RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
LRCH3-215ENST00000476664 CRYM-AS1A6NIL9 109 aa3.13□□□□□ -1.91
LRCH3-215ENST00000476664 C3orf79P0CE67 100 aa3.13□□□□□ -1.91
LRCH3-215ENST00000476664 UNQ6190/PRO20217Q6UXQ8 127 aa3.13□□□□□ -1.91
LRCH3-215ENST00000476664 C20orf197Q8N268 126 aa3.13□□□□□ -1.91
LRCH3-215ENST00000476664 SMIM4Q8WVI0 70 aa3.13□□□□□ -1.91
LRCH3-215ENST00000476664 MGST2Q99735 147 aa3.13□□□□□ -1.91
LRCH3-215ENST00000476664 TRBV7-3A0A075B6L6 115 aa3.12□□□□□ -1.91
LRCH3-215ENST00000476664 NDUFC1O43677 76 aa3.12□□□□□ -1.91
LRCH3-215ENST00000476664 FXYD4P59646 89 aa3.12□□□□□ -1.91
LRCH3-215ENST00000476664 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
LRCH3-215ENST00000476664 TTTY10Q9BZA0 68 aa3.12□□□□□ -1.91
LRCH3-215ENST00000476664 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
LRCH3-215ENST00000476664 IGKV3OR2-268A0A0C4DH90 116 aa3.11□□□□□ -1.91
LRCH3-215ENST00000476664 FAM74A4Q5TZK3 123 aa3.11□□□□□ -1.91
LRCH3-215ENST00000476664 CFAP126Q5VTH2 177 aa3.11□□□□□ -1.91
LRCH3-215ENST00000476664 SPINK6Q6UWN8 80 aa3.11□□□□□ -1.91
LRCH3-215ENST00000476664 ELOF1P60002 83 aaKnown RBP3.1□□□□□ -1.91
LRCH3-215ENST00000476664 DEFB1P60022 68 aa3.1□□□□□ -1.91
LRCH3-215ENST00000476664 ZNF56Q15929 161 aa3.1□□□□□ -1.91
LRCH3-215ENST00000476664 FAM213BQ8TBF2 198 aa3.1□□□□□ -1.91
LRCH3-215ENST00000476664 R4GMQ9 66 aa3.1□□□□□ -1.91
LRCH3-215ENST00000476664 IGKV2-40A0A087WW87 121 aaPredicted RBP3.09□□□□□ -1.91
LRCH3-215ENST00000476664 IGKV2-29A2NJV5 120 aaPredicted RBP3.09□□□□□ -1.91
LRCH3-215ENST00000476664 IGKV2D-40P01614 121 aaPredicted RBP3.09□□□□□ -1.91
LRCH3-215ENST00000476664 COX8AP10176 69 aa3.09□□□□□ -1.91
LRCH3-215ENST00000476664 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
LRCH3-215ENST00000476664 COX7B2Q8TF08 81 aa3.09□□□□□ -1.91
LRCH3-215ENST00000476664 FAM167A-AS1Q96KT0 104 aa3.09□□□□□ -1.91
LRCH3-215ENST00000476664 KMT2DO14686 5537 aa3.09□□□□□ -1.92
LRCH3-215ENST00000476664 NOP10Q9NPE3 64 aaKnown RBP3.08□□□□□ -1.92
LRCH3-215ENST00000476664 TIMM8BQ9Y5J9 83 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-215ENST00000476664 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
LRCH3-215ENST00000476664 SMIM13P0DJ93 91 aa3.07□□□□□ -1.92
LRCH3-215ENST00000476664 FAUP35544 74 aaKnown RBP3.07□□□□□ -1.92
LRCH3-215ENST00000476664 TMEM167AQ8TBQ9 72 aa3.07□□□□□ -1.92
LRCH3-215ENST00000476664 TRGV9Q99603 122 aa3.07□□□□□ -1.92
LRCH3-215ENST00000476664 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
LRCH3-215ENST00000476664 LENEPQ9Y5L5 61 aa3.07□□□□□ -1.92
LRCH3-215ENST00000476664 F2Z2F3 143 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 KRTAP19-2Q3LHN2 52 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 NMES1Q9C002 83 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 CMC2Q9NRP2 79 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 ABRACLQ9P1F3 81 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 PRO1854Q9UHT4 67 aa3.06□□□□□ -1.92
LRCH3-215ENST00000476664 SNRPGP62308 76 aaKnown RBP3.05□□□□□ -1.92
LRCH3-215ENST00000476664 OBSCN-AS1Q96MR7 158 aa3.05□□□□□ -1.92
LRCH3-215ENST00000476664 HIGD1BQ9P298 99 aa3.05□□□□□ -1.92
LRCH3-215ENST00000476664 TMEM14DPA8MWL7 114 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 M0R2T5 61 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 COX6CP09669 75 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 PCOTHQ58A44 107 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 LINC01556Q5JQF7 62 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 BAGE3Q86Y29 109 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 BAGE2Q86Y30 109 aa3.04□□□□□ -1.92
LRCH3-215ENST00000476664 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
LRCH3-215ENST00000476664 K7EIM0 57 aa3.03□□□□□ -1.92
LRCH3-215ENST00000476664 HTN1P15515 57 aa3.03□□□□□ -1.92
LRCH3-215ENST00000476664 UBE2D3P61077 147 aa3.03□□□□□ -1.92
LRCH3-215ENST00000476664 UBE2D2P62837 147 aa3.03□□□□□ -1.92
LRCH3-215ENST00000476664 Q6ZQY7 126 aa3.03□□□□□ -1.92
LRCH3-215ENST00000476664 V9GYV3 84 aa3.03□□□□□ -1.92
LRCH3-215ENST00000476664 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
LRCH3-215ENST00000476664 PPP1R17O96001 155 aa3.02□□□□□ -1.93
LRCH3-215ENST00000476664 TRAV22A0A0B4J277 110 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 KLKP1Q107X0 134 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 SPINK13Q1W4C9 94 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 Q86TA4 180 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 TMEM263Q8WUH6 116 aaKnown RBP3.01□□□□□ -1.93
LRCH3-215ENST00000476664 LINC00208Q96KT6 92 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 NDUFA4L2Q9NRX3 87 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 ARL2-SNX15V9GYD0 113 aa3.01□□□□□ -1.93
LRCH3-215ENST00000476664 TRAV1-2A0A0B4J238 106 aa3□□□□□ -1.93
LRCH3-215ENST00000476664 SMIM11AP58511 58 aa3□□□□□ -1.93
LRCH3-215ENST00000476664 KRTAP10-10P60014 251 aa3□□□□□ -1.93
LRCH3-215ENST00000476664 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
LRCH3-215ENST00000476664 Q5VV11 94 aa3□□□□□ -1.93
LRCH3-215ENST00000476664 ZCCHC13Q8WW36 166 aaKnown RBP3□□□□□ -1.93
LRCH3-215ENST00000476664 A8MTW9 85 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 WT1-ASQ06250 92 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 SPAG11BQ08648 103 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 SPAG11AQ6PDA7 123 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 LINC00846Q9NV44 126 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 PLAC8Q9NZF1 115 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 PRO0255Q9UI72 69 aa2.99□□□□□ -1.93
LRCH3-215ENST00000476664 NXT2Q9NPJ8 142 aaKnown RBP2.98□□□□□ -1.93
LRCH3-215ENST00000476664 CDC42SE2Q9NRR3 84 aa2.98□□□□□ -1.93
LRCH3-215ENST00000476664 I3L2K1 104 aa2.97□□□□□ -1.93
LRCH3-215ENST00000476664 GCHFRP30047 84 aa2.97□□□□□ -1.93
LRCH3-215ENST00000476664 PRCDQ00LT1 54 aa2.97□□□□□ -1.93
LRCH3-215ENST00000476664 SPINK9Q5DT21 86 aa2.97□□□□□ -1.93
LRCH3-215ENST00000476664 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
LRCH3-215ENST00000476664 TMEM170BQ5T4T1 132 aa2.96□□□□□ -1.94
LRCH3-215ENST00000476664 LINC00643Q86TS7 51 aa2.96□□□□□ -1.94
LRCH3-215ENST00000476664 H7BZZ5 65 aa2.95□□□□□ -1.94
LRCH3-215ENST00000476664 KRTAP19-6Q3LI70 58 aa2.95□□□□□ -1.94
LRCH3-215ENST00000476664 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
LRCH3-215ENST00000476664 AMELXQ99217 191 aa2.95□□□□□ -1.94
LRCH3-215ENST00000476664 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms