RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
CCM2-205ENST00000472223 LINC00313P59037 77 aa9.32□□□□□ -0.92
CCM2-205ENST00000472223 K7ERU9 68 aa9.31□□□□□ -0.92
CCM2-205ENST00000472223 C8orf87E5RJ46 101 aa9.3□□□□□ -0.92
CCM2-205ENST00000472223 DSCR10P59022 87 aa9.27□□□□□ -0.93
CCM2-205ENST00000472223 CXCL6P80162 114 aa9.27□□□□□ -0.93
CCM2-205ENST00000472223 HMCN2Q8NDA2 5059 aa9.27□□□□□ -0.93
CCM2-205ENST00000472223 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
CCM2-205ENST00000472223 PRR15Q8IV56 129 aa9.26□□□□□ -0.93
CCM2-205ENST00000472223 ATP5EP2Q5VTU8 51 aa9.25□□□□□ -0.93
CCM2-205ENST00000472223 K7EQZ3 153 aa9.23□□□□□ -0.93
CCM2-205ENST00000472223 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
CCM2-205ENST00000472223 XP32Q5T750 250 aa9.22□□□□□ -0.93
CCM2-205ENST00000472223 C8orf17Q9NRJ1 99 aa9.21□□□□□ -0.94
CCM2-205ENST00000472223 LPAP08519 4548 aa9.18□□□□□ -0.94
CCM2-205ENST00000472223 Q8N9L7 120 aa9.18□□□□□ -0.94
CCM2-205ENST00000472223 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
CCM2-205ENST00000472223 NOTCH2NLQ7Z3S9 236 aa9.16□□□□□ -0.94
CCM2-205ENST00000472223 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
CCM2-205ENST00000472223 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
CCM2-205ENST00000472223 Q75L30 129 aa9.14□□□□□ -0.95
CCM2-205ENST00000472223 RPL37P61927 97 aaKnown RBP9.13□□□□□ -0.95
CCM2-205ENST00000472223 CASC2Q6XLA1 102 aa9.13□□□□□ -0.95
CCM2-205ENST00000472223 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
CCM2-205ENST00000472223 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
CCM2-205ENST00000472223 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
CCM2-205ENST00000472223 HCG22E2RYF7 251 aa9.11□□□□□ -0.95
CCM2-205ENST00000472223 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
CCM2-205ENST00000472223 C20orf166-AS1Q96NR2 134 aa9.11□□□□□ -0.95
CCM2-205ENST00000472223 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
CCM2-205ENST00000472223 LRP2P98164 4655 aa9.1□□□□□ -0.95
CCM2-205ENST00000472223 A8MUU9 505 aa9.1□□□□□ -0.95
CCM2-205ENST00000472223 KRTAP16-1A8MUX0 517 aa9.1□□□□□ -0.95
CCM2-205ENST00000472223 NDUFS5O43920 106 aa9.08□□□□□ -0.96
CCM2-205ENST00000472223 Q8N9P0 234 aaPredicted RBP9.05□□□□□ -0.96
CCM2-205ENST00000472223 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
CCM2-205ENST00000472223 IMUPQ9GZP8 106 aa8.99□□□□□ -0.97
CCM2-205ENST00000472223 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
CCM2-205ENST00000472223 A0A087WVE0 104 aa8.96□□□□□ -0.98
CCM2-205ENST00000472223 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
CCM2-205ENST00000472223 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
CCM2-205ENST00000472223 SCGB1A1P11684 91 aa8.92□□□□□ -0.98
CCM2-205ENST00000472223 UBR4Q5T4S7 5183 aa8.92□□□□□ -0.98
CCM2-205ENST00000472223 MUC17Q685J3 4493 aa8.91□□□□□ -0.98
CCM2-205ENST00000472223 UQCRQO14949 82 aa8.83□□□□□ -1
CCM2-205ENST00000472223 A0A0U1RQV1 116 aa8.8□□□□□ -1
CCM2-205ENST00000472223 Q5W150 140 aa8.8□□□□□ -1
CCM2-205ENST00000472223 RNF213Q63HN8 5207 aa8.79□□□□□ -1
CCM2-205ENST00000472223 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
CCM2-205ENST00000472223 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
CCM2-205ENST00000472223 SPINK7P58062 85 aa8.79□□□□□ -1
CCM2-205ENST00000472223 TRAV22A0A0B4J277 110 aa8.78□□□□□ -1
CCM2-205ENST00000472223 SMIM20Q8N5G0 67 aa8.78□□□□□ -1
CCM2-205ENST00000472223 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
CCM2-205ENST00000472223 IGKV2D-30A0A075B6S6 120 aa8.76□□□□□ -1.01
CCM2-205ENST00000472223 ATOX1O00244 68 aa8.76□□□□□ -1.01
CCM2-205ENST00000472223 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
CCM2-205ENST00000472223 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
CCM2-205ENST00000472223 MP68P56378 58 aa8.74□□□□□ -1.01
CCM2-205ENST00000472223 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
CCM2-205ENST00000472223 H0Y9P7 68 aa8.73□□□□□ -1.01
CCM2-205ENST00000472223 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
CCM2-205ENST00000472223 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
CCM2-205ENST00000472223 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
CCM2-205ENST00000472223 MUC2Q02817 5179 aa8.7□□□□□ -1.02
CCM2-205ENST00000472223 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
CCM2-205ENST00000472223 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
CCM2-205ENST00000472223 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
CCM2-205ENST00000472223 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
CCM2-205ENST00000472223 C1orf64Q8NEQ6 169 aa8.65□□□□□ -1.02
CCM2-205ENST00000472223 H3BPC8 53 aa8.64□□□□□ -1.03
CCM2-205ENST00000472223 LINC00208Q96KT6 92 aa8.64□□□□□ -1.03
CCM2-205ENST00000472223 HRES1P13985 223 aa8.63□□□□□ -1.03
CCM2-205ENST00000472223 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
CCM2-205ENST00000472223 SERP2Q8N6R1 65 aa8.58□□□□□ -1.04
CCM2-205ENST00000472223 MPLKIPQ8TAP9 179 aa8.54□□□□□ -1.04
CCM2-205ENST00000472223 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
CCM2-205ENST00000472223 ANAPC13Q9BS18 74 aa8.48□□□□□ -1.05
CCM2-205ENST00000472223 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
CCM2-205ENST00000472223 COX7CP15954 63 aa8.46□□□□□ -1.06
CCM2-205ENST00000472223 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
CCM2-205ENST00000472223 C20orf197Q8N268 126 aa8.45□□□□□ -1.06
CCM2-205ENST00000472223 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
CCM2-205ENST00000472223 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
CCM2-205ENST00000472223 FAT4Q6V0I7 4981 aa8.43□□□□□ -1.06
CCM2-205ENST00000472223 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
CCM2-205ENST00000472223 M0R2T5 61 aa8.42□□□□□ -1.06
CCM2-205ENST00000472223 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
CCM2-205ENST00000472223 A8MUN3 132 aa8.36□□□□□ -1.07
CCM2-205ENST00000472223 MT1HP80294 61 aa8.36□□□□□ -1.07
CCM2-205ENST00000472223 NDUFC1O43677 76 aa8.32□□□□□ -1.08
CCM2-205ENST00000472223 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
CCM2-205ENST00000472223 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
CCM2-205ENST00000472223 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
CCM2-205ENST00000472223 S4R3F8 94 aa8.29□□□□□ -1.08
CCM2-205ENST00000472223 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
CCM2-205ENST00000472223 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
CCM2-205ENST00000472223 SPANXA2-OT1Q8N9U9 137 aa8.25□□□□□ -1.09
CCM2-205ENST00000472223 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
CCM2-205ENST00000472223 ACYP2P14621 99 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms