RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 NOTCH1P46531 2555 aa2.99□□□□□ -1.93
SF3B1-207ENST00000468925 SPART-AS1P0CW21 52 aa2.99□□□□□ -1.93
SF3B1-207ENST00000468925 PCOTHQ58A44 107 aa2.99□□□□□ -1.93
SF3B1-207ENST00000468925 C1orf134Q5TEV5 83 aa2.99□□□□□ -1.93
SF3B1-207ENST00000468925 CSAG1Q6PB30 78 aa2.99□□□□□ -1.93
SF3B1-207ENST00000468925 DCHS2Q6V1P9 2916 aa2.98□□□□□ -1.93
SF3B1-207ENST00000468925 DEFB116Q30KQ4 102 aa2.98□□□□□ -1.93
SF3B1-207ENST00000468925 C15orf56Q8N910 161 aa2.98□□□□□ -1.93
SF3B1-207ENST00000468925 DMAC1Q96GE9 116 aa2.98□□□□□ -1.93
SF3B1-207ENST00000468925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.98□□□□□ -1.935e-15■■■□□ 17.1
SF3B1-207ENST00000468925 FLNAP21333 2647 aaKnown RBP2.98□□□□□ -1.93
SF3B1-207ENST00000468925 A0A1W2PPR1 153 aa2.97□□□□□ -1.93
SF3B1-207ENST00000468925 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
SF3B1-207ENST00000468925 MRPL34Q9BQ48 92 aaKnown RBP2.97□□□□□ -1.93
SF3B1-207ENST00000468925 C8orf17Q9NRJ1 99 aa2.97□□□□□ -1.93
SF3B1-207ENST00000468925 MAP1AP78559 2803 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-207ENST00000468925 PRRC2CQ9Y520 2896 aaKnown RBP2.97□□□□□ -1.93
SF3B1-207ENST00000468925 CSPG4Q6UVK1 2322 aa2.97□□□□□ -1.93
SF3B1-207ENST00000468925 NBEAL2Q6ZNJ1 2754 aa2.96□□□□□ -1.94
SF3B1-207ENST00000468925 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
SF3B1-207ENST00000468925 LINC01556Q5JQF7 62 aa2.96□□□□□ -1.94
SF3B1-207ENST00000468925 ACANP16112 2415 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 TGP01266 2768 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 A0A096LPF7 62 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 A0A1B0GVX0 72 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 ZNF861PO60384 105 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 CHTF8P0CG12 524 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 ADM2Q7Z4H4 148 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 MEGF8Q7Z7M0 2845 aa2.95□□□□□ -1.94
SF3B1-207ENST00000468925 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
SF3B1-207ENST00000468925 NSD1Q96L73 2696 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-207ENST00000468925 IGLV7-43P04211 117 aa2.94□□□□□ -1.94
SF3B1-207ENST00000468925 MXRA5Q9NR99 2828 aa2.93□□□□□ -1.94
SF3B1-207ENST00000468925 K7ERS5 55 aa2.93□□□□□ -1.94
SF3B1-207ENST00000468925 TLN2Q9Y4G6 2542 aa2.92□□□□□ -1.94
SF3B1-207ENST00000468925 FAM168BA1KXE4 195 aa2.91□□□□□ -1.94
SF3B1-207ENST00000468925 CASC10Q5T4H9 136 aa2.91□□□□□ -1.94
SF3B1-207ENST00000468925 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
SF3B1-207ENST00000468925 ANAPC11Q9NYG5 84 aa2.91□□□□□ -1.94
SF3B1-207ENST00000468925 CUBNO60494 3623 aa2.91□□□□□ -1.94
SF3B1-207ENST00000468925 LY6G6CO95867 125 aa2.9□□□□□ -1.95
SF3B1-207ENST00000468925 DNAH10OSP0CZ25 163 aa2.9□□□□□ -1.95
SF3B1-207ENST00000468925 RYR3Q15413 4870 aa2.9□□□□□ -1.95
SF3B1-207ENST00000468925 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-207ENST00000468925 NOTCH3Q9UM47 2321 aa2.9□□□□□ -1.95
SF3B1-207ENST00000468925 ANK2Q01484 3957 aa2.89□□□□□ -1.95
SF3B1-207ENST00000468925 A8MUU9 505 aa2.88□□□□□ -1.95
SF3B1-207ENST00000468925 KRTAP13-3Q3SY46 172 aa2.88□□□□□ -1.95
SF3B1-207ENST00000468925 C14orf177Q52M58 125 aa2.88□□□□□ -1.95
SF3B1-207ENST00000468925 LINC00483Q53H64 154 aa2.88□□□□□ -1.95
SF3B1-207ENST00000468925 KMT2CQ8NEZ4 4911 aaKnown RBP2.88□□□□□ -1.95
SF3B1-207ENST00000468925 ALMS1Q8TCU4 4167 aa2.87□□□□□ -1.95
SF3B1-207ENST00000468925 NUPR2A6NF83 97 aa2.87□□□□□ -1.95
SF3B1-207ENST00000468925 KRTAP16-1A8MUX0 517 aa2.87□□□□□ -1.95
SF3B1-207ENST00000468925 Q96NJ1 140 aa2.87□□□□□ -1.95
SF3B1-207ENST00000468925 HTN3P15516 51 aa2.86□□□□□ -1.95
SF3B1-207ENST00000468925 BIRC6Q9NR09 4857 aa2.86□□□□□ -1.95
SF3B1-207ENST00000468925 VPS13CQ709C8 3753 aa2.85□□□□□ -1.95
SF3B1-207ENST00000468925 DEFB135Q30KP9 77 aa2.85□□□□□ -1.95
SF3B1-207ENST00000468925 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
SF3B1-207ENST00000468925 PCLOQ9Y6V0 5065 aa2.85□□□□□ -1.95
SF3B1-207ENST00000468925 PRLHP81277 87 aa2.84□□□□□ -1.95
SF3B1-207ENST00000468925 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.95
SF3B1-207ENST00000468925 MGAM2Q2M2H8 2515 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 PANO1I0J062 215 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 Q5W150 140 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 LINC00304Q8N9R0 145 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 ZANQ9Y493 2812 aa2.82□□□□□ -1.96
SF3B1-207ENST00000468925 DEFB113Q30KQ7 82 aa2.81□□□□□ -1.96
SF3B1-207ENST00000468925 C20orf166-AS1Q96NR2 134 aa2.81□□□□□ -1.96
SF3B1-207ENST00000468925 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
SF3B1-207ENST00000468925 A0A0G2JQZ4 141 aa2.8□□□□□ -1.96
SF3B1-207ENST00000468925 A0A1W2PNN7 141 aa2.8□□□□□ -1.96
SF3B1-207ENST00000468925 KRTAP13-1Q8IUC0 172 aa2.8□□□□□ -1.96
SF3B1-207ENST00000468925 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
SF3B1-207ENST00000468925 HRNRQ86YZ3 2850 aaPredicted RBP2.79□□□□□ -1.96
SF3B1-207ENST00000468925 A0A1B0GU33 70 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 DEFB4AO15263 64 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 P0C880 135 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 SSBP3-AS1Q7Z2R9 100 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 SVEP1Q4LDE5 3571 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 RYR1P21817 5038 aa2.79□□□□□ -1.96
SF3B1-207ENST00000468925 A0A096LNI7 61 aa2.78□□□□□ -1.96
SF3B1-207ENST00000468925 SMR3AQ99954 134 aa2.78□□□□□ -1.96
SF3B1-207ENST00000468925 HYDINQ4G0P3 5121 aa2.78□□□□□ -1.96
SF3B1-207ENST00000468925 SONP18583 2426 aaKnown RBP2.77□□□□□ -1.97
SF3B1-207ENST00000468925 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
SF3B1-207ENST00000468925 MT3P25713 68 aa2.77□□□□□ -1.97
SF3B1-207ENST00000468925 H1FX-AS1Q4G0G2 97 aa2.76□□□□□ -1.97
SF3B1-207ENST00000468925 PRKDCP78527 4128 aaKnown RBP2.76□□□□□ -1.97
SF3B1-207ENST00000468925 H0YAA0 97 aa2.75□□□□□ -1.97
SF3B1-207ENST00000468925 Q6ZSA8 131 aa2.75□□□□□ -1.97
SF3B1-207ENST00000468925 HIVEP2P31629 2446 aa2.75□□□□□ -1.97
SF3B1-207ENST00000468925 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
SF3B1-207ENST00000468925 A0A087WTM6 91 aa2.74□□□□□ -1.97
SF3B1-207ENST00000468925 K7EIL1 84 aa2.73□□□□□ -1.97
SF3B1-207ENST00000468925 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms