RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 C21orf62-AS1Q17RA5 79 aa7.4□□□□□ -1.22
TOP3B-215ENST00000470338 LOC110117498A0A087WWA1 95 aa7.38□□□□□ -1.23
TOP3B-215ENST00000470338 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
TOP3B-215ENST00000470338 F8W1H4 67 aa7.38□□□□□ -1.23
TOP3B-215ENST00000470338 MT1HP80294 61 aa7.38□□□□□ -1.23
TOP3B-215ENST00000470338 Q6ZQT0 140 aa7.38□□□□□ -1.23
TOP3B-215ENST00000470338 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
TOP3B-215ENST00000470338 MTURNQ8N3F0 131 aa7.37□□□□□ -1.23
TOP3B-215ENST00000470338 A0A1B0GW54 56 aa7.36□□□□□ -1.23
TOP3B-215ENST00000470338 PDE6GP18545 87 aa7.36□□□□□ -1.23
TOP3B-215ENST00000470338 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
TOP3B-215ENST00000470338 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
TOP3B-215ENST00000470338 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
TOP3B-215ENST00000470338 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
TOP3B-215ENST00000470338 J3KT08 172 aa7.33□□□□□ -1.24
TOP3B-215ENST00000470338 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
TOP3B-215ENST00000470338 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
TOP3B-215ENST00000470338 C8orf87E5RJ46 101 aa7.31□□□□□ -1.24
TOP3B-215ENST00000470338 SMCPP49901 116 aaPredicted RBP7.31□□□□□ -1.24
TOP3B-215ENST00000470338 COX6B2Q6YFQ2 88 aa7.31□□□□□ -1.24
TOP3B-215ENST00000470338 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
TOP3B-215ENST00000470338 NDUFB1O75438 58 aa7.25□□□□□ -1.25
TOP3B-215ENST00000470338 A8MWP4 228 aa7.24□□□□□ -1.25
TOP3B-215ENST00000470338 LORP23490 312 aaPredicted RBP7.23□□□□□ -1.25
TOP3B-215ENST00000470338 NREPQ16612 68 aa7.23□□□□□ -1.25
TOP3B-215ENST00000470338 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
TOP3B-215ENST00000470338 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
TOP3B-215ENST00000470338 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
TOP3B-215ENST00000470338 M0R2T5 61 aa7.21□□□□□ -1.26
TOP3B-215ENST00000470338 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
TOP3B-215ENST00000470338 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
TOP3B-215ENST00000470338 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
TOP3B-215ENST00000470338 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
TOP3B-215ENST00000470338 HRES1P13985 223 aa7.16□□□□□ -1.26
TOP3B-215ENST00000470338 MPLKIPQ8TAP9 179 aa7.16□□□□□ -1.26
TOP3B-215ENST00000470338 J3QR89 54 aa7.15□□□□□ -1.26
TOP3B-215ENST00000470338 Q6ZVQ6 151 aa7.14□□□□□ -1.27
TOP3B-215ENST00000470338 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
TOP3B-215ENST00000470338 RBM12B-AS1Q9P1G2 102 aa7.11□□□□□ -1.27
TOP3B-215ENST00000470338 FAM240AA0A1B0GVK7 77 aa7.1□□□□□ -1.27
TOP3B-215ENST00000470338 K7EQZ3 153 aa7.1□□□□□ -1.27
TOP3B-215ENST00000470338 ACYP1P07311 99 aa7.1□□□□□ -1.27
TOP3B-215ENST00000470338 TMEM254Q8TBM7 123 aa7.1□□□□□ -1.27
TOP3B-215ENST00000470338 K7ERU9 68 aa7.09□□□□□ -1.27
TOP3B-215ENST00000470338 BPY2O14599 106 aa7.09□□□□□ -1.27
TOP3B-215ENST00000470338 SPINK7P58062 85 aa7.09□□□□□ -1.27
TOP3B-215ENST00000470338 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
TOP3B-215ENST00000470338 FAM236DA0A1B0GTK5 79 aa7.08□□□□□ -1.28
TOP3B-215ENST00000470338 FAM236CP0DP71 79 aa7.08□□□□□ -1.28
TOP3B-215ENST00000470338 KRTAP9-6A0A140TA67 174 aa7.07□□□□□ -1.28
TOP3B-215ENST00000470338 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
TOP3B-215ENST00000470338 UBL5Q9BZL1 73 aa7.05□□□□□ -1.28
TOP3B-215ENST00000470338 LINC00846Q9NV44 126 aa7.03□□□□□ -1.28
TOP3B-215ENST00000470338 Q8N9L7 120 aa7.01□□□□□ -1.29
TOP3B-215ENST00000470338 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
TOP3B-215ENST00000470338 NDUFS5O43920 106 aa6.99□□□□□ -1.29
TOP3B-215ENST00000470338 CASC2Q6XLA1 102 aa6.97□□□□□ -1.29
TOP3B-215ENST00000470338 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
TOP3B-215ENST00000470338 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
TOP3B-215ENST00000470338 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
TOP3B-215ENST00000470338 ATP5EP2Q5VTU8 51 aa6.95□□□□□ -1.3
TOP3B-215ENST00000470338 Q5W150 140 aa6.95□□□□□ -1.3
TOP3B-215ENST00000470338 LINC00643Q86TS7 51 aa6.94□□□□□ -1.3
TOP3B-215ENST00000470338 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
TOP3B-215ENST00000470338 CXCL6P80162 114 aa6.92□□□□□ -1.3
TOP3B-215ENST00000470338 MT2AP02795 61 aa6.91□□□□□ -1.3
TOP3B-215ENST00000470338 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
TOP3B-215ENST00000470338 IGKV2-30P06310 120 aa6.88□□□□□ -1.31
TOP3B-215ENST00000470338 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
TOP3B-215ENST00000470338 MT1FP04733 61 aa6.85□□□□□ -1.31
TOP3B-215ENST00000470338 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
TOP3B-215ENST00000470338 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
TOP3B-215ENST00000470338 HIST1H4AP62805 103 aaKnown RBP6.81□□□□□ -1.32
TOP3B-215ENST00000470338 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
TOP3B-215ENST00000470338 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
TOP3B-215ENST00000470338 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
TOP3B-215ENST00000470338 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
TOP3B-215ENST00000470338 USH2AO75445 5202 aa6.79□□□□□ -1.32
TOP3B-215ENST00000470338 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
TOP3B-215ENST00000470338 A0A087WVE0 104 aa6.73□□□□□ -1.33
TOP3B-215ENST00000470338 LCE2BO14633 110 aa6.73□□□□□ -1.33
TOP3B-215ENST00000470338 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
TOP3B-215ENST00000470338 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
TOP3B-215ENST00000470338 C1orf64Q8NEQ6 169 aa6.66□□□□□ -1.34
TOP3B-215ENST00000470338 FAM236AA0A1B0GUQ0 79 aa6.65□□□□□ -1.34
TOP3B-215ENST00000470338 FAM236BA0A1B0GV22 79 aa6.65□□□□□ -1.34
TOP3B-215ENST00000470338 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
TOP3B-215ENST00000470338 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
TOP3B-215ENST00000470338 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
TOP3B-215ENST00000470338 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
TOP3B-215ENST00000470338 ATOX1O00244 68 aa6.6□□□□□ -1.35
TOP3B-215ENST00000470338 UQCRQO14949 82 aa6.6□□□□□ -1.35
TOP3B-215ENST00000470338 SMIM20Q8N5G0 67 aa6.6□□□□□ -1.35
TOP3B-215ENST00000470338 S4R3F8 94 aa6.6□□□□□ -1.35
TOP3B-215ENST00000470338 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
TOP3B-215ENST00000470338 LCA10Q71F78 164 aa6.57□□□□□ -1.36
TOP3B-215ENST00000470338 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
TOP3B-215ENST00000470338 OCR1Q9BZK8 76 aa6.56□□□□□ -1.36
TOP3B-215ENST00000470338 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
TOP3B-215ENST00000470338 H0Y9P7 68 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms