aa7.25□□□□□ -1.25
HDAC1-208ENST00000482310 J3KT08 172 aa7.23□□□□□ -1.25
HDAC1-208ENST00000482310 UBL5Q9BZL1 73 aa7.22□□□□□ -1.25
HDAC1-208ENST00000482310 A0A1B0GVX0 72 aa7.21□□□□□ -1.26
HDAC1-208ENST00000482310 BPY2O14599 106 aa7.21□□□□□ -1.26
HDAC1-208ENST00000482310 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
HDAC1-208ENST00000482310 A8MWP4 228 aa7.19□□□□□ -1.26
HDAC1-208ENST00000482310 NDUFB1O75438 58 aa7.19□□□□□ -1.26
HDAC1-208ENST00000482310 LINC00313P59037 77 aa7.19□□□□□ -1.26
HDAC1-208ENST00000482310 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
HDAC1-208ENST00000482310 K7EQZ3 153 aa7.17□□□□□ -1.26
HDAC1-208ENST00000482310 Q8N9L7 120 aa7.17□□□□□ -1.26
HDAC1-208ENST00000482310 MUC2Q02817 5179 aa7.16□□□□□ -1.26
HDAC1-208ENST00000482310 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
HDAC1-208ENST00000482310 ACYP1P07311 99 aa7.14□□□□□ -1.27
HDAC1-208ENST00000482310 FAM240AA0A1B0GVK7 77 aa7.13□□□□□ -1.27
HDAC1-208ENST00000482310 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
HDAC1-208ENST00000482310 C8orf17Q9NRJ1 99 aa7.13□□□□□ -1.27
HDAC1-208ENST00000482310 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
HDAC1-208ENST00000482310 KRTAP16-1A8MUX0 517 aa7.12□□□□□ -1.27
HDAC1-208ENST00000482310 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
HDAC1-208ENST00000482310 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
HDAC1-208ENST00000482310 PCOTHQ58A44 107 aa7.11□□□□□ -1.27
HDAC1-208ENST00000482310 KRTAP9-2Q9BYQ4 174 aa7.11□□□□□ -1.27
HDAC1-208ENST00000482310 J3QR89 54 aa7.1□□□□□ -1.27
HDAC1-208ENST00000482310 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
HDAC1-208ENST00000482310 Q75L30 129 aa7.08□□□□□ -1.28
HDAC1-208ENST00000482310 WFDC13Q8IUB5 93 aa7.08□□□□□ -1.28
HDAC1-208ENST00000482310 A8MUU9 505 aa7.07□□□□□ -1.28
HDAC1-208ENST00000482310 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
HDAC1-208ENST00000482310 CXCL6P80162 114 aa7.06□□□□□ -1.28
HDAC1-208ENST00000482310 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
HDAC1-208ENST00000482310 ATP11AUNQ6ZP68 121 aa7.05□□□□□ -1.28
HDAC1-208ENST00000482310 NDUFS5O43920 106 aa7.03□□□□□ -1.28
HDAC1-208ENST00000482310 CASC2Q6XLA1 102 aa7.03□□□□□ -1.28
HDAC1-208ENST00000482310 TMEM254Q8TBM7 123 aa7.03□□□□□ -1.28
HDAC1-208ENST00000482310 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
HDAC1-208ENST00000482310 HIST1H4AP62805 103 aaKnown RBP7.02□□□□□ -1.29
HDAC1-208ENST00000482310 MRPL34Q9BQ48 92 aaKnown RBP7.02□□□□□ -1.29
HDAC1-208ENST00000482310 KRTAP4-1Q9BYQ7 146 aa7.02□□□□□ -1.29
HDAC1-208ENST00000482310 HCG22E2RYF7 251 aa7.01□□□□□ -1.29
HDAC1-208ENST00000482310 ATP5EP2Q5VTU8 51 aa7.01□□□□□ -1.29
HDAC1-208ENST00000482310 LINC00643Q86TS7 51 aa7.01□□□□□ -1.29
HDAC1-208ENST00000482310 K7ERU9 68 aa7□□□□□ -1.29
HDAC1-208ENST00000482310 Q8N9P0 234 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-208ENST00000482310 A0A087WVE0 104 aa6.96□□□□□ -1.3
HDAC1-208ENST00000482310 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
HDAC1-208ENST00000482310 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
HDAC1-208ENST00000482310 MT-ATP8P03928 68 aa6.89□□□□□ -1.31
HDAC1-208ENST00000482310 Q5W150 140 aa6.87□□□□□ -1.31
HDAC1-208ENST00000482310 A0A0U1RQV1 116 aa6.84□□□□□ -1.31
HDAC1-208ENST00000482310 IGKV2D-30A0A075B6S6 120 aa6.82□□□□□ -1.32
HDAC1-208ENST00000482310 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
HDAC1-208ENST00000482310 SPINK7P58062 85 aa6.82□□□□□ -1.32
HDAC1-208ENST00000482310 TP53AIP1Q9HCN2 124 aa6.8□□□□□ -1.32
HDAC1-208ENST00000482310 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
HDAC1-208ENST00000482310 SCGB1A1P11684 91 aa6.77□□□□□ -1.33
HDAC1-208ENST00000482310 HRES1P13985 223 aa6.76□□□□□ -1.33
HDAC1-208ENST00000482310 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
HDAC1-208ENST00000482310 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
HDAC1-208ENST00000482310 FAM236DA0A1B0GTK5 79 aa6.75□□□□□ -1.33
HDAC1-208ENST00000482310 FAM236CP0DP71 79 aa6.75□□□□□ -1.33
HDAC1-208ENST00000482310 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
HDAC1-208ENST00000482310 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
HDAC1-208ENST00000482310 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
HDAC1-208ENST00000482310 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
HDAC1-208ENST00000482310 H0Y9P7 68 aa6.73□□□□□ -1.33
HDAC1-208ENST00000482310 UQCRQO14949 82 aa6.73□□□□□ -1.33
HDAC1-208ENST00000482310 RBM12B-AS1Q9P1G2 102 aa6.72□□□□□ -1.33
HDAC1-208ENST00000482310 OCR1Q9BZK8 76 aa6.71□□□□□ -1.34
HDAC1-208ENST00000482310 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
HDAC1-208ENST00000482310 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
HDAC1-208ENST00000482310 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
HDAC1-208ENST00000482310 LINC00208Q96KT6 92 aa6.65□□□□□ -1.34
HDAC1-208ENST00000482310 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
HDAC1-208ENST00000482310 ATOX1O00244 68 aa6.64□□□□□ -1.35
HDAC1-208ENST00000482310 MP68P56378 58 aa6.64□□□□□ -1.35
HDAC1-208ENST00000482310 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
HDAC1-208ENST00000482310 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
HDAC1-208ENST00000482310 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-208ENST00000482310 MT1HP80294 61 aa6.63□□□□□ -1.35
HDAC1-208ENST00000482310 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
HDAC1-208ENST00000482310 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
HDAC1-208ENST00000482310 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
HDAC1-208ENST00000482310 M0R2T5 61 aa6.61□□□□□ -1.35
HDAC1-208ENST00000482310 C5orf47Q569G3 176 aa6.6□□□□□ -1.35
HDAC1-208ENST00000482310 TRAV7A0A075B6U4 112 aa6.59□□□□□ -1.35
HDAC1-208ENST00000482310 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
HDAC1-208ENST00000482310 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
HDAC1-208ENST00000482310 H3BPC8 53 aa6.53□□□□□ -1.36
HDAC1-208ENST00000482310 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
HDAC1-208ENST00000482310 SNURFQ9Y675 71 aa6.51□□□□□ -1.37
HDAC1-208ENST00000482310 SERP2Q8N6R1 65 aa6.5□□□□□ -1.37
HDAC1-208ENST00000482310 KRTAP3-1Q9BYR8 98 aa6.5□□□□□ -1.37
HDAC1-208ENST00000482310 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms