RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 FAM236DA0A1B0GTK5 79 aa4.47□□□□□ -1.69
XRCC6-208ENST00000478914 FAM236CP0DP71 79 aa4.47□□□□□ -1.69
XRCC6-208ENST00000478914 DEFB116Q30KQ4 102 aa4.47□□□□□ -1.69
XRCC6-208ENST00000478914 VPS25Q9BRG1 176 aa4.47□□□□□ -1.69
XRCC6-208ENST00000478914 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
XRCC6-208ENST00000478914 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
XRCC6-208ENST00000478914 RBM3P98179 157 aaKnown RBP4.46□□□□□ -1.7
XRCC6-208ENST00000478914 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
XRCC6-208ENST00000478914 DSCR8Q96T75 97 aa4.46□□□□□ -1.7
XRCC6-208ENST00000478914 LINC00472Q9H8W2 130 aa4.45□□□□□ -1.7
XRCC6-208ENST00000478914 RBM12B-AS1Q9P1G2 102 aa4.45□□□□□ -1.7
XRCC6-208ENST00000478914 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
XRCC6-208ENST00000478914 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
XRCC6-208ENST00000478914 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
XRCC6-208ENST00000478914 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
XRCC6-208ENST00000478914 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
XRCC6-208ENST00000478914 C9JAW5 83 aa4.42□□□□□ -1.7
XRCC6-208ENST00000478914 J3KT08 172 aa4.42□□□□□ -1.7
XRCC6-208ENST00000478914 BAALC-AS2P0C853 105 aa4.42□□□□□ -1.7
XRCC6-208ENST00000478914 M0R143 59 aa4.4□□□□□ -1.71
XRCC6-208ENST00000478914 NDUFB1O75438 58 aa4.4□□□□□ -1.71
XRCC6-208ENST00000478914 ATXN8Q156A1 80 aa4.39□□□□□ -1.71
XRCC6-208ENST00000478914 MTURNQ8N3F0 131 aa4.39□□□□□ -1.71
XRCC6-208ENST00000478914 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
XRCC6-208ENST00000478914 JMJD7-PLA2G4BH0Y9G9 81 aa4.38□□□□□ -1.71
XRCC6-208ENST00000478914 HRES1P13985 223 aa4.38□□□□□ -1.71
XRCC6-208ENST00000478914 Q6ZQT0 140 aa4.37□□□□□ -1.71
XRCC6-208ENST00000478914 ZCCHC13Q8WW36 166 aaKnown RBP4.37□□□□□ -1.71
XRCC6-208ENST00000478914 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
XRCC6-208ENST00000478914 PDE6GP18545 87 aa4.36□□□□□ -1.71
XRCC6-208ENST00000478914 LYRM7Q5U5X0 104 aa4.36□□□□□ -1.71
XRCC6-208ENST00000478914 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
XRCC6-208ENST00000478914 A0A1B0GW54 56 aa4.35□□□□□ -1.71
XRCC6-208ENST00000478914 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
XRCC6-208ENST00000478914 LOC110117498A0A087WWA1 95 aa4.34□□□□□ -1.71
XRCC6-208ENST00000478914 A8MWP4 228 aa4.34□□□□□ -1.71
XRCC6-208ENST00000478914 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
XRCC6-208ENST00000478914 SPINK7P58062 85 aa4.33□□□□□ -1.72
XRCC6-208ENST00000478914 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
XRCC6-208ENST00000478914 Q8N9P0 234 aaPredicted RBP4.33□□□□□ -1.72
XRCC6-208ENST00000478914 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
XRCC6-208ENST00000478914 MT2AP02795 61 aa4.32□□□□□ -1.72
XRCC6-208ENST00000478914 KRTAP10-10P60014 251 aa4.32□□□□□ -1.72
XRCC6-208ENST00000478914 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
XRCC6-208ENST00000478914 NREPQ16612 68 aa4.31□□□□□ -1.72
XRCC6-208ENST00000478914 USH2AO75445 5202 aa4.3□□□□□ -1.72
XRCC6-208ENST00000478914 IGKV3D-7A0A0C4DH55 119 aa4.3□□□□□ -1.72
XRCC6-208ENST00000478914 SMIM6P0DI80 62 aa4.3□□□□□ -1.72
XRCC6-208ENST00000478914 Q6ZVQ6 151 aa4.3□□□□□ -1.72
XRCC6-208ENST00000478914 BATFQ16520 125 aa4.29□□□□□ -1.72
XRCC6-208ENST00000478914 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
XRCC6-208ENST00000478914 PRR15Q8IV56 129 aa4.29□□□□□ -1.72
XRCC6-208ENST00000478914 TSTD3H0UI37 97 aa4.28□□□□□ -1.72
XRCC6-208ENST00000478914 MT1FP04733 61 aa4.28□□□□□ -1.72
XRCC6-208ENST00000478914 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
XRCC6-208ENST00000478914 NDUFS5O43920 106 aa4.26□□□□□ -1.73
XRCC6-208ENST00000478914 MRPL34Q9BQ48 92 aaKnown RBP4.26□□□□□ -1.73
XRCC6-208ENST00000478914 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
XRCC6-208ENST00000478914 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
XRCC6-208ENST00000478914 hDV103S1A0JD37 113 aa4.25□□□□□ -1.73
XRCC6-208ENST00000478914 C9orf118A6NHY6 69 aa4.25□□□□□ -1.73
XRCC6-208ENST00000478914 H3BT86 120 aa4.25□□□□□ -1.73
XRCC6-208ENST00000478914 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
XRCC6-208ENST00000478914 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
XRCC6-208ENST00000478914 K7EQZ3 153 aa4.23□□□□□ -1.73
XRCC6-208ENST00000478914 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
XRCC6-208ENST00000478914 BPY2O14599 106 aa4.22□□□□□ -1.73
XRCC6-208ENST00000478914 PCP4P48539 62 aa4.22□□□□□ -1.73
XRCC6-208ENST00000478914 A0A1W2PPM0 123 aa4.21□□□□□ -1.74
XRCC6-208ENST00000478914 LINC00846Q9NV44 126 aa4.21□□□□□ -1.74
XRCC6-208ENST00000478914 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
XRCC6-208ENST00000478914 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
XRCC6-208ENST00000478914 TAX1BP3O14907 124 aa4.19□□□□□ -1.74
XRCC6-208ENST00000478914 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
XRCC6-208ENST00000478914 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
XRCC6-208ENST00000478914 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
XRCC6-208ENST00000478914 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
XRCC6-208ENST00000478914 SPCS1Q9Y6A9 102 aa4.16□□□□□ -1.74
XRCC6-208ENST00000478914 Q8N9L7 120 aa4.15□□□□□ -1.75
XRCC6-208ENST00000478914 CXCL6P80162 114 aa4.14□□□□□ -1.75
XRCC6-208ENST00000478914 Q5W150 140 aa4.14□□□□□ -1.75
XRCC6-208ENST00000478914 UBL5Q9BZL1 73 aa4.14□□□□□ -1.75
XRCC6-208ENST00000478914 LOC105371267A0A1B0GV96 52 aa4.12□□□□□ -1.75
XRCC6-208ENST00000478914 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
XRCC6-208ENST00000478914 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
XRCC6-208ENST00000478914 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
XRCC6-208ENST00000478914 COL5A1-AS1Q5SY13 56 aa4.1□□□□□ -1.75
XRCC6-208ENST00000478914 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
XRCC6-208ENST00000478914 K7EP34 96 aa4.07□□□□□ -1.76
XRCC6-208ENST00000478914 FAM236AA0A1B0GUQ0 79 aa4.06□□□□□ -1.76
XRCC6-208ENST00000478914 FAM236BA0A1B0GV22 79 aa4.06□□□□□ -1.76
XRCC6-208ENST00000478914 C5orf47Q569G3 176 aa4.06□□□□□ -1.76
XRCC6-208ENST00000478914 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
XRCC6-208ENST00000478914 TP53AIP1Q9HCN2 124 aa4.05□□□□□ -1.76
XRCC6-208ENST00000478914 PRO0461Q9UI25 63 aa4.05□□□□□ -1.76
XRCC6-208ENST00000478914 S4R3F8 94 aa4.05□□□□□ -1.76
XRCC6-208ENST00000478914 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
XRCC6-208ENST00000478914 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
XRCC6-208ENST00000478914 C1orf64Q8NEQ6 169 aa4.04□□□□□ -1.76
XRCC6-208ENST00000478914 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms