RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 MACF1Q9UPN3 7388 aaKnown RBP9.34□□□□□ -0.91
SRSF4-202ENST00000466448 LINC00313P59037 77 aa9.33□□□□□ -0.92
SRSF4-202ENST00000466448 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
SRSF4-202ENST00000466448 SYNE2Q8WXH0 6885 aaKnown RBP9.32□□□□□ -0.92
SRSF4-202ENST00000466448 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
SRSF4-202ENST00000466448 TRBV7-4A0A0J9YYF1 115 aa9.31□□□□□ -0.92
SRSF4-202ENST00000466448 ATXN8Q156A1 80 aa9.31□□□□□ -0.92
SRSF4-202ENST00000466448 A0A1B0GV72 72 aa9.3□□□□□ -0.92
SRSF4-202ENST00000466448 BAALC-AS2P0C853 105 aa9.3□□□□□ -0.92
SRSF4-202ENST00000466448 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
SRSF4-202ENST00000466448 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
SRSF4-202ENST00000466448 NOTCH2NLQ7Z3S9 236 aa9.29□□□□□ -0.92
SRSF4-202ENST00000466448 RBM3P98179 157 aaKnown RBP9.28□□□□□ -0.92
SRSF4-202ENST00000466448 BATFQ16520 125 aa9.28□□□□□ -0.92
SRSF4-202ENST00000466448 NAA38Q9BRA0 125 aaKnown RBP9.28□□□□□ -0.92
SRSF4-202ENST00000466448 CCKP06307 115 aa9.27□□□□□ -0.93
SRSF4-202ENST00000466448 DSCR8Q96T75 97 aa9.26□□□□□ -0.93
SRSF4-202ENST00000466448 DEFB116Q30KQ4 102 aa9.23□□□□□ -0.93
SRSF4-202ENST00000466448 C9JAW5 83 aa9.21□□□□□ -0.94
SRSF4-202ENST00000466448 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
SRSF4-202ENST00000466448 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
SRSF4-202ENST00000466448 JMJD7-PLA2G4BH0Y9G9 81 aa9.2□□□□□ -0.94
SRSF4-202ENST00000466448 VPS25Q9BRG1 176 aa9.2□□□□□ -0.94
SRSF4-202ENST00000466448 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
SRSF4-202ENST00000466448 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
SRSF4-202ENST00000466448 PDE6GP18545 87 aa9.15□□□□□ -0.94
SRSF4-202ENST00000466448 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
SRSF4-202ENST00000466448 MTURNQ8N3F0 131 aa9.15□□□□□ -0.94
SRSF4-202ENST00000466448 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
SRSF4-202ENST00000466448 A0A1W2PPM0 123 aa9.13□□□□□ -0.95
SRSF4-202ENST00000466448 LINC00846Q9NV44 126 aa9.13□□□□□ -0.95
SRSF4-202ENST00000466448 LOC110117498A0A087WWA1 95 aa9.12□□□□□ -0.95
SRSF4-202ENST00000466448 A0A1B0GW54 56 aa9.12□□□□□ -0.95
SRSF4-202ENST00000466448 Q6ZQT0 140 aa9.1□□□□□ -0.95
SRSF4-202ENST00000466448 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
SRSF4-202ENST00000466448 SPINK7P58062 85 aa9.09□□□□□ -0.95
SRSF4-202ENST00000466448 ZCCHC13Q8WW36 166 aaKnown RBP9.09□□□□□ -0.95
SRSF4-202ENST00000466448 C8orf87E5RJ46 101 aa9.08□□□□□ -0.96
SRSF4-202ENST00000466448 J3KT08 172 aa9.08□□□□□ -0.96
SRSF4-202ENST00000466448 H3BT86 120 aa9.07□□□□□ -0.96
SRSF4-202ENST00000466448 C14orf132Q9NPU4 83 aa9.07□□□□□ -0.96
SRSF4-202ENST00000466448 COL5A1-AS1Q5SY13 56 aa9.04□□□□□ -0.96
SRSF4-202ENST00000466448 A8MWP4 228 aa9.02□□□□□ -0.97
SRSF4-202ENST00000466448 SPCS1Q9Y6A9 102 aa9.02□□□□□ -0.97
SRSF4-202ENST00000466448 NDUFB1O75438 58 aa9□□□□□ -0.97
SRSF4-202ENST00000466448 WFDC13Q8IUB5 93 aa8.99□□□□□ -0.97
SRSF4-202ENST00000466448 Q8N9P0 234 aaPredicted RBP8.98□□□□□ -0.97
SRSF4-202ENST00000466448 NREPQ16612 68 aa8.97□□□□□ -0.97
SRSF4-202ENST00000466448 KRTAP6-3Q3LI67 103 aa8.95□□□□□ -0.98
SRSF4-202ENST00000466448 PCP4L1A6NKN8 68 aa8.89□□□□□ -0.99
SRSF4-202ENST00000466448 K7EP34 96 aa8.89□□□□□ -0.99
SRSF4-202ENST00000466448 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
SRSF4-202ENST00000466448 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
SRSF4-202ENST00000466448 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
SRSF4-202ENST00000466448 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
SRSF4-202ENST00000466448 GTF2H5Q6ZYL4 71 aa8.85□□□□□ -0.99
SRSF4-202ENST00000466448 PRO0461Q9UI25 63 aa8.84□□□□□ -0.99
SRSF4-202ENST00000466448 BPY2O14599 106 aa8.81□□□□□ -1
SRSF4-202ENST00000466448 Q6ZVQ6 151 aa8.81□□□□□ -1
SRSF4-202ENST00000466448 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
SRSF4-202ENST00000466448 NEBP20929 6669 aa8.77□□□□□ -1.01
SRSF4-202ENST00000466448 F8W1H4 67 aa8.76□□□□□ -1.01
SRSF4-202ENST00000466448 K7EQZ3 153 aa8.76□□□□□ -1.01
SRSF4-202ENST00000466448 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
SRSF4-202ENST00000466448 MMP24-AS1A0A0U1RRL7 71 aa8.75□□□□□ -1.01
SRSF4-202ENST00000466448 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
SRSF4-202ENST00000466448 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
SRSF4-202ENST00000466448 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
SRSF4-202ENST00000466448 NDUFS5O43920 106 aa8.67□□□□□ -1.02
SRSF4-202ENST00000466448 ETDBQ3ZM63 59 aa8.67□□□□□ -1.02
SRSF4-202ENST00000466448 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
SRSF4-202ENST00000466448 Q8N9L7 120 aa8.64□□□□□ -1.03
SRSF4-202ENST00000466448 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
SRSF4-202ENST00000466448 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
SRSF4-202ENST00000466448 MUC12Q9UKN1 5478 aa8.6□□□□□ -1.03
SRSF4-202ENST00000466448 A6NN06 94 aa8.58□□□□□ -1.04
SRSF4-202ENST00000466448 C7orf65Q6ZTY9 151 aa8.58□□□□□ -1.04
SRSF4-202ENST00000466448 Q5W150 140 aa8.57□□□□□ -1.04
SRSF4-202ENST00000466448 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
SRSF4-202ENST00000466448 CXCL6P80162 114 aa8.56□□□□□ -1.04
SRSF4-202ENST00000466448 MT1BP07438 61 aa8.55□□□□□ -1.04
SRSF4-202ENST00000466448 ACYP1P07311 99 aa8.53□□□□□ -1.04
SRSF4-202ENST00000466448 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
SRSF4-202ENST00000466448 FAM236AA0A1B0GUQ0 79 aa8.5□□□□□ -1.05
SRSF4-202ENST00000466448 FAM236BA0A1B0GV22 79 aa8.5□□□□□ -1.05
SRSF4-202ENST00000466448 C5orf47Q569G3 176 aa8.5□□□□□ -1.05
SRSF4-202ENST00000466448 Q5VV11 94 aa8.5□□□□□ -1.05
SRSF4-202ENST00000466448 FAM240AA0A1B0GVK7 77 aa8.47□□□□□ -1.05
SRSF4-202ENST00000466448 KRTAP20-1Q3LI63 56 aa8.47□□□□□ -1.05
SRSF4-202ENST00000466448 KRTAP19-8Q3LI54 63 aa8.46□□□□□ -1.06
SRSF4-202ENST00000466448 SPRR2GQ9BYE4 73 aa8.45□□□□□ -1.06
SRSF4-202ENST00000466448 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
SRSF4-202ENST00000466448 KRTAP10-5P60370 271 aa8.42□□□□□ -1.06
SRSF4-202ENST00000466448 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
SRSF4-202ENST00000466448 A0A1B0GV90 55 aa8.4□□□□□ -1.06
SRSF4-202ENST00000466448 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
SRSF4-202ENST00000466448 KRTAP5-9P26371 169 aa8.39□□□□□ -1.07
SRSF4-202ENST00000466448 S4R3F8 94 aa8.38□□□□□ -1.07
SRSF4-202ENST00000466448 KMT2DO14686 5537 aa8.36□□□□□ -1.07
SRSF4-202ENST00000466448 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms