RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 NBEAQ8NFP9 2946 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 ROS1P08922 2347 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 PCNX1Q96RV3 2341 aa1.2□□□□□ -2.22
XRN1-207ENST00000468894 GVINP1Q7Z2Y8 2422 aa1.19□□□□□ -2.22
XRN1-207ENST00000468894 SMG1Q96Q15 3661 aaKnown RBP1.19□□□□□ -2.22
XRN1-207ENST00000468894 TP53AIP1Q9HCN2 124 aa1.19□□□□□ -2.22
XRN1-207ENST00000468894 VPS13AQ96RL7 3174 aa1.18□□□□□ -2.22
XRN1-207ENST00000468894 CCL22O00626 93 aa1.18□□□□□ -2.22
XRN1-207ENST00000468894 PIGYQ3MUY2 71 aa1.18□□□□□ -2.22
XRN1-207ENST00000468894 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
XRN1-207ENST00000468894 CEP290O15078 2479 aa1.18□□□□□ -2.22
XRN1-207ENST00000468894 CRYBG3Q68DQ2 2970 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 USP9YO00507 2555 aaPredicted RBP1.17□□□□□ -2.22
XRN1-207ENST00000468894 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 DSPP15924 2871 aaKnown RBP1.17□□□□□ -2.22
XRN1-207ENST00000468894 NDUFA1O15239 70 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 IAPPP10997 89 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 SMIM2Q9BVW6 85 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 CNFNQ9BYD5 112 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 CELSR2Q9HCU4 2923 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 FRYQ5TBA9 3013 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 RYR2Q92736 4967 aa1.17□□□□□ -2.22
XRN1-207ENST00000468894 AKAP13Q12802 2813 aa1.16□□□□□ -2.22
XRN1-207ENST00000468894 TENM2Q9NT68 2774 aa1.16□□□□□ -2.22
XRN1-207ENST00000468894 LYNX1G3V0Z9 82 aa1.16□□□□□ -2.22
XRN1-207ENST00000468894 COX6A2Q02221 97 aa1.16□□□□□ -2.22
XRN1-207ENST00000468894 DNAH14Q0VDD8 3507 aa1.15□□□□□ -2.22
XRN1-207ENST00000468894 NSD1Q96L73 2696 aaPredicted RBP1.15□□□□□ -2.23
XRN1-207ENST00000468894 CSPG4Q6UVK1 2322 aa1.15□□□□□ -2.23
XRN1-207ENST00000468894 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
XRN1-207ENST00000468894 MINOS1Q5TGZ0 78 aa1.14□□□□□ -2.23
XRN1-207ENST00000468894 CHD7Q9P2D1 2997 aa1.14□□□□□ -2.23
XRN1-207ENST00000468894 ITPR1Q14643 2758 aa1.14□□□□□ -2.23
XRN1-207ENST00000468894 LOC400499M0QZD8 3231 aa1.14□□□□□ -2.23
XRN1-207ENST00000468894 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
XRN1-207ENST00000468894 ABCA13Q86UQ4 5058 aa1.13□□□□□ -2.23
XRN1-207ENST00000468894 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
XRN1-207ENST00000468894 EP300Q09472 2414 aaPredicted RBP1.13□□□□□ -2.23
XRN1-207ENST00000468894 SPTBN1Q01082 2364 aaKnown RBP1.12□□□□□ -2.23
XRN1-207ENST00000468894 WDR87Q6ZQQ6 2873 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 MTORP42345 2549 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 RPS27P42677 84 aaKnown RBP1.12□□□□□ -2.23
XRN1-207ENST00000468894 SPINK9Q5DT21 86 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 RPS27LQ71UM5 84 aaKnown RBP1.12□□□□□ -2.23
XRN1-207ENST00000468894 HIVEP3Q5T1R4 2406 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 ZZEF1O43149 2961 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 FSIP2Q5CZC0 6907 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 CACNA1HO95180 2353 aa1.12□□□□□ -2.23
XRN1-207ENST00000468894 SPTBN2O15020 2390 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 MXRA5Q9NR99 2828 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 WFDC13Q8IUB5 93 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 APLNQ9ULZ1 77 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 MYO15AQ9UKN7 3530 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 HERC1Q15751 4861 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 AHNAK2Q8IVF2 5795 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 TLN2Q9Y4G6 2542 aa1.11□□□□□ -2.23
XRN1-207ENST00000468894 SPTA1P02549 2419 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 DEFB130BP0DP73 79 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 DEFB130AP0DP74 79 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 SPRR1AP35321 89 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 H1FX-AS1Q4G0G2 97 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 ARHGAP5-AS1Q96IT6 56 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 TTTY10Q9BZA0 68 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 PRO0255Q9UI72 69 aa1.1□□□□□ -2.23
XRN1-207ENST00000468894 LRBAP50851 2863 aa1.09□□□□□ -2.23
XRN1-207ENST00000468894 Q5VSD8 79 aa1.09□□□□□ -2.23
XRN1-207ENST00000468894 WDFY3Q8IZQ1 3526 aa1.09□□□□□ -2.24
XRN1-207ENST00000468894 CHD9Q3L8U1 2897 aa1.09□□□□□ -2.24
XRN1-207ENST00000468894 PRRC2CQ9Y520 2896 aaKnown RBP1.09□□□□□ -2.24
XRN1-207ENST00000468894 F8P00451 2351 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 FRYLO94915 3013 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 COL12A1Q99715 3063 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 RPL39P62891 51 aaKnown RBP1.08□□□□□ -2.24
XRN1-207ENST00000468894 WFDC10BQ8IUB3 73 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 NBPF19A0A087WUL8 3843 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 FREM2Q5SZK8 3169 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 HERC2O95714 4834 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 NEBP20929 6669 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 TGP01266 2768 aa1.08□□□□□ -2.24
XRN1-207ENST00000468894 FAT4Q6V0I7 4981 aa1.07□□□□□ -2.24
XRN1-207ENST00000468894 NIPBLQ6KC79 2804 aaeCLIP1.07□□□□□ -2.24
XRN1-207ENST00000468894 OTOGQ6ZRI0 2925 aa1.07□□□□□ -2.24
XRN1-207ENST00000468894 SYNE2Q8WXH0 6885 aaKnown RBP1.06□□□□□ -2.24
XRN1-207ENST00000468894 SPRR1BP22528 89 aa1.06□□□□□ -2.24
XRN1-207ENST00000468894 POLR2KP53803 58 aaKnown RBP1.06□□□□□ -2.24
XRN1-207ENST00000468894 KLK9Q2XQG4 91 aa1.06□□□□□ -2.24
XRN1-207ENST00000468894 DEFB105AQ8NG35 78 aa1.06□□□□□ -2.24
XRN1-207ENST00000468894 KAAG1Q9UBP8 84 aa1.06□□□□□ -2.24
XRN1-207ENST00000468894 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
XRN1-207ENST00000468894 SPENQ96T58 3664 aaKnown RBP1.05□□□□□ -2.24
XRN1-207ENST00000468894 TENM3Q9P273 2699 aa1.05□□□□□ -2.24
XRN1-207ENST00000468894 RPL39LQ96EH5 51 aaKnown RBP1.05□□□□□ -2.24
XRN1-207ENST00000468894 MGAQ8IWI9 3026 aa1.05□□□□□ -2.24
XRN1-207ENST00000468894 DMXL1Q9Y485 3027 aa1.05□□□□□ -2.24
XRN1-207ENST00000468894 SRRM2Q9UQ35 2752 aaKnown RBP1.05□□□□□ -2.24
XRN1-207ENST00000468894 H3BSH0 61 aa1.04□□□□□ -2.24
XRN1-207ENST00000468894 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
XRN1-207ENST00000468894 RIF1Q5UIP0 2472 aaKnown RBP1.04□□□□□ -2.24
XRN1-207ENST00000468894 MGAM2Q2M2H8 2515 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms