RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
LSM2-209ENST00000470083 SVBPQ8N300 66 aa5.39□□□□□ -1.55
LSM2-209ENST00000470083 C12orf57Q99622 126 aa5.39□□□□□ -1.55
LSM2-209ENST00000470083 PCP4L1A6NKN8 68 aa5.38□□□□□ -1.55
LSM2-209ENST00000470083 C3orf79P0CE67 100 aa5.38□□□□□ -1.55
LSM2-209ENST00000470083 C8orf87E5RJ46 101 aa5.37□□□□□ -1.55
LSM2-209ENST00000470083 DEFB116Q30KQ4 102 aa5.37□□□□□ -1.55
LSM2-209ENST00000470083 BVES-AS1Q5T3Y7 98 aa5.37□□□□□ -1.55
LSM2-209ENST00000470083 H3BMG7 143 aa5.36□□□□□ -1.55
LSM2-209ENST00000470083 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
LSM2-209ENST00000470083 NDUFA5Q16718 116 aa5.35□□□□□ -1.55
LSM2-209ENST00000470083 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
LSM2-209ENST00000470083 RAB37Q96AX2 223 aa5.34□□□□□ -1.55
LSM2-209ENST00000470083 A0A1B0GVX0 72 aa5.33□□□□□ -1.56
LSM2-209ENST00000470083 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
LSM2-209ENST00000470083 TRBV7-4A0A0J9YYF1 115 aa5.32□□□□□ -1.56
LSM2-209ENST00000470083 FAM236AA0A1B0GUQ0 79 aa5.31□□□□□ -1.56
LSM2-209ENST00000470083 FAM236BA0A1B0GV22 79 aa5.31□□□□□ -1.56
LSM2-209ENST00000470083 SNCGO76070 127 aa5.29□□□□□ -1.56
LSM2-209ENST00000470083 SPRR2DP22532 72 aa5.29□□□□□ -1.56
LSM2-209ENST00000470083 IMUPQ9GZP8 106 aa5.27□□□□□ -1.57
LSM2-209ENST00000470083 FABP2P12104 132 aa5.26□□□□□ -1.57
LSM2-209ENST00000470083 LYRM7Q5U5X0 104 aa5.26□□□□□ -1.57
LSM2-209ENST00000470083 DSCR8Q96T75 97 aa5.26□□□□□ -1.57
LSM2-209ENST00000470083 ANKRD29Q8N6D5 301 aa5.25□□□□□ -1.57
LSM2-209ENST00000470083 SEC61GP60059 68 aa5.24□□□□□ -1.57
LSM2-209ENST00000470083 IGKV3D-7A0A0C4DH55 119 aa5.23□□□□□ -1.57
LSM2-209ENST00000470083 H0YGX0 51 aa5.22□□□□□ -1.57
LSM2-209ENST00000470083 TRACP01848 142 aa5.22□□□□□ -1.57
LSM2-209ENST00000470083 KRTDAPP60985 99 aa5.22□□□□□ -1.57
LSM2-209ENST00000470083 ATOH7Q8N100 152 aa5.22□□□□□ -1.57
LSM2-209ENST00000470083 CCKP06307 115 aa5.21□□□□□ -1.58
LSM2-209ENST00000470083 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
LSM2-209ENST00000470083 SNRPEP62304 92 aaKnown RBP5.19□□□□□ -1.58
LSM2-209ENST00000470083 C5orf47Q569G3 176 aa5.19□□□□□ -1.58
LSM2-209ENST00000470083 A0A1B0GV72 72 aa5.18□□□□□ -1.58
LSM2-209ENST00000470083 A0A1B0GX51 115 aa5.18□□□□□ -1.58
LSM2-209ENST00000470083 J3KT08 172 aa5.18□□□□□ -1.58
LSM2-209ENST00000470083 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 TRIAP1O43715 76 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BKO60814 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BJP06899 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BOP23527 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BBP33778 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BDP58876 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BCP62807 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST2H2BEQ16778 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BHQ93079 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BNQ99877 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 HIST1H2BMQ99879 126 aa5.17□□□□□ -1.58
LSM2-209ENST00000470083 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
LSM2-209ENST00000470083 C8orf17Q9NRJ1 99 aa5.15□□□□□ -1.59
LSM2-209ENST00000470083 NDUFB1O75438 58 aa5.14□□□□□ -1.59
LSM2-209ENST00000470083 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
LSM2-209ENST00000470083 HIST1H4GQ99525 98 aa5.12□□□□□ -1.59
LSM2-209ENST00000470083 Q6ZVQ6 151 aa5.11□□□□□ -1.59
LSM2-209ENST00000470083 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
LSM2-209ENST00000470083 C2orf91Q6ZV80 131 aa5.1□□□□□ -1.59
LSM2-209ENST00000470083 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 LOC105371267A0A1B0GV96 52 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 H3BQ85 93 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 IGKV2-30P06310 120 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 VPS25Q9BRG1 176 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 ORMDL1Q9P0S3 153 aa5.09□□□□□ -1.59
LSM2-209ENST00000470083 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
LSM2-209ENST00000470083 A0A0B4J2C4 111 aa5.07□□□□□ -1.6
LSM2-209ENST00000470083 TMEM256-PLSCR3K7ERE1 68 aa5.07□□□□□ -1.6
LSM2-209ENST00000470083 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
LSM2-209ENST00000470083 DNAL4O96015 105 aa5.06□□□□□ -1.6
LSM2-209ENST00000470083 C4orf26Q17RF5 130 aa5.06□□□□□ -1.6
LSM2-209ENST00000470083 COA6Q5JTJ3 125 aaKnown RBP5.06□□□□□ -1.6
LSM2-209ENST00000470083 PRR15Q8IV56 129 aa5.05□□□□□ -1.6
LSM2-209ENST00000470083 S4R3F8 94 aa5.05□□□□□ -1.6
LSM2-209ENST00000470083 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
LSM2-209ENST00000470083 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
LSM2-209ENST00000470083 MT1XP80297 61 aa5.03□□□□□ -1.6
LSM2-209ENST00000470083 Q6ZQT0 140 aa5.03□□□□□ -1.6
LSM2-209ENST00000470083 MRPL34Q9BQ48 92 aaKnown RBP5.03□□□□□ -1.6
LSM2-209ENST00000470083 TMEM254Q8TBM7 123 aa5.02□□□□□ -1.61
LSM2-209ENST00000470083 LCA10Q71F78 164 aa5.01□□□□□ -1.61
LSM2-209ENST00000470083 RBM3P98179 157 aaKnown RBP4.99□□□□□ -1.61
LSM2-209ENST00000470083 MMP24-AS1A0A0U1RRL7 71 aa4.98□□□□□ -1.61
LSM2-209ENST00000470083 NDUFS5O43920 106 aa4.98□□□□□ -1.61
LSM2-209ENST00000470083 S100A1P23297 94 aa4.98□□□□□ -1.61
LSM2-209ENST00000470083 Q5W150 140 aa4.98□□□□□ -1.61
LSM2-209ENST00000470083 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
LSM2-209ENST00000470083 COX8AP10176 69 aa4.95□□□□□ -1.62
LSM2-209ENST00000470083 V9GYY9 64 aa4.95□□□□□ -1.62
LSM2-209ENST00000470083 hDV103S1A0JD37 113 aa4.94□□□□□ -1.62
LSM2-209ENST00000470083 C9JAW5 83 aa4.94□□□□□ -1.62
LSM2-209ENST00000470083 DLEU1O43261 78 aa4.93□□□□□ -1.62
LSM2-209ENST00000470083 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
LSM2-209ENST00000470083 K7EQZ3 153 aa4.9□□□□□ -1.63
LSM2-209ENST00000470083 CEND1Q8N111 149 aa4.9□□□□□ -1.63
LSM2-209ENST00000470083 HIGD1BQ9P298 99 aa4.9□□□□□ -1.63
LSM2-209ENST00000470083 A0A1B0GW54 56 aa4.89□□□□□ -1.63
LSM2-209ENST00000470083 HIST3H2BBQ8N257 126 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms