RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 C9orf92A6NGG3 77 aa8.94□□□□□ -0.98
HLA-C-205ENST00000466892 A8MWP4 228 aa8.94□□□□□ -0.98
HLA-C-205ENST00000466892 LRP2P98164 4655 aa8.93□□□□□ -0.98
HLA-C-205ENST00000466892 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
HLA-C-205ENST00000466892 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
HLA-C-205ENST00000466892 BPY2O14599 106 aa8.92□□□□□ -0.98
HLA-C-205ENST00000466892 LINC00313P59037 77 aa8.9□□□□□ -0.98
HLA-C-205ENST00000466892 LPAP08519 4548 aa8.89□□□□□ -0.99
HLA-C-205ENST00000466892 IGHV6-1A0A0B4J1U7 121 aa8.89□□□□□ -0.99
HLA-C-205ENST00000466892 J3QR89 54 aa8.89□□□□□ -0.99
HLA-C-205ENST00000466892 DSCR10P59022 87 aa8.87□□□□□ -0.99
HLA-C-205ENST00000466892 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
HLA-C-205ENST00000466892 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
HLA-C-205ENST00000466892 IGKV3D-7A0A0C4DH55 119 aa8.86□□□□□ -0.99
HLA-C-205ENST00000466892 CXCL6P80162 114 aa8.84□□□□□ -0.99
HLA-C-205ENST00000466892 Q75L30 129 aa8.84□□□□□ -0.99
HLA-C-205ENST00000466892 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
HLA-C-205ENST00000466892 C20orf166-AS1Q96NR2 134 aa8.83□□□□□ -1
HLA-C-205ENST00000466892 K7EQZ3 153 aa8.82□□□□□ -1
HLA-C-205ENST00000466892 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
HLA-C-205ENST00000466892 ATP5EP2Q5VTU8 51 aa8.81□□□□□ -1
HLA-C-205ENST00000466892 C8orf17Q9NRJ1 99 aa8.81□□□□□ -1
HLA-C-205ENST00000466892 A8MUU9 505 aa8.8□□□□□ -1
HLA-C-205ENST00000466892 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
HLA-C-205ENST00000466892 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
HLA-C-205ENST00000466892 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
HLA-C-205ENST00000466892 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
HLA-C-205ENST00000466892 LINC00643Q86TS7 51 aa8.75□□□□□ -1.01
HLA-C-205ENST00000466892 K7ERU9 68 aa8.74□□□□□ -1.01
HLA-C-205ENST00000466892 Q8N9P0 234 aaPredicted RBP8.74□□□□□ -1.01
HLA-C-205ENST00000466892 TMEM254Q8TBM7 123 aa8.74□□□□□ -1.01
HLA-C-205ENST00000466892 hDV103S1A0JD37 113 aa8.72□□□□□ -1.01
HLA-C-205ENST00000466892 Q8N9L7 120 aa8.72□□□□□ -1.01
HLA-C-205ENST00000466892 PCOTHQ58A44 107 aa8.71□□□□□ -1.02
HLA-C-205ENST00000466892 MRPL34Q9BQ48 92 aaKnown RBP8.7□□□□□ -1.02
HLA-C-205ENST00000466892 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
HLA-C-205ENST00000466892 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
HLA-C-205ENST00000466892 MUC17Q685J3 4493 aa8.64□□□□□ -1.03
HLA-C-205ENST00000466892 WFDC13Q8IUB5 93 aa8.63□□□□□ -1.03
HLA-C-205ENST00000466892 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
HLA-C-205ENST00000466892 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
HLA-C-205ENST00000466892 NDUFS5O43920 106 aa8.58□□□□□ -1.04
HLA-C-205ENST00000466892 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
HLA-C-205ENST00000466892 A0A0U1RQV1 116 aa8.56□□□□□ -1.04
HLA-C-205ENST00000466892 KRTAP4-1Q9BYQ7 146 aa8.56□□□□□ -1.04
HLA-C-205ENST00000466892 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
HLA-C-205ENST00000466892 IMUPQ9GZP8 106 aa8.53□□□□□ -1.04
HLA-C-205ENST00000466892 MUC2Q02817 5179 aa8.53□□□□□ -1.04
HLA-C-205ENST00000466892 A0A087WVE0 104 aa8.48□□□□□ -1.05
HLA-C-205ENST00000466892 MT-ATP8P03928 68 aa8.43□□□□□ -1.06
HLA-C-205ENST00000466892 SPINK7P58062 85 aa8.43□□□□□ -1.06
HLA-C-205ENST00000466892 Q5W150 140 aa8.43□□□□□ -1.06
HLA-C-205ENST00000466892 UQCRQO14949 82 aa8.4□□□□□ -1.06
HLA-C-205ENST00000466892 TRAV22A0A0B4J277 110 aa8.38□□□□□ -1.07
HLA-C-205ENST00000466892 C7orf65Q6ZTY9 151 aa8.38□□□□□ -1.07
HLA-C-205ENST00000466892 HRES1P13985 223 aa8.36□□□□□ -1.07
HLA-C-205ENST00000466892 ATOX1O00244 68 aa8.35□□□□□ -1.07
HLA-C-205ENST00000466892 SCGB1A1P11684 91 aa8.35□□□□□ -1.07
HLA-C-205ENST00000466892 KRTAP19-2Q3LHN2 52 aa8.35□□□□□ -1.07
HLA-C-205ENST00000466892 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
HLA-C-205ENST00000466892 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
HLA-C-205ENST00000466892 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
HLA-C-205ENST00000466892 IGKV2D-30A0A075B6S6 120 aa8.33□□□□□ -1.08
HLA-C-205ENST00000466892 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
HLA-C-205ENST00000466892 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
HLA-C-205ENST00000466892 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
HLA-C-205ENST00000466892 SMIM20Q8N5G0 67 aa8.3□□□□□ -1.08
HLA-C-205ENST00000466892 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
HLA-C-205ENST00000466892 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
HLA-C-205ENST00000466892 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
HLA-C-205ENST00000466892 C5orf47Q569G3 176 aa8.28□□□□□ -1.08
HLA-C-205ENST00000466892 H0Y9P7 68 aa8.27□□□□□ -1.09
HLA-C-205ENST00000466892 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
HLA-C-205ENST00000466892 MP68P56378 58 aa8.26□□□□□ -1.09
HLA-C-205ENST00000466892 H3BPC8 53 aa8.24□□□□□ -1.09
HLA-C-205ENST00000466892 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
HLA-C-205ENST00000466892 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
HLA-C-205ENST00000466892 CYP4F30PQ9H0H9 118 aa8.23□□□□□ -1.09
HLA-C-205ENST00000466892 LCE2AQ5TA79 106 aaPredicted RBP8.22□□□□□ -1.09
HLA-C-205ENST00000466892 TRAV7A0A075B6U4 112 aa8.2□□□□□ -1.1
HLA-C-205ENST00000466892 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
HLA-C-205ENST00000466892 MT1HP80294 61 aa8.18□□□□□ -1.1
HLA-C-205ENST00000466892 LINC00208Q96KT6 92 aa8.17□□□□□ -1.1
HLA-C-205ENST00000466892 C4orf26Q17RF5 130 aa8.14□□□□□ -1.11
HLA-C-205ENST00000466892 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
HLA-C-205ENST00000466892 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
HLA-C-205ENST00000466892 M0R2T5 61 aa8.06□□□□□ -1.12
HLA-C-205ENST00000466892 LCE2BO14633 110 aa8.03□□□□□ -1.12
HLA-C-205ENST00000466892 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
HLA-C-205ENST00000466892 A8MUN3 132 aa8.02□□□□□ -1.13
HLA-C-205ENST00000466892 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
HLA-C-205ENST00000466892 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
HLA-C-205ENST00000466892 COX7CP15954 63 aa7.97□□□□□ -1.13
HLA-C-205ENST00000466892 KRTAP10-6P60371 365 aaPredicted RBP7.95□□□□□ -1.14
HLA-C-205ENST00000466892 C20orf197Q8N268 126 aa7.95□□□□□ -1.14
HLA-C-205ENST00000466892 LORP23490 312 aaPredicted RBP7.94□□□□□ -1.14
HLA-C-205ENST00000466892 S4R3F8 94 aa7.92□□□□□ -1.14
HLA-C-205ENST00000466892 ANAPC13Q9BS18 74 aa7.91□□□□□ -1.14
HLA-C-205ENST00000466892 SNURFQ9Y675 71 aa7.91□□□□□ -1.14
HLA-C-205ENST00000466892 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms