RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TRAPPC2BP0DI82 140 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 TMEM170BQ5T4T1 132 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 SMIM4Q8WVI0 70 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 MANBALQ9NQG1 85 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 DMBT1Q9UGM3 2413 aaPredicted RBP0.73□□□□□ -2.29
SMC4-203ENST00000462668 DEFB133Q30KQ1 61 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 RABAC1Q9UI14 185 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 SPTBP11277 2137 aa0.73□□□□□ -2.29
SMC4-203ENST00000462668 SPINT3P49223 89 aa0.72□□□□□ -2.29
SMC4-203ENST00000462668 CFDP00746 253 aaPredicted RBP0.72□□□□□ -2.29
SMC4-203ENST00000462668 MYO7BQ6PIF6 2116 aa0.72□□□□□ -2.29
SMC4-203ENST00000462668 HMGN3Q15651 99 aa0.72□□□□□ -2.29
SMC4-203ENST00000462668 ARL2-SNX15V9GYD0 113 aa0.72□□□□□ -2.29
SMC4-203ENST00000462668 MT1HP80294 61 aa0.71□□□□□ -2.3
SMC4-203ENST00000462668 CFAP126Q5VTH2 177 aa0.71□□□□□ -2.3
SMC4-203ENST00000462668 GOLGA4Q13439 2230 aaKnown RBP0.71□□□□□ -2.3
SMC4-203ENST00000462668 STATHP02808 62 aa0.71□□□□□ -2.3
SMC4-203ENST00000462668 MGPP08493 103 aa0.71□□□□□ -2.3
SMC4-203ENST00000462668 H3BQF6 201 aa0.7□□□□□ -2.3
SMC4-203ENST00000462668 I3L2K1 104 aa0.7□□□□□ -2.3
SMC4-203ENST00000462668 FAM103A1Q9BTL3 118 aaKnown RBP0.7□□□□□ -2.3
SMC4-203ENST00000462668 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
SMC4-203ENST00000462668 PRR15LQ9BU68 103 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 F2Z2F3 143 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 KRTAP4-1Q9BYQ7 146 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 A0A0D9SFI3 127 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 CYB5AP00167 134 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 FAUP35544 74 aaKnown RBP0.69□□□□□ -2.3
SMC4-203ENST00000462668 NMSQ5H8A3 153 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 DEFB121Q5J5C9 76 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 PSENENQ9NZ42 101 aa0.69□□□□□ -2.3
SMC4-203ENST00000462668 C10orf113Q5VZT2 155 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 Q9H521 79 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 UBE2D4Q9Y2X8 147 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 KNL1Q8NG31 2342 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 PMCHL1Q16048 86 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 ABCA1O95477 2261 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 SPINK7P58062 85 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 SPINK6Q6UWN8 80 aa0.68□□□□□ -2.3
SMC4-203ENST00000462668 CTXND1A0A1B0GTU2 59 aa0.67□□□□□ -2.3
SMC4-203ENST00000462668 UQCRHP07919 91 aa0.67□□□□□ -2.3
SMC4-203ENST00000462668 SNRPFP62306 86 aaKnown RBP0.67□□□□□ -2.3
SMC4-203ENST00000462668 MUC19Q7Z5P9 8384 aa0.67□□□□□ -2.3
SMC4-203ENST00000462668 HMGN2P05204 90 aaKnown RBP0.67□□□□□ -2.3
SMC4-203ENST00000462668 ALKAL2Q6UX46 152 aa0.67□□□□□ -2.3
SMC4-203ENST00000462668 S100A16Q96FQ6 103 aaKnown RBP0.67□□□□□ -2.3
SMC4-203ENST00000462668 UQCRHLA0A096LP55 91 aa0.66□□□□□ -2.3
SMC4-203ENST00000462668 F8WEM9 126 aa0.66□□□□□ -2.3
SMC4-203ENST00000462668 DEFB108BQ8NET1 73 aa0.66□□□□□ -2.3
SMC4-203ENST00000462668 CADP27708 2225 aa0.66□□□□□ -2.3
SMC4-203ENST00000462668 PSMG4Q5JS54 123 aa0.65□□□□□ -2.3
SMC4-203ENST00000462668 C7orf77A4D0Y5 90 aa0.65□□□□□ -2.31
SMC4-203ENST00000462668 Q5VSD8 79 aa0.65□□□□□ -2.31
SMC4-203ENST00000462668 WFDC2Q14508 124 aa0.65□□□□□ -2.31
SMC4-203ENST00000462668 APLNQ9ULZ1 77 aa0.64□□□□□ -2.31
SMC4-203ENST00000462668 LINC00959A0A1B0GUT2 108 aa0.64□□□□□ -2.31
SMC4-203ENST00000462668 GCHFRP30047 84 aa0.64□□□□□ -2.31
SMC4-203ENST00000462668 ETDBQ3ZM63 59 aa0.64□□□□□ -2.31
SMC4-203ENST00000462668 PEA15Q15121 130 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 A0A087WVE0 104 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 ZNF815PA8K554 130 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 SFTA2Q6UW10 78 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 LINC00643Q86TS7 51 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 ST20Q9HBF5 79 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 ROS1P08922 2347 aa0.63□□□□□ -2.31
SMC4-203ENST00000462668 TRBV7-4A0A0J9YYF1 115 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 M0R3E3 92 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 AKAP6Q13023 2319 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 A0A1B0GWA3 101 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 ACYP1P07311 99 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 H0Y9P7 68 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 IGLC3P0DOY3 106 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 CNFNQ9BYD5 112 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 TRBV6-1A0A0K0K1D8 114 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 H0YGG7 62 aa0.62□□□□□ -2.31
SMC4-203ENST00000462668 ZNF720Q7Z2F6 126 aa0.61□□□□□ -2.31
SMC4-203ENST00000462668 BVES-AS1Q5T3Y7 98 aa0.61□□□□□ -2.31
SMC4-203ENST00000462668 Q6JHZ5 121 aa0.61□□□□□ -2.31
SMC4-203ENST00000462668 WNK1Q9H4A3 2382 aa0.6□□□□□ -2.31
SMC4-203ENST00000462668 IQCF6A8MYZ5 107 aa0.6□□□□□ -2.31
SMC4-203ENST00000462668 COX6A2Q02221 97 aa0.6□□□□□ -2.31
SMC4-203ENST00000462668 SPCS1Q9Y6A9 102 aa0.6□□□□□ -2.31
SMC4-203ENST00000462668 UBE2DNLQ8IWF7 75 aa0.59□□□□□ -2.31
SMC4-203ENST00000462668 FXYD6-FXYD2A0A087WZ82 144 aa0.59□□□□□ -2.31
SMC4-203ENST00000462668 SSBP3-AS1Q7Z2R9 100 aa0.59□□□□□ -2.31
SMC4-203ENST00000462668 SPRR2GQ9BYE4 73 aa0.59□□□□□ -2.31
SMC4-203ENST00000462668 IGLC2P0DOY2 106 aa0.59□□□□□ -2.32
SMC4-203ENST00000462668 PLCE1Q9P212 2302 aa0.59□□□□□ -2.32
SMC4-203ENST00000462668 SMIM11AP58511 58 aa0.59□□□□□ -2.32
SMC4-203ENST00000462668 MYMXA0A1B0GTQ4 84 aa0.58□□□□□ -2.32
SMC4-203ENST00000462668 C18orf32Q8TCD1 76 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 DNAJC13O75165 2243 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 S100A13Q99584 98 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 TP53AIP1Q9HCN2 124 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 SPINK4O60575 86 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 C6orf201Q7Z4U5 140 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 WNK2Q9Y3S1 2297 aa0.57□□□□□ -2.32
SMC4-203ENST00000462668 DEFB112Q30KQ8 113 aa0.56□□□□□ -2.32
SMC4-203ENST00000462668 PRH1P02810 166 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms