RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 A8MWP4 228 aa3.74□□□□□ -1.81
TRA2B-211ENST00000477939 KRTAP10-1P60331 282 aa3.74□□□□□ -1.81
TRA2B-211ENST00000477939 Q5VSD8 79 aa3.74□□□□□ -1.81
TRA2B-211ENST00000477939 SMIM29Q86T20 159 aa3.74□□□□□ -1.81
TRA2B-211ENST00000477939 SRRM2Q9UQ35 2752 aaKnown RBP3.74□□□□□ -1.81
TRA2B-211ENST00000477939 SPINK7P58062 85 aa3.73□□□□□ -1.81
TRA2B-211ENST00000477939 LINC00158P58513 81 aa3.73□□□□□ -1.81
TRA2B-211ENST00000477939 KRTAP25-1Q3LHN0 102 aa3.73□□□□□ -1.81
TRA2B-211ENST00000477939 LINC00575Q6W349 94 aa3.73□□□□□ -1.81
TRA2B-211ENST00000477939 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
TRA2B-211ENST00000477939 PLA2G2DQ9UNK4 145 aa3.73□□□□□ -1.81
TRA2B-211ENST00000477939 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
TRA2B-211ENST00000477939 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
TRA2B-211ENST00000477939 M0QY20 66 aa3.72□□□□□ -1.81
TRA2B-211ENST00000477939 CDKN2A-AS1Q9UH64 79 aa3.72□□□□□ -1.81
TRA2B-211ENST00000477939 SMIM1B2RUZ4 78 aa3.71□□□□□ -1.82
TRA2B-211ENST00000477939 LINC00483Q53H64 154 aa3.71□□□□□ -1.82
TRA2B-211ENST00000477939 C20orf166-AS1Q96NR2 134 aa3.71□□□□□ -1.82
TRA2B-211ENST00000477939 SMR3BP02814 79 aaPredicted RBP3.7□□□□□ -1.82
TRA2B-211ENST00000477939 LINC01556Q5JQF7 62 aa3.7□□□□□ -1.82
TRA2B-211ENST00000477939 C10orf25Q5T742 122 aa3.7□□□□□ -1.82
TRA2B-211ENST00000477939 SPRR4Q96PI1 79 aa3.7□□□□□ -1.82
TRA2B-211ENST00000477939 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
TRA2B-211ENST00000477939 IGLV5-37A0A075B6J1 123 aa3.69□□□□□ -1.82
TRA2B-211ENST00000477939 IGLV5-52A0A0A0MRZ9 124 aa3.69□□□□□ -1.82
TRA2B-211ENST00000477939 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
TRA2B-211ENST00000477939 C7orf33Q8WU49 177 aa3.69□□□□□ -1.82
TRA2B-211ENST00000477939 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
TRA2B-211ENST00000477939 RNASE3P12724 160 aaKnown RBP3.68□□□□□ -1.82
TRA2B-211ENST00000477939 COX17Q14061 63 aa3.68□□□□□ -1.82
TRA2B-211ENST00000477939 Q6ZQY7 126 aa3.68□□□□□ -1.82
TRA2B-211ENST00000477939 Q6ZSN1 163 aa3.68□□□□□ -1.82
TRA2B-211ENST00000477939 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
TRA2B-211ENST00000477939 LELP1Q5T871 98 aa3.67□□□□□ -1.82
TRA2B-211ENST00000477939 Q6ZSA8 131 aa3.67□□□□□ -1.82
TRA2B-211ENST00000477939 RPL37AP8A6NKH3 93 aa3.66□□□□□ -1.82
TRA2B-211ENST00000477939 FAM229AH3BQW9 127 aa3.66□□□□□ -1.82
TRA2B-211ENST00000477939 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.82
TRA2B-211ENST00000477939 LINC00959A0A1B0GUT2 108 aa3.65□□□□□ -1.83
TRA2B-211ENST00000477939 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
TRA2B-211ENST00000477939 P0C880 135 aa3.64□□□□□ -1.83
TRA2B-211ENST00000477939 ZNF861PO60384 105 aa3.63□□□□□ -1.83
TRA2B-211ENST00000477939 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
TRA2B-211ENST00000477939 KRTAP26-1Q6PEX3 210 aa3.63□□□□□ -1.83
TRA2B-211ENST00000477939 Q8IZM0 81 aa3.63□□□□□ -1.83
TRA2B-211ENST00000477939 ST20-AS1Q8NBB2 130 aa3.63□□□□□ -1.83
TRA2B-211ENST00000477939 PKHD1L1Q86WI1 4243 aa3.62□□□□□ -1.83
TRA2B-211ENST00000477939 KRTAP29-1A8MX34 341 aaPredicted RBP3.62□□□□□ -1.83
TRA2B-211ENST00000477939 Q8N9L7 120 aa3.62□□□□□ -1.83
TRA2B-211ENST00000477939 IGKV2D-24A0A075B6R9 120 aa3.61□□□□□ -1.83
TRA2B-211ENST00000477939 A0A1B0GU69 56 aa3.61□□□□□ -1.83
TRA2B-211ENST00000477939 TLX1NBP0CAT3 122 aa3.61□□□□□ -1.83
TRA2B-211ENST00000477939 DEFB104AQ8WTQ1 72 aa3.61□□□□□ -1.83
TRA2B-211ENST00000477939 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
TRA2B-211ENST00000477939 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
TRA2B-211ENST00000477939 A0A1B0GVX0 72 aa3.6□□□□□ -1.83
TRA2B-211ENST00000477939 CIRBP-AS1Q8TBR5 109 aa3.6□□□□□ -1.83
TRA2B-211ENST00000477939 DHRS4-AS1Q9P1J3 65 aa3.6□□□□□ -1.83
TRA2B-211ENST00000477939 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
TRA2B-211ENST00000477939 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
TRA2B-211ENST00000477939 COX6A2Q02221 97 aa3.59□□□□□ -1.83
TRA2B-211ENST00000477939 Q5W150 140 aa3.59□□□□□ -1.83
TRA2B-211ENST00000477939 IGLV5-48A0A075B6I7 105 aa3.57□□□□□ -1.84
TRA2B-211ENST00000477939 IGKV3OR2-268A0A0C4DH90 116 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 A8MUU9 505 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 PANO1I0J062 215 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 IGLV6-57P01721 117 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 ANGP03950 147 aaKnown RBP3.56□□□□□ -1.84
TRA2B-211ENST00000477939 ACYP2P14621 99 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 RPL37AP61513 92 aaKnown RBP3.56□□□□□ -1.84
TRA2B-211ENST00000477939 C14orf177Q52M58 125 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 CLPSL2Q6UWE3 100 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 TOMM7Q9P0U1 55 aa3.56□□□□□ -1.84
TRA2B-211ENST00000477939 TNXBP22105 4242 aa3.55□□□□□ -1.84
TRA2B-211ENST00000477939 LRP2P98164 4655 aa3.55□□□□□ -1.84
TRA2B-211ENST00000477939 DSCR10P59022 87 aa3.55□□□□□ -1.84
TRA2B-211ENST00000477939 HRES1P13985 223 aa3.54□□□□□ -1.84
TRA2B-211ENST00000477939 Q8NBF4 154 aa3.54□□□□□ -1.84
TRA2B-211ENST00000477939 K7EQZ3 153 aa3.53□□□□□ -1.84
TRA2B-211ENST00000477939 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
TRA2B-211ENST00000477939 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
TRA2B-211ENST00000477939 SPACA4Q8TDM5 124 aa3.51□□□□□ -1.85
TRA2B-211ENST00000477939 A0A1B0GUV1 79 aa3.5□□□□□ -1.85
TRA2B-211ENST00000477939 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
TRA2B-211ENST00000477939 IGLV7-43P04211 117 aa3.5□□□□□ -1.85
TRA2B-211ENST00000477939 LINC00472Q9H8W2 130 aa3.5□□□□□ -1.85
TRA2B-211ENST00000477939 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
TRA2B-211ENST00000477939 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
TRA2B-211ENST00000477939 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
TRA2B-211ENST00000477939 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
TRA2B-211ENST00000477939 A0A096LNI7 61 aa3.46□□□□□ -1.86
TRA2B-211ENST00000477939 GVQW2A0A096LPI5 108 aaPredicted RBP3.46□□□□□ -1.86
TRA2B-211ENST00000477939 IGKV2-24A0A0C4DH68 120 aa3.46□□□□□ -1.86
TRA2B-211ENST00000477939 C6orf48Q9UBA6 75 aa3.45□□□□□ -1.86
TRA2B-211ENST00000477939 A0A1B0GU33 70 aa3.44□□□□□ -1.86
TRA2B-211ENST00000477939 LPAP08519 4548 aa3.43□□□□□ -1.86
TRA2B-211ENST00000477939 PCOTHQ58A44 107 aa3.43□□□□□ -1.86
TRA2B-211ENST00000477939 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
TRA2B-211ENST00000477939 SPINK6Q6UWN8 80 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms