RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 NOTCH2NLQ7Z3S9 236 aa5.63□□□□□ -1.51
CASC3-204ENST00000474190 LINC00846Q9NV44 126 aa5.63□□□□□ -1.51
CASC3-204ENST00000474190 C9orf92A6NGG3 77 aa5.62□□□□□ -1.51
CASC3-204ENST00000474190 KRTAP16-1A8MUX0 517 aa5.6□□□□□ -1.51
CASC3-204ENST00000474190 IGKV4-1P06312 121 aa5.6□□□□□ -1.51
CASC3-204ENST00000474190 DSCR10P59022 87 aa5.6□□□□□ -1.51
CASC3-204ENST00000474190 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
CASC3-204ENST00000474190 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.51
CASC3-204ENST00000474190 Q6ZVQ6 151 aa5.59□□□□□ -1.51
CASC3-204ENST00000474190 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
CASC3-204ENST00000474190 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
CASC3-204ENST00000474190 KRTAP4-1Q9BYQ7 146 aa5.58□□□□□ -1.52
CASC3-204ENST00000474190 CDIP1Q9H305 208 aa5.58□□□□□ -1.52
CASC3-204ENST00000474190 NREPQ16612 68 aa5.57□□□□□ -1.52
CASC3-204ENST00000474190 SIGMAR1Q99720 223 aa5.57□□□□□ -1.52
CASC3-204ENST00000474190 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
CASC3-204ENST00000474190 A8MWP4 228 aa5.55□□□□□ -1.52
CASC3-204ENST00000474190 J3KT08 172 aa5.55□□□□□ -1.52
CASC3-204ENST00000474190 A0A0U1RQV1 116 aa5.54□□□□□ -1.52
CASC3-204ENST00000474190 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
CASC3-204ENST00000474190 IGHV6-1A0A0B4J1U7 121 aa5.53□□□□□ -1.52
CASC3-204ENST00000474190 FAM240AA0A1B0GVK7 77 aa5.53□□□□□ -1.52
CASC3-204ENST00000474190 A8MUU9 505 aa5.53□□□□□ -1.52
CASC3-204ENST00000474190 K7EQZ3 153 aa5.53□□□□□ -1.52
CASC3-204ENST00000474190 RPL37P61927 97 aaKnown RBP5.53□□□□□ -1.52
CASC3-204ENST00000474190 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
CASC3-204ENST00000474190 Q8N9L7 120 aa5.52□□□□□ -1.53
CASC3-204ENST00000474190 LINC00313P59037 77 aa5.51□□□□□ -1.53
CASC3-204ENST00000474190 Q75L30 129 aa5.51□□□□□ -1.53
CASC3-204ENST00000474190 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
CASC3-204ENST00000474190 C8orf17Q9NRJ1 99 aa5.5□□□□□ -1.53
CASC3-204ENST00000474190 BPY2O14599 106 aa5.49□□□□□ -1.53
CASC3-204ENST00000474190 PCOTHQ58A44 107 aa5.49□□□□□ -1.53
CASC3-204ENST00000474190 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
CASC3-204ENST00000474190 C8orf87E5RJ46 101 aa5.48□□□□□ -1.53
CASC3-204ENST00000474190 ACYP1P07311 99 aa5.48□□□□□ -1.53
CASC3-204ENST00000474190 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
CASC3-204ENST00000474190 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
CASC3-204ENST00000474190 NDUFB1O75438 58 aa5.45□□□□□ -1.54
CASC3-204ENST00000474190 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
CASC3-204ENST00000474190 CXCL6P80162 114 aa5.45□□□□□ -1.54
CASC3-204ENST00000474190 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
CASC3-204ENST00000474190 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
CASC3-204ENST00000474190 hDV103S1A0JD37 113 aa5.4□□□□□ -1.54
CASC3-204ENST00000474190 LINC00643Q86TS7 51 aa5.4□□□□□ -1.54
CASC3-204ENST00000474190 MRPL34Q9BQ48 92 aaKnown RBP5.4□□□□□ -1.54
CASC3-204ENST00000474190 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
CASC3-204ENST00000474190 WFDC13Q8IUB5 93 aa5.38□□□□□ -1.55
CASC3-204ENST00000474190 HCG22E2RYF7 251 aa5.37□□□□□ -1.55
CASC3-204ENST00000474190 ATP5EP2Q5VTU8 51 aa5.37□□□□□ -1.55
CASC3-204ENST00000474190 Q5W150 140 aa5.37□□□□□ -1.55
CASC3-204ENST00000474190 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
CASC3-204ENST00000474190 J3QR89 54 aa5.36□□□□□ -1.55
CASC3-204ENST00000474190 CASC2Q6XLA1 102 aa5.36□□□□□ -1.55
CASC3-204ENST00000474190 ZCCHC13Q8WW36 166 aaKnown RBP5.36□□□□□ -1.55
CASC3-204ENST00000474190 A0A087WVE0 104 aa5.34□□□□□ -1.55
CASC3-204ENST00000474190 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
CASC3-204ENST00000474190 K7ERU9 68 aa5.32□□□□□ -1.56
CASC3-204ENST00000474190 MT-ATP8P03928 68 aa5.31□□□□□ -1.56
CASC3-204ENST00000474190 HRES1P13985 223 aa5.31□□□□□ -1.56
CASC3-204ENST00000474190 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
CASC3-204ENST00000474190 SPINK7P58062 85 aa5.27□□□□□ -1.57
CASC3-204ENST00000474190 NDUFS5O43920 106 aa5.26□□□□□ -1.57
CASC3-204ENST00000474190 MT1HP80294 61 aa5.23□□□□□ -1.57
CASC3-204ENST00000474190 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
CASC3-204ENST00000474190 IMUPQ9GZP8 106 aa5.22□□□□□ -1.57
CASC3-204ENST00000474190 TP53AIP1Q9HCN2 124 aa5.22□□□□□ -1.57
CASC3-204ENST00000474190 IGKV2-30P06310 120 aa5.2□□□□□ -1.58
CASC3-204ENST00000474190 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
CASC3-204ENST00000474190 H3BS24 57 aa5.19□□□□□ -1.58
CASC3-204ENST00000474190 IGKV2D-30A0A075B6S6 120 aa5.17□□□□□ -1.58
CASC3-204ENST00000474190 UQCRQO14949 82 aa5.17□□□□□ -1.58
CASC3-204ENST00000474190 C7orf65Q6ZTY9 151 aa5.16□□□□□ -1.58
CASC3-204ENST00000474190 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
CASC3-204ENST00000474190 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.59
CASC3-204ENST00000474190 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.14□□□□□ -1.59
CASC3-204ENST00000474190 CYP4F30PQ9H0H9 118 aa5.14□□□□□ -1.59
CASC3-204ENST00000474190 FAM236AA0A1B0GUQ0 79 aa5.13□□□□□ -1.59
CASC3-204ENST00000474190 FAM236BA0A1B0GV22 79 aa5.13□□□□□ -1.59
CASC3-204ENST00000474190 H0Y9P7 68 aa5.11□□□□□ -1.59
CASC3-204ENST00000474190 C4orf26Q17RF5 130 aa5.1□□□□□ -1.59
CASC3-204ENST00000474190 COX6B2Q6YFQ2 88 aa5.1□□□□□ -1.59
CASC3-204ENST00000474190 LOC101927531A0A1B0GV80 90 aa5.09□□□□□ -1.59
CASC3-204ENST00000474190 RBM12B-AS1Q9P1G2 102 aa5.09□□□□□ -1.59
CASC3-204ENST00000474190 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
CASC3-204ENST00000474190 ATOX1O00244 68 aa5.07□□□□□ -1.6
CASC3-204ENST00000474190 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
CASC3-204ENST00000474190 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
CASC3-204ENST00000474190 SCGB1A1P11684 91 aa5.06□□□□□ -1.6
CASC3-204ENST00000474190 C1orf64Q8NEQ6 169 aa5.06□□□□□ -1.6
CASC3-204ENST00000474190 LINC00208Q96KT6 92 aa5.06□□□□□ -1.6
CASC3-204ENST00000474190 SSPOA2VEC9 5147 aa5.05□□□□□ -1.6
CASC3-204ENST00000474190 TRAV7A0A075B6U4 112 aa5.05□□□□□ -1.6
CASC3-204ENST00000474190 USH2AO75445 5202 aa5.05□□□□□ -1.6
CASC3-204ENST00000474190 FAM236DA0A1B0GTK5 79 aa5.03□□□□□ -1.6
CASC3-204ENST00000474190 FAM236CP0DP71 79 aa5.03□□□□□ -1.6
CASC3-204ENST00000474190 H1FX-AS1Q4G0G2 97 aa5.03□□□□□ -1.6
CASC3-204ENST00000474190 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
CASC3-204ENST00000474190 H3BPC8 53 aa5.02□□□□□ -1.61
CASC3-204ENST00000474190 MP68P56378 58 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms