RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NREPQ16612 68 aa7.75□□□□□ -1.17
HMGN1-211ENST00000471260 LINC00483Q53H64 154 aa7.75□□□□□ -1.17
HMGN1-211ENST00000471260 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-211ENST00000471260 FP248Q71RG6 208 aaPredicted RBP7.73□□□□□ -1.17
HMGN1-211ENST00000471260 Q8NBF4 154 aa7.73□□□□□ -1.17
HMGN1-211ENST00000471260 Q9BRP9 147 aa7.73□□□□□ -1.17
HMGN1-211ENST00000471260 MUC2Q02817 5179 aa7.72□□□□□ -1.17
HMGN1-211ENST00000471260 SPINK1P00995 79 aa7.72□□□□□ -1.17
HMGN1-211ENST00000471260 BPY2O14599 106 aa7.71□□□□□ -1.18
HMGN1-211ENST00000471260 IGKV4-1P06312 121 aa7.71□□□□□ -1.18
HMGN1-211ENST00000471260 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
HMGN1-211ENST00000471260 C20orf197Q8N268 126 aa7.71□□□□□ -1.18
HMGN1-211ENST00000471260 CYSTM1Q9H1C7 97 aa7.7□□□□□ -1.18
HMGN1-211ENST00000471260 FAM236DA0A1B0GTK5 79 aa7.69□□□□□ -1.18
HMGN1-211ENST00000471260 F8WEM9 126 aa7.69□□□□□ -1.18
HMGN1-211ENST00000471260 FAM236CP0DP71 79 aa7.69□□□□□ -1.18
HMGN1-211ENST00000471260 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
HMGN1-211ENST00000471260 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
HMGN1-211ENST00000471260 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
HMGN1-211ENST00000471260 H7BZZ5 65 aa7.66□□□□□ -1.18
HMGN1-211ENST00000471260 DEFB105AQ8NG35 78 aa7.66□□□□□ -1.18
HMGN1-211ENST00000471260 IGLV9-49A0A0B4J1Y8 123 aa7.65□□□□□ -1.18
HMGN1-211ENST00000471260 MOBPQ13875 183 aa7.65□□□□□ -1.18
HMGN1-211ENST00000471260 SERP1Q9Y6X1 66 aa7.64□□□□□ -1.19
HMGN1-211ENST00000471260 OCR1Q9BZK8 76 aa7.63□□□□□ -1.19
HMGN1-211ENST00000471260 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
HMGN1-211ENST00000471260 SPRR1BP22528 89 aa7.62□□□□□ -1.19
HMGN1-211ENST00000471260 SMIM29Q86T20 159 aa7.62□□□□□ -1.19
HMGN1-211ENST00000471260 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
HMGN1-211ENST00000471260 ST20-AS1Q8NBB2 130 aa7.61□□□□□ -1.19
HMGN1-211ENST00000471260 TMEM254Q8TBM7 123 aa7.61□□□□□ -1.19
HMGN1-211ENST00000471260 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
HMGN1-211ENST00000471260 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
HMGN1-211ENST00000471260 Q8N9L7 120 aa7.55□□□□□ -1.2
HMGN1-211ENST00000471260 DSCR10P59022 87 aa7.54□□□□□ -1.2
HMGN1-211ENST00000471260 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-211ENST00000471260 SNURFQ9Y675 71 aa7.54□□□□□ -1.2
HMGN1-211ENST00000471260 HCG22E2RYF7 251 aa7.52□□□□□ -1.21
HMGN1-211ENST00000471260 SEC61BP60468 96 aaKnown RBP7.52□□□□□ -1.21
HMGN1-211ENST00000471260 LIMD2Q9BT23 127 aa7.52□□□□□ -1.21
HMGN1-211ENST00000471260 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
HMGN1-211ENST00000471260 SMIM26A0A096LP01 95 aa7.49□□□□□ -1.21
HMGN1-211ENST00000471260 K7EQZ3 153 aa7.49□□□□□ -1.21
HMGN1-211ENST00000471260 CD164Q04900 197 aa7.49□□□□□ -1.21
HMGN1-211ENST00000471260 C5orf47Q569G3 176 aa7.49□□□□□ -1.21
HMGN1-211ENST00000471260 XP32Q5T750 250 aa7.48□□□□□ -1.21
HMGN1-211ENST00000471260 A0A087WSZ3 146 aa7.46□□□□□ -1.22
HMGN1-211ENST00000471260 H3BPC8 53 aa7.46□□□□□ -1.22
HMGN1-211ENST00000471260 Q5XG85 94 aa7.46□□□□□ -1.22
HMGN1-211ENST00000471260 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.22
HMGN1-211ENST00000471260 NDUFB1O75438 58 aa7.45□□□□□ -1.22
HMGN1-211ENST00000471260 HRCT1Q6UXD1 115 aa7.45□□□□□ -1.22
HMGN1-211ENST00000471260 A8MWP4 228 aa7.43□□□□□ -1.22
HMGN1-211ENST00000471260 MP68P56378 58 aa7.41□□□□□ -1.22
HMGN1-211ENST00000471260 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
HMGN1-211ENST00000471260 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.22
HMGN1-211ENST00000471260 LINC00472Q9H8W2 130 aa7.4□□□□□ -1.22
HMGN1-211ENST00000471260 KRTAP9-2Q9BYQ4 174 aa7.39□□□□□ -1.23
HMGN1-211ENST00000471260 CYP4F30PQ9H0H9 118 aa7.39□□□□□ -1.23
HMGN1-211ENST00000471260 CASC2Q6XLA1 102 aa7.37□□□□□ -1.23
HMGN1-211ENST00000471260 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
HMGN1-211ENST00000471260 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
HMGN1-211ENST00000471260 C1orf195Q5TG92 126 aa7.35□□□□□ -1.23
HMGN1-211ENST00000471260 SPANXA2-OT1Q8N9U9 137 aa7.35□□□□□ -1.23
HMGN1-211ENST00000471260 TRAV22A0A0B4J277 110 aa7.33□□□□□ -1.24
HMGN1-211ENST00000471260 C9orf92A6NGG3 77 aa7.33□□□□□ -1.24
HMGN1-211ENST00000471260 C4orf26Q17RF5 130 aa7.33□□□□□ -1.24
HMGN1-211ENST00000471260 WFDC13Q8IUB5 93 aa7.33□□□□□ -1.24
HMGN1-211ENST00000471260 A0A0G2JQZ4 141 aa7.32□□□□□ -1.24
HMGN1-211ENST00000471260 MMP24-AS1A0A0U1RRL7 71 aa7.32□□□□□ -1.24
HMGN1-211ENST00000471260 TP53AIP1Q9HCN2 124 aa7.32□□□□□ -1.24
HMGN1-211ENST00000471260 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
HMGN1-211ENST00000471260 H0Y9P7 68 aa7.3□□□□□ -1.24
HMGN1-211ENST00000471260 DEFB116Q30KQ4 102 aa7.28□□□□□ -1.24
HMGN1-211ENST00000471260 Q96NJ1 140 aa7.28□□□□□ -1.24
HMGN1-211ENST00000471260 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
HMGN1-211ENST00000471260 C1orf64Q8NEQ6 169 aa7.25□□□□□ -1.25
HMGN1-211ENST00000471260 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
HMGN1-211ENST00000471260 V9GYY9 64 aa7.25□□□□□ -1.25
HMGN1-211ENST00000471260 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
HMGN1-211ENST00000471260 Q1T7F1 81 aa7.24□□□□□ -1.25
HMGN1-211ENST00000471260 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
HMGN1-211ENST00000471260 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
HMGN1-211ENST00000471260 PRO0628Q9UI54 55 aa7.23□□□□□ -1.25
HMGN1-211ENST00000471260 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-211ENST00000471260 C8orf87E5RJ46 101 aa7.17□□□□□ -1.26
HMGN1-211ENST00000471260 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
HMGN1-211ENST00000471260 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
HMGN1-211ENST00000471260 MT1HP80294 61 aa7.16□□□□□ -1.26
HMGN1-211ENST00000471260 MPLKIPQ8TAP9 179 aa7.14□□□□□ -1.27
HMGN1-211ENST00000471260 Q75L30 129 aa7.13□□□□□ -1.27
HMGN1-211ENST00000471260 IGHV6-1A0A0B4J1U7 121 aa7.12□□□□□ -1.27
HMGN1-211ENST00000471260 LOC101927531A0A1B0GV80 90 aa7.12□□□□□ -1.27
HMGN1-211ENST00000471260 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
HMGN1-211ENST00000471260 COX6B2Q6YFQ2 88 aa7.09□□□□□ -1.27
HMGN1-211ENST00000471260 NDUFS5O43920 106 aa7.07□□□□□ -1.28
HMGN1-211ENST00000471260 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
HMGN1-211ENST00000471260 M0R2T5 61 aa7.05□□□□□ -1.28
HMGN1-211ENST00000471260 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-211ENST00000471260 COA5Q86WW8 74 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms