RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 TRIAP1O43715 76 aa4.55□□□□□ -1.68
SMARCE1-210ENST00000481231 PRO1854Q9UHT4 67 aa4.55□□□□□ -1.68
SMARCE1-210ENST00000481231 KMT2DO14686 5537 aa4.55□□□□□ -1.68
SMARCE1-210ENST00000481231 S100A6P06703 90 aa4.54□□□□□ -1.68
SMARCE1-210ENST00000481231 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
SMARCE1-210ENST00000481231 MTURNQ8N3F0 131 aa4.54□□□□□ -1.68
SMARCE1-210ENST00000481231 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
SMARCE1-210ENST00000481231 TRACP01848 142 aa4.53□□□□□ -1.68
SMARCE1-210ENST00000481231 CCKP06307 115 aa4.53□□□□□ -1.68
SMARCE1-210ENST00000481231 SPINK7P58062 85 aa4.53□□□□□ -1.68
SMARCE1-210ENST00000481231 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
SMARCE1-210ENST00000481231 PAM16Q9Y3D7 125 aa4.53□□□□□ -1.68
SMARCE1-210ENST00000481231 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 C8orf87E5RJ46 101 aa4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 DNAL4O96015 105 aa4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 FXYD2P54710 66 aa4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 CEND1Q8N111 149 aa4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
SMARCE1-210ENST00000481231 SPATA45Q537H7 98 aa4.51□□□□□ -1.69
SMARCE1-210ENST00000481231 H3BQ85 93 aa4.5□□□□□ -1.69
SMARCE1-210ENST00000481231 A8MWP4 228 aa4.49□□□□□ -1.69
SMARCE1-210ENST00000481231 TMEM256-PLSCR3K7ERE1 68 aa4.49□□□□□ -1.69
SMARCE1-210ENST00000481231 KRTAP5-9P26371 169 aa4.49□□□□□ -1.69
SMARCE1-210ENST00000481231 WFDC13Q8IUB5 93 aa4.49□□□□□ -1.69
SMARCE1-210ENST00000481231 K7ERJ3 54 aa4.48□□□□□ -1.69
SMARCE1-210ENST00000481231 VPS25Q9BRG1 176 aa4.48□□□□□ -1.69
SMARCE1-210ENST00000481231 VAMP8Q9BV40 100 aa4.48□□□□□ -1.69
SMARCE1-210ENST00000481231 PSMB2P49721 201 aa4.47□□□□□ -1.69
SMARCE1-210ENST00000481231 UBE2V1Q13404 147 aa4.47□□□□□ -1.69
SMARCE1-210ENST00000481231 S100A1P23297 94 aa4.45□□□□□ -1.7
SMARCE1-210ENST00000481231 J3KT08 172 aa4.44□□□□□ -1.7
SMARCE1-210ENST00000481231 COX6CP09669 75 aa4.44□□□□□ -1.7
SMARCE1-210ENST00000481231 RBM3P98179 157 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-210ENST00000481231 C21orf62-AS1Q17RA5 79 aa4.44□□□□□ -1.7
SMARCE1-210ENST00000481231 A6NN06 94 aa4.43□□□□□ -1.7
SMARCE1-210ENST00000481231 DSCR8Q96T75 97 aa4.43□□□□□ -1.7
SMARCE1-210ENST00000481231 HSD52Q0P140 79 aa4.42□□□□□ -1.7
SMARCE1-210ENST00000481231 LYRM7Q5U5X0 104 aa4.42□□□□□ -1.7
SMARCE1-210ENST00000481231 Q6ZQT0 140 aa4.42□□□□□ -1.7
SMARCE1-210ENST00000481231 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
SMARCE1-210ENST00000481231 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
SMARCE1-210ENST00000481231 NDUFB1O75438 58 aa4.41□□□□□ -1.7
SMARCE1-210ENST00000481231 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
SMARCE1-210ENST00000481231 C8orf17Q9NRJ1 99 aa4.41□□□□□ -1.7
SMARCE1-210ENST00000481231 C9JAW5 83 aa4.4□□□□□ -1.71
SMARCE1-210ENST00000481231 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
SMARCE1-210ENST00000481231 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
SMARCE1-210ENST00000481231 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
SMARCE1-210ENST00000481231 BAALC-AS2P0C853 105 aa4.37□□□□□ -1.71
SMARCE1-210ENST00000481231 SCGB1C2P0DMR2 95 aa4.37□□□□□ -1.71
SMARCE1-210ENST00000481231 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
SMARCE1-210ENST00000481231 Q6ZVQ6 151 aa4.37□□□□□ -1.71
SMARCE1-210ENST00000481231 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
SMARCE1-210ENST00000481231 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
SMARCE1-210ENST00000481231 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
SMARCE1-210ENST00000481231 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
SMARCE1-210ENST00000481231 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
SMARCE1-210ENST00000481231 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
SMARCE1-210ENST00000481231 SPRR2EP22531 72 aa4.33□□□□□ -1.72
SMARCE1-210ENST00000481231 SPRR2BP35325 72 aa4.33□□□□□ -1.72
SMARCE1-210ENST00000481231 SPRR2AP35326 72 aa4.33□□□□□ -1.72
SMARCE1-210ENST00000481231 PYY3Q5JQD4 70 aa4.33□□□□□ -1.72
SMARCE1-210ENST00000481231 MMP24-AS1A0A0U1RRL7 71 aa4.32□□□□□ -1.72
SMARCE1-210ENST00000481231 A0A1B0GW54 56 aa4.32□□□□□ -1.72
SMARCE1-210ENST00000481231 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
SMARCE1-210ENST00000481231 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-210ENST00000481231 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
SMARCE1-210ENST00000481231 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
SMARCE1-210ENST00000481231 JMJD7-PLA2G4BH0Y9G9 81 aa4.3□□□□□ -1.72
SMARCE1-210ENST00000481231 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
SMARCE1-210ENST00000481231 NDUFS5O43920 106 aa4.29□□□□□ -1.72
SMARCE1-210ENST00000481231 MT1BP07438 61 aa4.29□□□□□ -1.72
SMARCE1-210ENST00000481231 PDE6GP18545 87 aa4.29□□□□□ -1.72
SMARCE1-210ENST00000481231 C14orf132Q9NPU4 83 aa4.29□□□□□ -1.72
SMARCE1-210ENST00000481231 hDV103S1A0JD37 113 aa4.28□□□□□ -1.72
SMARCE1-210ENST00000481231 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
SMARCE1-210ENST00000481231 NREPQ16612 68 aa4.28□□□□□ -1.72
SMARCE1-210ENST00000481231 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
SMARCE1-210ENST00000481231 Q5W150 140 aa4.27□□□□□ -1.73
SMARCE1-210ENST00000481231 C7orf65Q6ZTY9 151 aa4.27□□□□□ -1.73
SMARCE1-210ENST00000481231 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
SMARCE1-210ENST00000481231 K7EQZ3 153 aa4.26□□□□□ -1.73
SMARCE1-210ENST00000481231 NAA38Q9BRA0 125 aaKnown RBP4.26□□□□□ -1.73
SMARCE1-210ENST00000481231 C4orf26Q17RF5 130 aa4.25□□□□□ -1.73
SMARCE1-210ENST00000481231 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
SMARCE1-210ENST00000481231 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
SMARCE1-210ENST00000481231 C5orf47Q569G3 176 aa4.24□□□□□ -1.73
SMARCE1-210ENST00000481231 Q5VV11 94 aa4.24□□□□□ -1.73
SMARCE1-210ENST00000481231 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
SMARCE1-210ENST00000481231 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
SMARCE1-210ENST00000481231 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
SMARCE1-210ENST00000481231 BPY2O14599 106 aa4.19□□□□□ -1.74
SMARCE1-210ENST00000481231 SPRR2DP22532 72 aa4.19□□□□□ -1.74
SMARCE1-210ENST00000481231 Q8N9L7 120 aa4.19□□□□□ -1.74
SMARCE1-210ENST00000481231 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
SMARCE1-210ENST00000481231 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
SMARCE1-210ENST00000481231 M0R143 59 aa4.18□□□□□ -1.74
SMARCE1-210ENST00000481231 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
SMARCE1-210ENST00000481231 CSAG1Q6PB30 78 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms