RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SS18L2Q9UHA2 77 aa3.48□□□□□ -1.85
HDAC8-216ENST00000470998 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
HDAC8-216ENST00000470998 Q6ZSA8 131 aa3.47□□□□□ -1.85
HDAC8-216ENST00000470998 DPH3Q96FX2 82 aa3.47□□□□□ -1.85
HDAC8-216ENST00000470998 DNAH8Q96JB1 4490 aa3.47□□□□□ -1.85
HDAC8-216ENST00000470998 FAT1Q14517 4588 aa3.47□□□□□ -1.85
HDAC8-216ENST00000470998 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
HDAC8-216ENST00000470998 ZNF861PO60384 105 aa3.45□□□□□ -1.86
HDAC8-216ENST00000470998 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
HDAC8-216ENST00000470998 A0A087WSZ3 146 aa3.44□□□□□ -1.86
HDAC8-216ENST00000470998 HCG22E2RYF7 251 aa3.44□□□□□ -1.86
HDAC8-216ENST00000470998 SMR3BP02814 79 aaPredicted RBP3.44□□□□□ -1.86
HDAC8-216ENST00000470998 SCXQ7RTU7 201 aa3.44□□□□□ -1.86
HDAC8-216ENST00000470998 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
HDAC8-216ENST00000470998 A8MWP4 228 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
HDAC8-216ENST00000470998 PANO1I0J062 215 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 NDUFB1O75438 58 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 DSCR10P59022 87 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 CD164Q04900 197 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 C20orf197Q8N268 126 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 TMEM254Q8TBM7 123 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 PSORS1C2Q9UIG4 136 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 HERC1Q15751 4861 aa3.43□□□□□ -1.86
HDAC8-216ENST00000470998 H3BPC8 53 aa3.42□□□□□ -1.86
HDAC8-216ENST00000470998 C5orf47Q569G3 176 aa3.42□□□□□ -1.86
HDAC8-216ENST00000470998 FAM236DA0A1B0GTK5 79 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 K7EQZ3 153 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 IGLV7-43P04211 117 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 FAM236CP0DP71 79 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 MOBPQ13875 183 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 PRR15Q8IV56 129 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
HDAC8-216ENST00000470998 H7BZZ5 65 aa3.4□□□□□ -1.87
HDAC8-216ENST00000470998 OXTP01178 125 aa3.4□□□□□ -1.87
HDAC8-216ENST00000470998 FAM229BQ4G0N7 80 aa3.4□□□□□ -1.87
HDAC8-216ENST00000470998 SSBP3-AS1Q7Z2R9 100 aa3.4□□□□□ -1.87
HDAC8-216ENST00000470998 Q8N9L7 120 aa3.4□□□□□ -1.87
HDAC8-216ENST00000470998 CIRBP-AS1Q8TBR5 109 aa3.4□□□□□ -1.87
HDAC8-216ENST00000470998 A0A0U1RQV1 116 aa3.39□□□□□ -1.87
HDAC8-216ENST00000470998 MP68P56378 58 aa3.39□□□□□ -1.87
HDAC8-216ENST00000470998 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
HDAC8-216ENST00000470998 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
HDAC8-216ENST00000470998 KRTAP9-8Q9BYQ0 159 aa3.39□□□□□ -1.87
HDAC8-216ENST00000470998 IGLV9-49A0A0B4J1Y8 123 aa3.38□□□□□ -1.87
HDAC8-216ENST00000470998 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
HDAC8-216ENST00000470998 CASC2Q6XLA1 102 aa3.38□□□□□ -1.87
HDAC8-216ENST00000470998 TP53AIP1Q9HCN2 124 aa3.38□□□□□ -1.87
HDAC8-216ENST00000470998 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
HDAC8-216ENST00000470998 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
HDAC8-216ENST00000470998 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
HDAC8-216ENST00000470998 Q5XG85 94 aa3.37□□□□□ -1.87
HDAC8-216ENST00000470998 FLG2Q5D862 2391 aaPredicted RBP3.36□□□□□ -1.87
HDAC8-216ENST00000470998 CYSTM1Q9H1C7 97 aa3.36□□□□□ -1.87
HDAC8-216ENST00000470998 DMBT1Q9UGM3 2413 aaPredicted RBP3.36□□□□□ -1.87
HDAC8-216ENST00000470998 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
HDAC8-216ENST00000470998 hDV103S1A0JD37 113 aa3.35□□□□□ -1.87
HDAC8-216ENST00000470998 C8orf87E5RJ46 101 aa3.35□□□□□ -1.87
HDAC8-216ENST00000470998 ZCCHC13Q8WW36 166 aaKnown RBP3.35□□□□□ -1.87
HDAC8-216ENST00000470998 LIMD2Q9BT23 127 aa3.35□□□□□ -1.87
HDAC8-216ENST00000470998 SNURFQ9Y675 71 aa3.35□□□□□ -1.87
HDAC8-216ENST00000470998 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.87
HDAC8-216ENST00000470998 MMP24-AS1A0A0U1RRL7 71 aa3.34□□□□□ -1.87
HDAC8-216ENST00000470998 Q96NJ1 140 aa3.34□□□□□ -1.87
HDAC8-216ENST00000470998 HMCN2Q8NDA2 5059 aa3.34□□□□□ -1.88
HDAC8-216ENST00000470998 TRAV22A0A0B4J277 110 aa3.33□□□□□ -1.88
HDAC8-216ENST00000470998 A0A0G2JQZ4 141 aa3.33□□□□□ -1.88
HDAC8-216ENST00000470998 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
HDAC8-216ENST00000470998 WFDC13Q8IUB5 93 aa3.33□□□□□ -1.88
HDAC8-216ENST00000470998 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
HDAC8-216ENST00000470998 C8orf17Q9NRJ1 99 aa3.33□□□□□ -1.88
HDAC8-216ENST00000470998 PKHD1L1Q86WI1 4243 aa3.33□□□□□ -1.88
HDAC8-216ENST00000470998 CYP4F30PQ9H0H9 118 aa3.32□□□□□ -1.88
HDAC8-216ENST00000470998 SMIM26A0A096LP01 95 aa3.31□□□□□ -1.88
HDAC8-216ENST00000470998 H0Y9P7 68 aa3.31□□□□□ -1.88
HDAC8-216ENST00000470998 DEFB116Q30KQ4 102 aa3.31□□□□□ -1.88
HDAC8-216ENST00000470998 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
HDAC8-216ENST00000470998 SPINK6Q6UWN8 80 aa3.31□□□□□ -1.88
HDAC8-216ENST00000470998 MRPL34Q9BQ48 92 aaKnown RBP3.31□□□□□ -1.88
HDAC8-216ENST00000470998 SRRM2Q9UQ35 2752 aaKnown RBP3.31□□□□□ -1.88
HDAC8-216ENST00000470998 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
HDAC8-216ENST00000470998 IGHV6-1A0A0B4J1U7 121 aa3.29□□□□□ -1.88
HDAC8-216ENST00000470998 SPINK1P00995 79 aa3.29□□□□□ -1.88
HDAC8-216ENST00000470998 LOC101927531A0A1B0GV80 90 aa3.28□□□□□ -1.88
HDAC8-216ENST00000470998 MT1HL1P0DM35 61 aa3.28□□□□□ -1.88
HDAC8-216ENST00000470998 HRCT1Q6UXD1 115 aa3.28□□□□□ -1.88
HDAC8-216ENST00000470998 C1orf64Q8NEQ6 169 aa3.28□□□□□ -1.88
HDAC8-216ENST00000470998 LINC00208Q96KT6 92 aa3.28□□□□□ -1.88
HDAC8-216ENST00000470998 KRTAP1-4P0C5Y4 121 aa3.27□□□□□ -1.89
HDAC8-216ENST00000470998 A0A087X002 238 aa3.26□□□□□ -1.89
HDAC8-216ENST00000470998 KRTAP13-2Q52LG2 175 aa3.26□□□□□ -1.89
HDAC8-216ENST00000470998 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
HDAC8-216ENST00000470998 ANAPC11Q9NYG5 84 aa3.26□□□□□ -1.89
HDAC8-216ENST00000470998 V9GYY9 64 aa3.26□□□□□ -1.89
HDAC8-216ENST00000470998 IGLV7-46A0A075B6I9 117 aa3.25□□□□□ -1.89
HDAC8-216ENST00000470998 NDUFS5O43920 106 aa3.25□□□□□ -1.89
HDAC8-216ENST00000470998 C1orf195Q5TG92 126 aa3.25□□□□□ -1.89
HDAC8-216ENST00000470998 LINC00313P59037 77 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms